Gambusia affinis (western mosquitofish): 122829942
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Entry
122829942 CDS
T07758
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122829942 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122829942 (fip1l1b)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122829942 (fip1l1b)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
122829942
NCBI-ProteinID:
XP_043970807
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Position
LG04:10323211..10332872
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AA seq
553 aa
AA seq
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MSGEEADKTATTDASAGDEEEEWLYGDESETKEEDEEPKLDAAASAPVETSTDDAAAAAV
VVDVHTTGNGVVSESQGEAAGEDVESDSDSDDDDDDVRVTIGDIKTGAPQYTTYGTPPVN
LNIKTTGSRPYGQVTTKVKGVDLDAPGNINGVPVLEVDMESFEEKPWRKPGADLSDYFNY
GFNEDTWKAYCEKQKRLRMGLEVSTIGSVTSKISVQQGRTGNEKDVSSLSVHTSKTDFTS
PVSLYKSAVSQITRKTSGTIDVIGGQTATISRVEGRRRHNLEGNNIQVISEHSTSEAEPA
PAKIPTFFPPGPLPPNIPPPPFLPPPPNVSTAPPLIPPPRLPITVPPPGFHPPTSGPPPS
LIPTMDSSHAGGYDSRSVPPYPFPQGAYPPPLTGGVPPPWPPMVDNSKPWDYYSRREDKR
DKERDRPRERTHEREREREHSPSTMSYTRSEGQIQQCDEERYRYREYQERGYGERHRDRA
SREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASE
DMGADQENQEAME
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggaggaggcggacaaaacagccaccactgacgccagcgccggtgacgaagag
gaggaatggctttatggagatgagtcagaaacaaaagaggaagatgaagaacccaaactg
gatgctgctgccagtgcacctgttgagacttcaacagacgatgctgctgctgctgctgtt
gttgttgatgtacatactacggggaacggagtggtctctgagtcccaaggcgaagctgca
ggcgaggatgtggagagcgacagtgacagtgatgatgacgacgacgatgtcagagttacc
attggtgacatcaaaactggagcaccacaatatacgacatatgggaccccccctgttaac
ctcaacataaagacaacaggatccaggccttatggacaagtaaccacaaaggtgaaggga
gtggatctggacgcaccaggaaacattaatggtgttcctgtgctggaggtggacatggag
agctttgaagagaaaccctggaggaagccaggagctgatctgtcagactatttcaactat
ggttttaatgaggacacctggaaggcttactgtgagaaacagaagaggctgcgaatgggc
ctagaggtctctacaattggctcagtgaccagcaagatctctgttcagcagggcagaaca
ggaaatgaaaaggatgtatccagtttgtctgttcacacctccaagacggactttacgtct
cctgtcagcctgtacaagtctgctgtcagtcagatcaccaggaagacaagtggtactatt
gatgtgattggtggacagacagccacaatcagtagggttgagggacgacgcagacacaac
ctagagggcaacaacatccaggtgatatctgaacattcaacatcagaagctgaaccagct
ccagctaagattcctaccttcttcccccctggaccgcttcctccaaacatacccccgcct
ccttttctccctcctccaccaaatgtcagcactgcacctcctctcatacctccacccaga
ttgcccatcacagttcctcctcctggttttcaccctccaacaagcggccctccaccttct
ctaattcccacaatggacagcagccatgctggaggctacgacagtcgctctgtcccaccg
tacccgtttcctcaaggtgcttaccctccacccttaactggaggtgtgcctcctccttgg
ccccctatggtggacaacagcaaaccctgggactattattcccgtcgggaagacaagaga
gacaaggaacgggaccggcccagagagcgaacacatgagcgcgagcgagagagggagcac
agcccctcaacgatgagctacaccaggtcagaaggacagatacaacaatgtgatgaggag
cggtatcgctaccgtgagtaccaagaacgtggttacggagagcggcatcgtgaccgggca
agccgagaaaaagaggagagacacagagagaggcggcaccgagagaaagaggagggacgt
cacaagtcctctcgcagcagcagcagtcgacgaagacacgacagcgaggagggcgacagc
cacaggagacacaaacacaagaagagtaagaggagcaaggagggcaaagaggctagtgag
gatatgggtgcagatcaggagaaccaggaggctatggagtag
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