Gambusia affinis (western mosquitofish): 122830307
Help
Entry
122830307 CDS
T07758
Symbol
si:ch211-79m20.1
Name
(RefSeq) bromodomain-containing protein DDB_G0280777 isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04010
MAPK signaling pathway
gaf04020
Calcium signaling pathway
gaf04510
Focal adhesion
gaf04540
Gap junction
gaf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122830307 (si:ch211-79m20.1)
04020 Calcium signaling pathway
122830307 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122830307 (si:ch211-79m20.1)
04540 Gap junction
122830307 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122830307 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gaf04052
]
122830307 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122830307 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
gaf04052
]
Cytokines
Growth factors (RTK binding)
122830307 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
122830307 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
Motif
Other DBs
NCBI-GeneID:
122830307
NCBI-ProteinID:
XP_043971487
LinkDB
All DBs
Position
LG04:complement(26430351..26451276)
Genome browser
AA seq
561 aa
AA seq
DB search
MKSWVLLALLLAALLSARLRLGNAEGDSLPQSLIDLVWDSPISSVEDLKLLLLLQQESST
IEDKEDEHDSLLSPVHGRYIRSLEAQQAQKADCKVRTEVMEITRSMVDRSNGNFLVWPRC
VEVQRCSGCCNSRHQQCAPVVNATRNLEVTKIVYRNQKRFIETAIIPVVDHVSCRLQAIP
PSTSSSSSSTVFASQPNPLPAPPQRYPTSSLPLFPSHSSQPLPPKTPTSKADLHRHDDLK
HNQHHHLPHKQDPLARQWQQGSYTQLVRWTQPRAHQAPTYTQTRLTTAGFLGSVGTWPSE
ARAEHSVLESPQQVGHESGFDRSREETSGEARRPDHEQRQQELLKHQQRQEHHHHHHQHP
QHPHLSQQHNPRGDEKQEMRTQHLLHAPQSDSTSPPVSMTPAPTTRQNPTSFTTVIQKDS
VTSQTYGEVTRHKQVESKGDGPKDGTEREESGSAVSGDSGRAEAANQEKENDSKLSGGTD
YLTEEERRKKLLEMVQSEPEKDPHLHSHQRPKPTTFKSALSTVVPTSTAARQVPFRPASP
RRRKRKHRKRISKAAMRAMIM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcctgggtcctgctagcgctgctgctggctgcgctgttatcggcccgtctgcgg
ctcgggaacgctgagggcgattcactccctcagtcactgattgacctggtgtgggactct
cccatctcctcagtggaggacctgaagctgctgctgctgctgcagcaggagtccagcaca
atagaagataaagaagacgagcatgacagtcttctaagccccgtccacggtcgatacatt
agaagtcttgaagctcagcaagcccagaaggcggattgtaaagtcagaacagaggtgatg
gaaataacgagatccatggtggatcgtagcaacggcaacttcctggtgtggcctcggtgt
gtggaggtgcagcgatgttcaggctgctgcaactccagacaccagcagtgtgcccccgtc
gttaacgccacccgaaacctggaggttacaaagattgtgtacaggaaccagaaacgtttc
attgaaaccgccatcatcccagtagtagatcacgtgagctgtcggctgcaggcgattcct
ccctccacatcgtcgtcttcttcatcgactgtcttcgcctctcaaccaaaccctcttcca
gctcccccgcaaagataccctacatcctccctgcctcttttcccatcccacagctcccag
ccgcttcccccaaagactcccacctccaaggccgacctccaccgccacgacgacctcaag
cacaaccagcaccaccaccttccgcacaagcaagatcctttggcaaggcagtggcagcag
ggcagctacactcagctggtgcgctggacgcagccccgagcgcatcaggcccccacatac
acgcagacccgactcacgacggccgggtttctcggctcggtcgggacctggccgtctgag
gcgagggcagagcacagcgttctggaaagtccgcagcaagtcggacacgagagcggcttc
gacaggagccgcgaggagaccagcggggaggcgcgccgtcccgaccacgaacaacgacaa
caagagctgttaaagcaccagcagaggcaggagcatcatcatcatcatcatcaacatcct
caacatcctcacctctcgcaacaacacaaccccagaggagatgagaaacaggagatgagg
acgcaacatctgcttcacgctccccagtcggacagcacttccccgcccgtcagcatgacc
ccggcgcccacgaccagacaaaatcccacttctttcacaactgtaattcaaaaagactca
gtgacgagccaaacgtatggagaggtcactcgtcacaaacaggtggagagcaaaggagac
ggtccgaaagacgggaccgagagggaagaaagcgggtccgcagttagcggtgactcgggt
cgggcagaggcagccaatcaagagaaggaaaatgactcaaaattaagtggtgggacagac
tatttaacagaggaggagagacgaaagaagctactggagatggtgcagagtgagccggaa
aaagaccctcatctgcattctcaccaaagaccaaaaccaacgacatttaaatcagcgttg
tccactgtggtacccacgtcgacggcagctcgtcaggtaccgttccgacccgcttctcct
cgccgcagaaaaagaaaacaccgcaaacgcatcagcaaagctgcgatgagggctatgatc
atgtag
DBGET
integrated database retrieval system
