Gambusia affinis (western mosquitofish): 122830105 Help Entry 122830105         CDS       T07758                                  Symbol dchs2 Name (RefSeq) protocadherin-23   KO K16507   protocadherin-16/23 Organism gaf  Gambusia affinis (western mosquitofish) Brite KEGG Orthology (KO) [BR:gaf00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:gaf04515]     122830105 (dchs2) Cell adhesion molecules [BR:gaf04515]  Cadherins   Cadherin related    122830105 (dchs2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_2 RET_CLD1 Fibulin_C Cadherin_4 CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  122830105 NCBI-ProteinID:  XP_043971112 LinkDB All DBs Position LG04:30089570..30119070 Genome browser AA seq 3270 aa AA seqDB search MGGRNAPVALLQVFLLALFSAQSLGRVFNLTLSVKEGLPAKTIVGDLGAVLSAPSTGFFI SESRDSYVFRDLEIDADTGIISTVAGLDRESRDHYEFVAATLTGEMIRVRIKVEDVNDHS PVFPSKEVELGISELSPPGSRFPLEGAADRDEEEFSTRGYRIRESEMEELFHLDFRIGSE KQHSLDLVLNSRVDRETKDFYTLTIEAFDGGIPARTGTVQVDIRILDENDNPPVFNQSEY HSLVREDAPIGSIVCQVLASDSDLGDNSRITYEINRRQSDPNHVFSINETTGFIYLNKPL DFEIQPFHELIVRARDDGAQPEDSSTFVGVKVLNINDNSPTISVLFLSETGEAVVSEAAA VGEYVARISVSDPDLEEHGITVSLAGGDGKFTLKQTDDFLYALCVNSELDREEKDLYELK VQASDSGSPPLSSETLLLLKVSDANDCQPVFEQDVYTVSIAEDAPEGSSLIRTRARDADE GVNSNIRYSILKSHQDGLVTIDPTSGLVTTAAGLDRETQMEVWFLVLAEDGGEPSLSSTA TVTVLVEDVNDNEPVFQQQLYNVSIPEHMDAGSCFLQVVATDADSPEFGALLYSLSDGFD SQESHPLFQINQHTGELCVSQDIDRDDGMSVHDILIKAEDPGGLSAQSYVHIEIQDLNDN PPVFSPEEYTVSVSSHAPPGSEVVNVIATDQDSGQFGQITYKIHPGDMSSLFTLDRHTGM LFLNSSLTHLGAASMKLLITAQDGDGLSSARPAEVTINVVQSGQAPAVFQRSRYAFTVPE DAPLGTSVGTVEASSLSDATEPVSYRISSGNIYSWFSVHPKSGVINTIKPLDHESQPYAL LFLQSYTDTSPIYSTTQVNITITDVNDNAPVFPKRRDTITVSRSTRPGTVLFIAHAHDRD SGANGLVQYHLKSSRNEVFAIDSNLGTVRLNKSLQVSQQQRYNLEILAKDEGKPSLSSTL TLSVNIDHTAADDSVAFETLVYQVEIGEGYRKDSRVIQVRAHRTRGSHTSNSGLTYSLEA EAGLPPPPFRIHSKSGWLYLSSNLDFETESRYRFQVLSTSGEASLANVTATAMVTVLVLD VNDNPPVFSSDVYYFTVSEGSSPQGLVGTVKAKDKDSGKNSQLSYILLSDGKYFRINAKT GEIINWVALDREQHSQHSLTVMVTDQGLPRLNATANVHVLVTDINDNTPQFNHLPSSKEL NVPIWAGIPAGFLVTNMFAKDLDAGENGTVTHSLVTVGSEENGLRHFEIDSKNGDIRTTQ LFSQRTEPFYTLKITARDAGAPSLEDTAVVHIQVYGLEDQYGTSDHQAVRHFSVREDAEP ATVIGSVSVSDKGRFQYSIAEGDGSIFFGIDGTSGDIYVNQLLDYESAKQYFLVARVEDV GASVGLNISVLVSVTVEDVNDHAPWFPDKLLMFGLREDAAVGSLAFAFHARDADGTFANS ALRYTLTFDPEVSGTPPHFPFHMNSHTGAMTVAAPLDRESTPTFVFTVTATDQAERTDER KQTSVTVRLLLLDVNDNRPVFVSAHSVQLMEDTEVGSLLHHFIAIDGDQGENGLISYSIV