Gambusia affinis (western mosquitofish): 122830173
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Entry
122830173 CDS
T07758
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122830173 (slit2)
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Axon guidance molecules
122830173 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
Laminin_G_1
LRR_9
LRRNT
LRRCT
EGF_TEN
LRR_1
hEGF
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
Laminin_G_3
LRR_EndoS
EGF_Teneurin
EGF_3
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
122830173
NCBI-ProteinID:
XP_043971250
LinkDB
All DBs
Position
LG04:8326535..8431534
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AA seq
1572 aa
AA seq
DB search
MVGAVRSVGLGRSLETAPRLLLLGTVLVLVLISRADSQPCPPQCSCTGTTVDCHGQGLRS
VPRNIPRNTERLDLNANNLTKITKGDFAGLRHLRVLQLMENKITTIERGAFQDLKELERL
RLNRNNLAVFPELLFLGTTKLHRLDLSENQIQGIPRKAFRGAVEIKNLQLDYNHISCIED
GAFRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRP
RLGLYTQCMAPPHLRGHNVAEVQKKEFVCTDAEEGHQSSSSSSCSVLQCPESCTCSNNIV
DCRGKGLTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAF
QGLRSLNSLVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLY
DNKLQTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLA
NKRIGQIKSKKFRCSAREQYFIPGNEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKL
SKIPDHIPQYTTELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRISDIEEGTFEGALGV
NELILTSNRLENIHHRMLKGLGGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITS
MNPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQNPYFLKEIPIQD
VAVQDFACEDGNNENSCSPVLRCPAECSCLDTVVRCSNKGLTTLPKGLPKETTELYLDGN
HFTQVPVELSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGL
KSLRLLSLHGNDISLIPEGAFKDLSSLSHLALGANPLYCDCHLQWLSDWVKSGYKEPGIA
RCAGPGDMTDKLLLTTPSKKFTCTGPVDLSIQAKCDPCLSSPCKNDGTCSGDPVHYYRCT
CPYGFKGQNCEEPIHACISNPCQNSGTCHLKEGDGSHFWCVCPEGFEGDTCEINIDDCED
NDCENNSTCVDGINNYTCMCSPEYTGELCEEKLNFCTPELNPCQHDSKCILTPRGYKCEC
TPGYVGEQCELDYDDCEENKCQNGGHCIDAVNGYTCICPEGYSGLFCEFTPPMVLPRTSP
CDNHDCLNGAQCVVVGTDPRCQCLHGYEGEHCETLVSVNFVNRESYLQLPSNLLSPQTNI
SLQIATDEDSGVLLYKGDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGSFHSVE
LVAADQTLSLSIDGGPPKSISSISKQSTLNLDSPLYLGGMPEQASVSGGLSALQLSSGGR
NGTSFHGCLRNLYINGKLQNLGAGHDQSSPGPGTLQSYRQWLGNGVEPGCQPCRRGACVQ
GDCHPTGHQGFTCTCHPGWTGALCDQQVSNPCDGNKCIHGTCLPINSYSYSCVCQPGFAG
VLCDVQDLDTANPCSLSRCKHGKCRVSGLGKAYCECNSGYTGEACDREVACRGERVRDVY
QRQQGYAACQTQEKVSRLECRGSCPGGAEGQGTCCTPLRSKRRKYTFQCTDGSSFVQEVE
KVVKCGCTKCSS
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctgtgcgctccgttggccttggccgctccttggagactgcaccgaggctt
ctgctcctggggaccgtcctcgtcctggtcctgataagcagagcagacagtcagccgtgc
ccgcctcagtgttcctgcaccgggaccacggtggactgtcacggccaaggactgcggagc
gtgcccaggaacataccccgaaacactgaacgactggatctgaatgcaaacaacctcact
aaaatcaccaaaggggattttgcaggactgaggcatctgagagtcctgcagttgatggag
aacaaaatcaccacaattgagagaggagcgttccaggacctgaaggagctggagagactc
cgcctgaatcggaataatctggccgtgtttcctgagctacttttcctgggaacgacaaag
cttcacagacttgacctgagcgaaaaccagatccagggaattccaagaaaagcattcaga
ggagctgtggaaatcaagaacctacagttggactacaaccacattagctgcattgaagat
ggagctttcagagcgttacgtgacctggaagtgctcactttgaacaataacaacatcagc
cggctgtctgtggccagtttcaaccacatgccgaagctcaggactttccgccttcactcc
aacaacttgcagtgcgactgtcatgtagcctggctgtccgagtggctacgacagcgcccc
cgcctgggcttgtacacacagtgcatggcccctcctcacttgcgggggcacaacgtggct
gaggtgcaaaagaaggagtttgtgtgcacagatgcagaagaaggtcatcagtcgtcatca
tcttcctcctgcagtgtgctacagtgcccagagtcctgcacctgcagtaacaacattgtg
gactgcagaggaaagggtctgacagaaatacccaccaacctgcctgaaaccattactgag
atacgactggagcagaacgccatcaaggtgatcccagctggggccttttctccttataag
aagctacgcagaatagatttaagcaacaaccagatctcagaattagcctcagacgccttc
cagggtctgcgatcccttaactctttggtcctctatgggaacaaaatcactgagatttcc
aagggactcttcgaaggactgttctcactgcagctattgttgctaaatgctaacaagata
gcatgtctgcgggttgacgcatttcaggaccttcacaacctcaatctgctctctctgtat
gacaacaagctccagaccattgcaaaggggacgttctcctctctaagagcaatacaaaca
cttcatttagctcaaaacccatttatctgtgactgccatctgaagtggctggctgactac
ctgcaggacaatcccattgagacgagcggcgcccgctgcaccagccctcggcggctcgcc
aacaagcggatcggccaaatcaagagcaagaagttccgctgctcagctagagagcagtat
ttcatcccaggtaatgaggattaccgcagcaagcttggaggtgactgcttcgccgacctt
gcctgccctgagaagtgccgctgtgagggcacgacggtcgactgctccaaccagaaactg
agcaaaatccccgatcacattcctcagtacaccaccgagctgcgtctgaacaacaatgag
ttcacggtactcgaggcaacggggatattcaagaagttgcctcagctaaggaagattaat
ctgagtaataatcgtatcagcgacattgaggaggggacttttgaaggagctttaggggtc
aacgagctgattctgacctccaacagactggagaacatacaccaccgcatgctgaaggga
ctcggtggcctccgcacacttatgctgagaagcaacaggatcagctgtgtgagtaacagc
agcttcgtggggttgagttctgtcagactcctttctctctacgacaaccagatcacctcc
atgaaccccggcgccttcgacacactgcactctctctccacactgaaccttttggccaat
cccttcaactgtaattgccacctggcctggctcggcgactggctgagaaggaaacgcatc
gtgactgggaatcctcgctgccaaaacccttatttcctgaaggagattcccatccaggat
gtggctgttcaggactttgcctgtgaagatggaaacaacgagaacagctgctctcctgtt
ctgaggtgtccagccgagtgttcctgtctggacactgtggtgcgctgcagcaacaaaggt
ctcaccacgctgcccaaaggtctcccaaaagagaccactgaactatatttggacggaaac
cacttcactcaggttccagtggagctctccaattacaaacacttaacgctcattgatttg
agtaacaaccagatcagcacgttgtccaaccacagcctcagtaacatgtccgaactgctt
acactaatcctgagctacaaccgtctgcggtgcataccagtgagggcgttcgatgggctc
aagtctttgcgtttgctatctcttcatggtaacgacatatccctgattccagaaggcgcc
tttaaagacctgtcttcactttctcatctggctctgggtgccaaccctttgtactgtgac
tgccacttgcagtggctgtccgactgggtcaagagcggctataaggagcccggcatcgcc
cgctgtgctgggcccggtgacatgacagacaaactgctcctcaccacaccttccaagaag
ttcacctgcacaggcccagtggatttgagtatccaggccaagtgtgacccctgtctgtcc
agcccctgtaaaaatgacggcacatgctccggtgatcctgtgcactactaccgctgcact
tgcccctatggatttaagggacaaaactgtgaggagcctattcatgcctgcatcagtaat
ccctgccagaacagtggaacttgtcatctgaaggaaggagatggaagccacttttggtgt
gtgtgtccggagggcttcgaaggcgacacgtgcgagatcaacattgacgactgtgaggat
aacgactgtgagaacaactccacctgcgtggacggaatcaacaactacacctgcatgtgc
tcaccagaatacacaggggagttgtgtgaggagaaactgaacttctgcaccccagagctt
aacccgtgtcagcacgactcaaagtgcattttgacccctcggggatacaagtgtgagtgc
actccagggtatgtaggtgagcagtgtgagctggactatgacgactgtgaagagaacaag
tgtcagaacggaggtcattgcattgacgccgtgaacggatacacctgcatctgtccagaa
ggatacagtgggctgttctgcgagttcactcccccaatggtcctccctcgaaccagtccc
tgtgacaaccatgactgcttaaatggagctcagtgcgttgttgtgggaacagacccacgc
tgccagtgtctccatggatacgagggcgagcattgtgaaacgctcgtgagtgtgaacttt
gtcaaccgggagtcctacctgcagcttccctccaatctcctctcaccacaaaccaacatc
agcttacagattgctactgatgaggacagcggcgtcttgttgtacaagggtgacaatgat
cacatagcaatggagctgtacagggggcgcctcagggtcagctacgacactggatcctac
cctccttctgcgatatacagcgtggagacggtgaatgatggtagtttccattctgtggag
ttagtagcagctgaccagacgttgtcactgtccattgatggcggaccacccaaatccatt
agctccatcagcaaacagtccacgctcaacctagattcccctctatacctgggaggaatg
ccagagcaggcatcagtttctggtggcctttctgcactgcagctcagctccggaggccgt
aacggcaccagcttccacggatgcctccgaaacctctacatcaacggaaagctccagaac
ttgggagccgggcatgaccaaagctctccaggtccagggactttgcagagctacagacag
tggctgggaaacggggtggaaccaggctgccagccgtgccggagaggtgcctgcgtccaa
ggcgactgccacccaacgggtcaccaaggtttcacctgtacctgccatcctgggtggaca
ggggctctgtgtgaccagcaagttagcaatccctgtgatggaaacaagtgtattcatggt
acctgccttccaatcaactcctactcctactcctgcgtttgccagcctggttttgctggt
gttctctgtgatgtacaggacctggatacagctaacccctgcagcctgtctcgctgcaaa
cacggcaaatgtcgagtgtcaggcctgggtaaagcatactgcgagtgtaacagcggatac
acaggggaggcatgtgacagagaggtggcctgccgaggggaacgggtcagagatgtctac
cagagacagcaaggctacgcggcgtgccaaacccaggagaaggtctcccgtctagagtgt
cgaggcagctgcccggggggagcagagggacagggcacctgctgcacccccctccgtagc
aaacgcaggaaatacaccttccagtgcactgatggatcttcttttgtccaagaagtggaa
aaggttgtcaagtgcggctgtacaaagtgttcttcgtaa
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integrated database retrieval system
