Gambusia affinis (western mosquitofish): 122829988
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Entry
122829988 CDS
T07758
Name
(RefSeq) calpain-2 catalytic subunit-like isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04141
Protein processing in endoplasmic reticulum
gaf04210
Apoptosis
gaf04217
Necroptosis
gaf04218
Cellular senescence
gaf04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122829988
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122829988
04217 Necroptosis
122829988
04218 Cellular senescence
122829988
09144 Cellular community - eukaryotes
04510 Focal adhesion
122829988
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122829988
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
122829988
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C2: calpain family
122829988
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Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
122829988
NCBI-ProteinID:
XP_043970930
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All DBs
Position
LG04:185442..195247
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AA seq
697 aa
AA seq
DB search
MSGVASTLAKKRALAAGFGTNSNAIRYLNQNFEALRAQCRSSGQLFCDPTFPAEPESLGF
KELGRNSSKTRGVTWKRPTELVSKPEFIVGGATRTDICQGALGDCWLLAAIASLTMNEFV
MARVVPTDQGFGDNYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELLFVHSAEGQEFWSAL
LEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAENYDLNRPPSNLFQIIKKALEAGALLGC
SIDITSAADSEAVTRQKLVKGHAYSLTGAVEVNYRGRQEKLVRMRNPWGQVEWTGAWSDG
SSEWSQVQGDCPHANSEDGEFWMSFSDFQRHYSRIEVCTLTPDTIEDDSVKHWSVSKFDG
TWRRGSTAGGCRNHPHTFWTNPQFVIKLDEEDDDPDDGEVGCSFVVGLIQKNRRKLRQQG
EDMHTIGFAIYEVPPQFHGQREVHLDKNFFLTHAQTARSETFINLREVSSRFKLPPGEYL
VVPSTFDPHQNGDFCIRVFSEKQTETMPCDDPVSADLSDETVSDSEVDSGFRNLFTKLAG
GDMEISAYELQTIMNKIVAKRTDIKTDGFSLETCRVMVNLMDDSGNGKLGIGEFATLWKK
VQKYLSIYKQIDSDNSGTMSTPEMRVAFKDAGFSLNNTIYQQLVARYSDPDMTIDFDNFV
ACLMRLEMMFRIFRKLDAHQSGSIELDLNQWLNFTMI
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagtcgcctccactctggccaagaagcgggccctggccgcggggttcggaacc
aactccaacgcgattcggtacctgaaccagaacttcgaggccctgcgcgcgcagtgccgc
tcctccgggcagctcttctgcgaccccaccttcccggccgaacccgaatctctgggcttc
aaagaactgggtcggaactcctccaagacccgcggagtcacctggaagaggcccacggag
ctggtctcaaagccagaattcatcgtgggcggtgccaccagaaccgacatctgtcaggga
gcgctgggtgactgctggctgctggctgccattgcctctctgaccatgaacgagtttgtg
atggcgcgagtcgttcccacagaccaggggtttggagacaactatgcaggaatcttccac
ttccagttttggcagtttggggagtgggtggatgtggtgattgatgacaggcttccggtt
aaagacggggagctgctgttcgtccactcggcagaaggtcaggagttctggagcgccctg
ttggagaaggcctatgccaaggtgaatggctgctacgaagccctgtctggtggctccacc
actgagggcttcgaggacttcaccggaggcatagcagagaactatgacctcaaccggcca
ccatccaacctgttccagatcatcaagaaggcgctggaggccggcgctctgctgggctgc
tccatcgacatcacaagtgctgcagactcagaggcggtcactcgacagaagctggtgaaa
ggccacgcctactcattgacgggggccgtggaggtgaactaccgcgggcgtcaggagaag
ctggttagaatgaggaacccctggggtcaggtggagtggaccggagcatggagcgatggg
tcttctgagtggagccaggtccagggggactgtcctcacgccaactcagaggacggagag
ttctggatgtcgttcagtgacttccagcgtcactactcccgaatcgaggtgtgcactctt
actccagatacgatagaggacgactccgtcaaacactggagcgtcagcaagtttgacggc
acctggaggagaggctccacggctggaggatgccggaatcacccccacacgttctggaca
aaccctcagtttgtgatcaagctggatgaggaagatgatgaccctgatgacggtgaggtg
ggctgcagctttgtggtcggtctgatccagaagaaccgcaggaagctgcgccaacaaggc
gaggacatgcacaccattggctttgccatctatgaggttcccccgcagttccatggacag
agggaggtccacctggacaagaacttcttcctgacccacgctcagacggcgaggtcagaa
accttcatcaacctgcgggaggtgagctcccgcttcaagctgccacctggagagtacctg
gttgtcccgtccacctttgaccctcaccaaaacggagacttctgcatccgagtgttctcc
gagaagcagaccgagaccatgccctgtgacgacccggtcagcgccgacctcagtgacgag
acggtgtcggacagcgaggtggactccgggttcaggaacctgttcactaaactcgcggga
ggcgacatggaaatctccgcctacgagctccagaccatcatgaacaagatcgtagccaaa
cgaactgacatcaaaacagacggattcagcctggagacctgcagggtcatggtcaacctg
atggacgacagcgggaacggcaagctgggcatcggggagttcgccacgctgtggaagaag
gtgcagaaatacctgtcgatctacaagcagatcgactcggataactctggaaccatgagc
actccggagatgagggtggccttcaaggacgcaggtttctccctcaacaacaccatctac
cagcagctggtggcccggtactcggacccggacatgaccatcgacttcgacaactttgtg
gcgtgtctgatgaggctggagatgatgttcaggatcttcaggaagctggacgcccaccag
agcggctccatcgagctcgacctgaaccagtggttgaacttcaccatgatctga
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