NGNKKGFFTLEEKTGLLFLSAPLDYETQRVHRLTVRAADQGVPCLSSTQTLTVEVGDVND QPPIFSQTTYVTSVVENKGPGEPLLRVSASDMDSEDNAVVWYSLLPGPGYELFSINPYTG LITTTTHLDREQEQHFTLRVQARDSGFRPLSGTATVLCSILDDNDNPPEFMQPLFQISLP ENLSPGVIHTVLASDPDLGENGTIHYSVLGEDYGGRFTISSETGAISTMQALDREEIQNY TLTIQAQDSGPAPLSSTTQLLLLLLDQNDNAPSLSPESYHASISEGLPSGAEVLQLTAFD PDEGPNGEVTYTLTDDNSQGAFSVDPFTGVVRTTRSLDRESRTLYTLKAVATDGSTQGPL SSVASLTIQVDDVNDNVPVCDQNPLHAWVSMRTQPNQIVTTVVATDADQGENGTVQFKFL AEESLFDINSASGEISLRRRVRAGFSGRKLEVLVSDRGRPPLTATCLVLVHLKGEHDGLQ FTNKVYNATIKENSRAGTWITKVEASDDTNSRQRITYTMFSGNENAAFSINRYTGEIRVQ KENSLDFEASPQIQLVVLADSGLHTAHCRVSVTLLDVNDNAPLFELSNYRTAVWEGQVRN TYIMQVFASDADSGENGQIEYSILSGNINEAFILDSVRGILATNVLLDREITPSYRLILQ AADKGKPPLSSTATVRVQVVDVNDNSPAIPPMEPIYIYENLPAGYVVTQVTANDVDLGST ITYSFSNSSITSDPFAIDRYTGVITLTRPLDYEAETEFTLRVSALDSLHQTSGQVKVQVL DANDNSPVFTQVSYQVEVSELVSADTLVVNVVATDRDSGLNGKISYRLLSSPPHAFYIQK DNGSIFTNEPLRTITNSNMLHLLVEARDEGEPVRSTVTSVALVVVDANDHKPLFHQDIYT LTTAEDTPPETTLLTISAQDEDWSPENTHLDYAIVGGNEEKRFCLEVKKIPVENQMKNVG RLVLCNPLDRETTEFYELTVSVSDRGTPPLNSSSIIKVTVTDCNDNAPVFSSAEYHAEVS ESSQIGTSLVHVSALDPDLGVNGLVHYEIISGNSKGHLKLDPQSGILMINQSLDYEEDLR YILTIRATDGGQASDNQNMAFAVIYVNVLDENDNTPFFMFPSVTCSVLENLPAFTHTCSV HAIDKDSGPYGLLTYSILSSCFMDYGSGSPERKEAFAIDALSGDIHTRQTFDYERESEYC FVVEAKDKGDKSATVRVQVAIKGVDEFSPIFTQKQYHFLLPENPKTGETVGFVMAMDHDG GVDGLVEYSLLTPTPFFSINKTIGAIFVSGPVYRRRISHASEDLVELVVSAGSPRLGSRT TTCLVFVNISSSAEALIGVQLDSHIFSLSVSLLLFLFVLVIFVGLVLRCKVKEAVLKKAS AIAAQLNHGTDSSGESNSQMHSDVSLQELTQVGGFVAKSDVSNPCTQSDSSGRGSAEGET AEDQEIKWINEFPCYKREKVNKLTTEFLNSTISVDKISSHSVDVGPEHIFSLTKSLAQGI ASTESLNHFKEEGGGEGLLPAILRVKDLEDSMGIRGYAPLSKAQASADSLTSLVCLEEPL EGSYSWDFLLDWEPRFHSLAAVFTDIGMLPDEELQGGREDFATESSSLMYPPPLITGVAQ PGIRTVPPRKPGRVPTLSRKSSYPKYAYSPLARNTGLTPSAMTPTFTPSLSSLTLRTPSS SPVVSDTGVGGIRLDSGPQTASLLEAEIQV NT seq 9813 nt NT seq  +upstreamnt  +downstreamnt atgggcggaaggaatgcgccagttgcgctcctccaggtcttcctcctggcgctgtttagc gcgcagtcgctcggacgggtcttcaacctgacgctgtccgtgaaggagggcctgcccgct aaaaccatcgttggagatctgggagcggtcctgagcgcgccgagcaccggcttcttcatc tcagagagcagagactcgtatgtgttcagagacctggagatagacgcggacacgggcatc atctccacggtggcgggcctggacagggaaagcagagaccactacgagttcgtggcagct actctcacaggagagatgatacgggtgaggataaaggtggaggacgtgaacgaccactca cctgtgtttcccagtaaggaagtggagctgggaatctcagagctgagcccaccgggaagt cgctttccgcttgaaggcgcagcagaccgggatgaggaggagttcagcacgcggggatac aggatcagagagagcgagatggaagaattgttccacttggattttcgaatcggatctgag aagcagcacagcctggatctggtcctgaacagcagagttgacagagaaacaaaggacttc