Gambusia affinis (western mosquitofish): 122830169
Help
Entry
122830169 CDS
T07758
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122830169 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122830169 (sart1)
04121 Ubiquitin system [BR:
gaf04121
]
122830169 (sart1)
Spliceosome [BR:
gaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
122830169 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
122830169 (sart1)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122830169 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
122830169
NCBI-ProteinID:
XP_043971243
LinkDB
All DBs
Position
LG04:complement(29382744..29385716)
Genome browser
AA seq
771 aa
AA seq
DB search
MGSSKKHKEKSRDKDAEDRRREHKKHRHKERERDVSDRDKDRRKRSRSREKSRRESHSKT
ERGAGEPRVKREKVDPGYEESGAEIQPQSTSGDASLSIEETNKLRAKLGLKPLELNEGKK
ELGTKEAPMVAETINPVLIRQQKEMREKLAAMKEKRLLNQKLGKVKAIGDDDWLDDTAGW
VERSRKLAKEKEMAEKRAKLLEEMDEEFGVSSLVEEEFIQSKRDSYSSQDLKGLKVQHKV
DSFTEGQTVVLTLQDKGVLEEKEDVLVNVGLVDKEKAEKNVELKKKKPDYKPYEEEESVD
DMVTFKQHTVLSKYDEEIEGEKKKSFRLGSWGFADGERERELQVMKETLRNQAQSLDMPA
LTIASEYYTPQEMVGFKKTKRKVKTIRKKEKVTISDELLDDTRTSDFGSRARGRGRKQAE
EEQRESKEKVKDGGSWPHELPQMSDDIRTAEMDISDEDNYVPPEPTVIEEDEAEQELQKQ
LEKQRKLRQKQLLKDSGEKVAAQIKVLAKDDDDHDPEKKNNIVFNATSEFCRTLGDIPTY
GLSGNREDQEDIMDFEHEEEKDDGGGSDSEIDENVGWSTVNLDEEQQQVDFSTASATILD
EEPIVNSGLAAALKLCTNKGLLDTQMQKVARVKAPKAALPNDNYCIEDKMGFDDKYSRRE
EYRGFTQEFKEKDSYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTEKRMKK
LEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANNITK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttctaaaaaacacaaggaaaagagccgcgacaaggacgcagaggatcgtcgt
cgcgaacataaaaaacatcgtcacaaggagagagaaagagatgtatcagaccgtgataaa
gacagacgaaagcgctccagatccagagaaaagagcaggcgggaaagccacagcaagacc
gaaagaggcgccggggagccccgagtaaagagggagaaggtggaccctggttatgaggag
agcggcgcggagatccagccccagagcaccagcggagatgcctccctcagcatcgaagaa
acaaacaaactgcgcgctaagctgggcctgaagcccttggagctgaacgagggcaagaag
gagctggggaccaaggaggcgccgatggtggcagaaaccatcaaccccgttctgatccga
cagcagaaggagatgcgagagaagctcgccgctatgaaagaaaagcgcctgctcaatcaa
aaactgggtaaagtcaaagcaatcggcgacgatgactggctggacgacacggccggttgg
gtggagagaagcaggaagctggccaaagagaaggagatggcagagaaaagagccaagctc
ctggaagaaatggacgaagagtttggagtcagcagcctggtggaggaggagtttatccaa
agcaagcgggattcttattcatcacaagatctgaagggtctcaaagtgcagcacaaggtg
gactccttcaccgagggccagaccgttgtcctgaccctgcaggacaaaggtgtgctggaa
gagaaggaagatgtgctggtaaatgtgggattggtggacaaggagaaagctgaaaagaat
gtggagctgaagaagaagaagcccgactataagccctatgaggaagaagagagcgtggac
gacatggtcacctttaagcagcacactgtgctctcaaagtatgatgaggaaatcgagggc
gagaagaaaaagagcttccggttgggcagctggggctttgcggacggggagcgagagcgt
gagcttcaggtgatgaaagaaacgctgcggaatcaggctcagtccctggatatgcccgct
ctcaccatcgcctccgagtactacacccctcaggagatggtcggcttcaagaagacaaag
cgcaaagtcaaaacgatcaggaagaaagagaaggtgacgatctcagacgaacttctggat
gacactcgcacctccgacttcggctcaagggcgcgaggcagaggccgcaaacaggcggag
gaggagcaacgggaaagcaaagagaaagttaaagatggcggcagctggccgcacgaactg
ccccaaatgtccgatgacatcaggacggcagagatggatataagcgatgaagataattac
gttcctcctgagccgactgtgattgaggaggacgaggcggagcaggagctccagaagcag
ctggagaagcagaggaagctgaggcagaagcagctcctcaaagactctggggagaaggtg
gcagcgcagatcaaagtcctggctaaagacgacgacgaccacgatcccgagaagaagaac
aacatcgtcttcaacgccacctcggagttctgcagaactctgggggacattccgacgtac
ggactgtctggaaaccgggaggaccaggaggacatcatggactttgagcacgaagaagaa
aaagacgacggcggaggttcagattctgaaatcgacgagaacgtcggatggagcaccgtt
aacctggacgaagagcagcaacaggtggacttctccacggcctcggccaccattctggac
gaggagcccatcgttaactccggcctcgcggctgcattgaagctgtgcaccaacaaaggc
ctgctggacacccagatgcagaaggtggcccgcgtcaaggcaccgaaggcggccctgccc
aacgacaactactgcatcgaggacaagatgggcttcgacgacaagtacagccgcagagaa
gagtacagaggcttcacgcaggaattcaaagagaaggacagctataagcccgacgtcaag
atcgagtacgtggacgagtccgggcggaagctcacaccgaaggaagctttcagacaactg
tctcaccgattccacgggaagggttctggaaagatgaagacagagaagaggatgaaaaag
ttggaggaagaggcgctgctgaagaagatgagcagcagcgatactcctctcgggacggtg
gctttgctccaggagaagcagaaatctcagaaaaccccgtacatagtacttagtgggagt
gggaagagcatgaatgcaaacaacatcactaaatga
DBGET
integrated database retrieval system
