Gambusia affinis (western mosquitofish): 122829956
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Entry
122829956 CDS
T07758
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122829956 (pcdh10a)
Cell adhesion molecules [BR:
gaf04515
]
Cadherins
Protocadherins
122829956 (pcdh10a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
122829956
NCBI-ProteinID:
XP_043970829
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Position
LG04:complement(18425061..18449041)
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AA seq
1053 aa
AA seq
DB search
MIWLILLLSILNGALCQLHYSVPEEQEPGTVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALVVKEKIDREEICKQTIPCLLHLEVFLENPLELFRVEIEVMDVNDNPPSF
PEPDIFVEISESAIPGTRFPVENAFDPDVGTNALSTYAITNNNYFSLDVQTQSDGTKFAE
LVLEKPLDREQQAVHRYVLTAVDGGVPQRTGTALLVVKVLDSNDNAPTFDESVYTVNLRE
NSPVGTLVIQLNATDVDEGLNGEIIYSFSSHNTPRIKDLFNIDERTGRIEVAGEVDYEES
NTHQINVQAKDLGANAVPAHCKVLVKLVDVNDNTPEISFSTVTESVSEQHAPGTVIALFS
VSDRDSGENGQMSCEIMGDVPFKLKSSFKNYYTIVTDGSLDRENTDSYTITVVATDKGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVAENNVPGAFIHAVTALDPDIGQNSLITYS
ILECDIQGMSVDTYVSINQDTGYLYALRSFDFEQLKEFSFMVQAKDSGAVELFSNVTVNV
IIVDQNDNAPSVIAPIGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGENARLSYSILRGN
EMGMFRMDWRTGELRTARRISPKRDPQGFYDLLIEVRDHGQPPLSSSASVSVILVDSVVE
GRSGDRGSASKAKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNLYTCLLAG
DCCLCCGSCCSRQSRGRKQKKLSKSDIMLVQSTNVTTGVGPVGQVPVEESGVGSVGGGFG
SHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSNDADHTNPCGAIVTGYSDQQPDII
SNGSILSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNR
GHSAGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDATLPDTEVP
CSVNLSNQLTMTSSTASSNDRSFSTFGKDGQRSQSHHSLQNHLHQQQQQYSSSTLERKEY
DRGTLPYKPTFLCEYQYETSLGPYDFGLVQYRN
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgatttggttaatacttctgctctccattctgaatggagctctatgtcagctgcactac
tccgtgccagaagagcaagagcctggcaccgtagttgggaatatcgcagaagatctaggt
ttggacattaccaaactttccgctcgccggttccagacggtgccaagttcgcggacacct
tatctggaggtgaacttggagaacggcgctctggttgtgaaggagaaaatagatagggaa
gaaatctgcaagcagaccattccgtgcctgctgcacctggaggtgtttttggagaatccg
cttgagctgttccgcgtcgagatcgaggtgatggatgtcaacgacaatccgcccagcttt
ccggagccggacattttcgtggaaatatctgagagtgccatacctgggactcgtttcccc
gtggagaacgccttcgaccccgacgttggcaccaacgcgctcagcacgtatgctataacc
aacaataactatttttccctcgacgtgcagacgcagagcgacgggaccaaattcgcggag
ctggtgctggagaagccgctggacagagagcagcaggcggtccatcgctatgtgctgacg
gctgtggacgggggcgtcccgcagcggaccggaacggctctgttggtagttaaagttctg
gactctaatgacaacgctcccacgttcgatgagtccgtgtacacggttaacctgcgggaa
aactcacccgtggggactctagtcatccagctaaacgccacggatgtagacgagggacta
aacggagaaataatttattcctttagcagccacaataccccacggataaaagacttgttc
aacatcgacgaaagaacgggcaggatagaagttgcgggcgaagtggactacgaagagagc
aacactcaccagatcaacgtccaagcgaaagatctgggggctaacgccgtccctgcgcac
tgcaaagtgctggtcaaacttgtggacgtgaatgacaacacaccggagatcagcttcagc
accgtaactgagtctgtgagcgagcagcacgccccgggcaccgttattgccctcttcagc
gtttcggacagagactctggtgaaaatggtcagatgagctgtgagatcatgggcgacgtc
cccttcaagttgaagtcgtcatttaaaaattactacaccatcgtaacggacggctcgctt
gacagggagaacacagactcatacaccatcacagtcgtggccacagacaaaggtcagccc
tcgctggccaccagcaaatcaattaaggtgcacgtctccgacgagaacgacaacgcgccc
cgctttacgcaggctgtgtatgatgtttatgtggctgagaacaatgtgcctggtgctttc
attcacgcagtgaccgccttggaccctgatataggacagaattctttaattacctactcc
atattggagtgtgacatccagggaatgtctgttgacacttatgtctccataaaccaagat
accggctacctttacgcgctgcgctctttcgattttgagcagctgaaagagttcagcttc
atggtccaggctaaggactcaggtgctgtcgagttgttctccaatgtcaccgttaacgtg
atcatagtcgaccaaaatgacaacgctcccagcgtcatagcccctataggcaaaaacggc
acggccaaagaacacttgccgcgttctgcggagcctggatacctggtgacgcgcatcgtg
gccatggacgcagatgatggcgaaaacgcacgactgtcctacagcatcctgcggggcaat
gaaatgggaatgtttcgcatggactggaggaccggagagctgagaacggcgcgcaggatc
tcccccaagcgggacccacagggcttttacgacctgctgatagaggtgagggaccacggg
cagcctcctctttcctcttccgcaagtgtgagcgtaatactagtggacagcgtggtggag
ggccgcagtggggaccgcggctcggcctccaaggctaaagagacttctcttgatctcacc
ctgattctcatcatcgccctgggctccgtgtcctttatattccttctggccatgatagtg
ctggccgtgcgctgtcaaaaggacaagaagctcaatctgtacacgtgcctcctagccggc
gactgctgcctgtgctgtggctcctgctgcagcaggcagagccgcggtaggaagcaaaag
aagttgagtaaatccgacatcatgctggttcagagcaccaacgtgaccacaggagttggg
cccgtcgggcaggtgccagtggaggagtctggggtggggagcgtgggaggcgggtttggc
tctcaccaccaccaaaaccagaactcctattgctaccaggtgtgcctgacaccggagtct
gccaagacggatctgatgttccttaagccgtgcagcccctcccgcagcaacgacgctgat
cacaccaacccctgcggggcaatagtgaccggctacagtgatcagcaaccggacataata
tctaacggcagcattctatccagtgagacaaaacatcaacgagcagaactcagctatctg
gtggacagacccaggcgtgtcaacagttctgcatttcaagaggcagacattgtcagttct
aaagacagtggtcacggcgacagtgaacagggcgacagcgaccacgacgcaacaaaccgg
ggtcattcagccggtgctgacctgttctccaactgcacagaggagtgcaaggccctgggt
cactctgaccgctgctggatgccgtcctttgtgccatcagatgggcgccaaggaccggac
taccgcagcaatctgcacgtccctggcatggacgccacgctacccgacactgaggtaccc
tgctccgtcaacctatccaaccaactcacaatgacctcctccaccgcctcgtccaacgat
aggtcattctccacctttggcaaggacggccaaagatcacagtcacaccacagccttcaa
aatcacctccatcagcaacagcagcagtacagctccagcacgctggagaggaaagagtat
gatagggggaccctaccgtacaaaccaacctttctctgtgagtatcagtatgaaacctca
ctgggaccctacgattttggtttggtccagtatagaaactaa
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