tacactctgaccattgaggcctttgatggggggatcccagccaggactgggacagtccag gttgacatccgcatcctggatgagaacgacaatcctcctgtgttcaaccagagtgaatac catagcttagtacgtgaggatgctcccatcgggtccattgtctgtcaggtgctggccagt gacagtgacctgggtgacaacagcaggatcacttatgagatcaataggcgccagagtgac cccaaccatgtgttctccattaacgaaaccacaggatttatttatctaaacaagccgctg gattttgaaattcaaccgtttcacgagctgattgtcagagccagagacgacggtgctcag cctgaggacagcagcacttttgttggtgtcaaggtgcttaacatcaacgacaacagcccc accatcagtgtgctgttcctcagtgagacaggagaagctgtggtgtcagaggcagccgcc gttggggaatacgtggcccggatttctgtgtcagacccagacctggaggagcacggaatc accgtctctcttgcgggaggagatgggaagtttaccctgaagcaaacagatgattttctg tatgcgttgtgtgtcaactctgagctggacagggaagaaaaggatctgtatgagctgaag gtgcaagcatctgattctggaagcccccctctgagcagtgagacgcttctcctcctgaag gtgtctgatgccaacgactgccagccggtctttgaacaggatgtgtacactgttagcatc gctgaggatgctcctgaggggagctccctcatacgaacgagggcccgggacgctgatgaa ggtgtcaactcaaacatcagatactccattctgaagtcacatcaagacggcctggttacc attgacccgacctctggcctggttaccacagccgcaggcctcgacagggagactcagatg gaagtgtggttcctggtgctggcagaggacggaggggagccatctttgtcgtctacagct acagtcacagtgctggtggaggatgtgaatgacaacgagccagtgttccagcagcagctg tacaatgtgtccatacctgagcacatggatgctggaagctgcttcttacaagttgttgcc acggacgcagacagccctgagtttggcgctctgctctactccctgtctgatggatttgac agtcaggaaagtcatcctctttttcaaatcaatcaacacacaggagagctgtgtgtctcc caggatatcgatcgggacgacgggatgagtgtccatgacattttgatcaaagctgaagat cctggaggtctgagtgctcaatcatatgttcatattgagatacaagacttaaatgacaac cctccagtgttcagccctgaggagtacaccgtgagcgtcagcagccacgcaccgcctggt tccgaggttgtcaacgttatcgctacagaccaggactctggccagttcggacagattacc tacaaaattcatccaggagacatgtccagtttgtttacactggatagacacacaggaatg ctctttttgaactcttctctgacacacttgggtgcagccagcatgaagctcctaataaca gcgcaggatggagatggcttgtcttcagccagacccgcagaggtcacaatcaacgttgtc caaagtggtcaggctccagcggtgttccagaggtcgcgctacgccttcacagtgcctgaa gacgcaccgctgggaacatctgtgggaacagtggaggccagcagcctgagcgatgctaca gagcccgtttcttaccgaatctcttctggaaacatttacagttggttttctgtccatcca aagtctggtgtgattaataccattaaacctctggaccatgagtctcagccttatgccctg ctgttcctccagtcctacacagacacttctcctatttacagcaccacccaggtcaacatt acaatcactgatgtcaatgacaatgcccctgtgtttcccaagaggagagacaccatcact gtttctcgaagcactcggcctggaacagtgctgttcatcgctcacgcacatgaccgtgac agcggtgccaatggcttagtgcagtatcatctgaaaagcagcagaaatgaagtgtttgcc attgactcaaaccttggaacggttagacttaataagagcttacaagtgagccagcagcaa agatacaacctggaaatcttggcaaaagacgaaggaaaaccttccctgagctccaccctg accctttcagttaacattgaccacacagctgcagatgacagcgtggcctttgagacgctg gtctaccaggtggagataggggaaggctaccgcaaagactcccgcgtcatccaggtgagg gcgcaccgcacccgagggtctcacacgtcaaactcaggtctcacttactccttggaagca gaagctggactccctccgcctccttttcgcatccactcaaaatctggatggttgtatctc tccagcaatcttgactttgagaccgagtcaagatatcgttttcaggtgttgtccacctcc ggagaggcttcactggccaatgtcacagcaacagcaatggtgactgtactggtgctggac gtcaatgacaatcccccagtgttcagcagtgatgtgtactacttcactgtatcagagggg tcatctccgcaaggcctggtgggaacagtcaaagccaaggataaggattctgggaagaac agccagctgtcctacatcctcctctcagatgggaaatacttccgcatcaatgctaaaaca ggtgaaatcatcaactgggtggcgctggaccgggagcaacacagccagcacagcctgacc gttatggtgacagaccaaggtctccctcgtctcaatgccaccgccaatgttcatgtcctg gtcactgacatcaatgacaacactccacagtttaatcatctgccttccagcaaagagctg aatgttcctatatgggcaggcatacctgcaggattcttggtgaccaacatgtttgccaaa gacttggatgctggagagaatggaaccgtcacccattcactagtaacagttggatcagag gagaatggtctcaggcactttgagattgacagtaaaaatggagacatcagaaccacgcag ctcttcagtcagaggactgaaccattttacactctgaagataacagccagggatgctgga gccccatctctggaggatacagcagtggttcacatacaggtttatgggttggaggatcag tacggcacctcagatcatcaagcagtgaggcatttctcggttagggaggacgccgagcct gcaacggtcatcggctctgtcagtgtttcggataaaggcaggtttcagtatagcatcgcc gagggagacgggagcattttctttggaatcgacggcacgtctggcgacatctacgtcaac cagctgctggactacgagtctgccaagcagtacttcctggtggctcgagtggaagacgtc ggtgcatctgttggtttgaacatttccgtgctggtgagcgtcacggtggaggacgtgaac gaccacgctccctggttccctgataaactgctgatgttcggtctgagggaagatgccgcc gttggatcgctggcctttgcttttcatgccagagacgctgatgggacttttgcaaacagt gcccttcgctacactctgacctttgaccccgaagtcagtggaacacccccacacttcccc ttccacatgaactcacacacaggtgcaatgacagttgcggcacctttagaccgcgagagc acgccaacatttgttttcactgtcaccgccacagaccaggcagagaggacggatgagcgt aaacagacatcagtgacggttcggctcctcctgctggacgtgaacgataaccggcctgtg ttcgtgtctgctcactcagtgcagctgatggaggacacggaggtgggcagtctgctgcac cattttatagcaatagatggtgatcagggggagaatggattgatctcctattccattgta aacggaaacaagaagggattcttcacactggaagagaaaactggccttttgtttctctct gcccctttggactatgagacccagcgtgtccaccgtctgactgtccgagcagctgaccag ggcgtcccctgtctgtcctccacccagaccctgacagtggaggtgggagatgttaatgac cagccccccatcttcagtcagaccacctatgttaccagtgtggtggagaataaaggccct ggagagccactgctcagagtctctgcctctgatatggattcagaggacaacgccgtggtg tggtacagcctgctgccgggccccggctacgagctgttcagcatcaacccgtacactggt ctgatcaccaccaccacccacctggaccgagaacaggagcaacatttcaccctcagagtc caggctcgggacagcggtttccgtcctctgtcggggacagccacggtcttgtgttccatc ctggacgacaacgacaaccctccggagtttatgcagccactgttccagatcagcctgcca