Gambusia affinis (western mosquitofish): 122830215
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Entry
122830215 CDS
T07758
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122830215
Enzymes [BR:
gaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122830215
Spliceosome [BR:
gaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122830215
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122830215
NCBI-ProteinID:
XP_043971328
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All DBs
Position
LG04:complement(12664304..12672203)
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDDEPQGLPESGTPASKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
IRELAFQISKEYERFSKYMPNVKVSVFFGGLAIKKDEDVLKKNCPHIVVGTPGRTLALIR
NKTLSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVNRCV
ALSQLLVEQNFPAIAIHRGMGQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNEVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatgacgttgataatgaacttctggactatgaggaggacgatgagccccag
ggactcccagaaagcggcacccctgccagcaagaaggaggtgaaaggttcctatgtatcc
attcacagctcgggcttcagagactttctccttaaaccagagctgctccgcgccattgtt
gactgcggttttgagcatccttcagaagttcaacatgagtgcattcctcaagctatcctt
ggtatggacattctctgccaggcaaagtctggtatgggaaagacggctgtgtttgtgttg
gccacattgcagcagattgaacctgtggatggccaggtgtctgttcttgtgatgtgccac
attcgggaattggccttccagattagcaaagagtacgagcgcttctccaagtacatgccc
aacgtcaaggtgtctgtgttctttggcggcctggccatcaagaaggacgaggacgtcctg
aagaagaactgccctcacatcgttgtaggaactccaggtcgtacgctggccctcattcgt
aacaagactttgagtgtgaagaacatcaaacactttgtgctggacgagtgcgataagatg
ctggagcagctggacatgaggcgtgatgtgcaggagatcttcagactgacacctcatgag
aagcaagttatgatgttcagtgcgacgctaagcaaggagatccgccccgtctgccgcaag
ttcatgcaggatcccatggaagtatttgtggacgatgagactaaactgacactgcatggc
ttacagcagtactactgcaagctgaaggacagcgagaagaacaggaagctgtttgacctc
ctcgatgtgcttgagttcaaccaggtggtgatctttgtgaagtctgtgaatcgttgcgtt
gccctgtctcagctgctggtggagcagaacttccctgccatagcaatccaccgggggatg
ggacaggaggagaggttatcccggtaccagcagtttaaagacttccagaggcggattctg
gtcgccactaacctgtttggccgaggaatggacatcgagagagtcaacatagtcttcaac
tacgacatgcccgaggattctgacacatacctccacagagtggcccgtgcaggcaggttt
ggaaccaaaggcctggccatcacctttgtttcagatgagactgacgctaagaccctgaat
gaagtccaggatcgcttcgaggtcaacgtagctgagctaccagacgagatcgacatctcc
tcctacattgaacagtccagatga
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