gaaaatctttctcctggagttatacatacagttcttgcctctgaccctgatctgggagaa aatggcactattcactactctgtactaggtgaggactacggaggccgattcacaatcagc agtgagaccggagcgatcagcaccatgcaggctctggatcgggaggaaattcagaactac actctcaccattcaggctcaggattcgggccccgctcctctcagctccaccacgcagctt ctccttctcctgctggaccagaacgacaacgcgccctccctcagtcctgagagttaccac gcctccatcagtgaaggcttaccgtctggggctgaggtcttgcagctgaccgccttcgat cccgacgagggacccaacggagaagtaacctacaccctgacagacgacaacagccagggg gctttttccgtggaccccttcaccggagtggtccgcaccaccaggtctctggacagggag agccggactctgtacaccctgaaagctgtggccacagacggctccactcagggcccactg agctctgtggcttcactgaccattcaggtggacgacgtcaacgacaacgtgcccgtctgt gaccaaaacccacttcatgcctgggtctccatgaggacgcaaccaaatcagatagtgacc acagtggttgctacagacgctgaccagggtgagaacgggacggtccagttcaagttttta gccgaggagagtctgtttgacatcaactccgcttcaggagagatttcactcaggaggcga gtgagagccggtttctccggcagaaagctggaggtcctggtctcagaccgaggacgtccc cctctgaccgccacctgcctggtgttggtccatctgaagggagagcatgacgggcttcag ttcacaaacaaagtgtacaatgctaccatcaaggagaacagcagagcaggtacttggatt acaaaagtggaggccagtgacgacaccaacagcagacagaggataacttacaccatgttt agcggcaacgagaatgcagcgttctccataaaccgttacacaggtgagatccgagtgcag aaggaaaactccctggacttcgaggcgagccctcagatccagctggtggttctggccgac agcgggctgcacacggcccactgcagggtctccgtcacgctgctggatgtcaacgataac gcaccgctgtttgaacttagcaactacagaacggctgtttgggagggacaagttcgtaac acctacatcatgcaggtgtttgcctctgatgctgacagcggtgaaaatggacagattgag tattccatcctgtcaggcaacattaatgaagctttcattctagactctgtgagagggatc ctggctaccaacgttctgctggaccgtgaaataactccctcttacaggctgattctgcag gcagcagacaaggggaagcctccactgagcagtactgccaccgttagagtccaggtggtg gacgtcaatgacaacagcccggccatcccacccatggagcccatctatatatatgaaaat ctaccagcaggttatgtggtcacccaggtgactgcgaatgatgtggacctcggttcaacc atcacctacagtttttcaaacagcagcatcaccagcgacccattcgctattgaccgctac acgggtgtcatcacgctgacccgacctctagactacgaggccgagacggagttcactcta agagtgtctgcgttggactcgctccatcaaaccagcggacaggtcaaagttcaagtattg gacgccaacgacaacagtccagtcttcacacaggtttcctaccaggtggaagtctcagag ctggtctcagctgacactttagttgtgaatgttgttgctactgacagagattctggtctc aatgggaagatcagctacagacttctctcttctcctcctcatgcattctacatccagaaa gataatggttctattttcaccaacgagcctttaaggaccatcacaaacagcaacatgctc catcttctggttgaggcaagagatgagggcgaacccgttcgatccacagtcacctctgtg gccctggtggtcgtagacgcaaacgaccataaacctttgtttcaccaggatatttacaca ctcaccactgctgaagatacacccccagaaaccaccctgctcacaatttctgcacaggac gaagattggagcccagaaaacacccatttagactacgccatcgtcggtggaaatgaagaa aagcgattctgtttagaagtgaaaaagattcccgttgaaaatcaaatgaaaaatgtcgga aggctggttttgtgtaatcccttggaccgtgagacaactgagttttatgaattgacagtt agcgtttctgatcgaggaacgcctcccctgaacagctcatcgatcattaaagtgactgtt actgactgcaatgacaatgctccggtcttctccagtgcagagtatcatgcagaggtgagt gaaagcagccagataggaaccagcttggtccacgttagtgctctggatcctgatcttggt gtcaatggccttgtgcattatgaaattatttctgggaacagtaaaggtcacctcaagctg gacccccagtctggtattttgatgatcaaccaatcacttgactatgaggaggatttaagg tatatcctcaccatcagagctactgatggggggcaggcatcagataaccaaaacatggct tttgcagtcatctatgttaacgttctggatgagaatgacaacactccattcttcatgttc ccctcagttacctgctcagtgctggaaaacctcccagcattcacccatacatgctctgtc cacgctattgacaaagactctggcccctatggcctgctgacctactcaattctgtcctct tgcttcatggactatggtagtggaagcccagagaggaaggaggcctttgccattgatgcc ctgagtggcgacattcacaccagacaaacatttgactatgaacgtgagagtgagtactgc tttgtagtggaggccaaagacaaaggtgacaaatcagctacagtaagagtccaagtagcc ataaaaggagttgatgagttcagtcccatcttcactcagaagcagtaccacttccttctt ccagaaaatcccaagactggggagacagtcggttttgtgatggcaatggaccatgatgga ggagtggatgggctggtagagtactcacttttgactccaacaccatttttttcaattaac aaaacaattggagctatctttgtgtccggtcccgtgtatcgcagaagaatcagccatgca agcgaggatctggtggaactggtcgtgtctgcaggtagtcccagattgggttccagaaca acaacttgcctggtttttgtcaatatctccagctcagccgaagcacttattggagttcag cttgattcccacatatttagtctgagtgtgtcactgcttttgttcctctttgtcctagtt atctttgtgggcttggttctcagatgtaaagttaaagaagctgtcctgaaaaaggcctct gccattgctgcacagttgaaccatggtactgactcatctggtgaatcgaacagccagatg cacagtgacgtttccttgcaggagttgacacaagtcggaggttttgttgcaaagagcgac gtctctaacccatgcacccaatcagattcaagtggccgtggatcggcagagggtgagaca gctgaggatcaggaaatcaagtggatcaatgagtttccctgttataaaagggagaaagtc aacaagcttaccacagagtttctcaactccaccatatcagttgataagatctcctcccac tctgttgatgtagggccagaacatattttttctcttactaaaagtttagcacagggcata gcaagcacagaaagtctcaatcatttcaaagaggagggtggaggggaaggattactgcct gcaatacttagagttaaagatttagaggattccatggggataagagggtatgcccctctc tccaaggctcaagcttctgcagattctctgacttcactggtgtgccttgaagagccactg gagggcagctacagctgggatttccttttagactgggaaccacgctttcactctctggct gctgtgttcactgatataggtatgcttcctgatgaggagcttcaaggaggccgtgaggac tttgctacagagtcaagttctctcatgtacccaccgcctctcataaccggagtggctcag ccaggcattaggactgttcctccaagaaaacctggacgagtaccaaccctgagcaggaag tcttcctaccccaaatatgcttattctccattagccaggaatacaggactcaccccgtca gctatgacacccactttcaccccgtctctgtcctctctcacccttaggacccccagctcc tcaccagttgtctcggacacaggagttggggggattagactcgactcagggccccagact gcaagtcttttggaggctgaaatccaagtgtag

DBGET integrated database retrieval system