Gambusia affinis (western mosquitofish): 122830522
Help
Entry
122830522 CDS
T07758
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04020
Calcium signaling pathway
gaf04080
Neuroactive ligand-receptor interaction
gaf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122830522
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122830522
04082 Neuroactive ligand signaling
122830522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122830522
Ion channels [BR:
gaf04040
]
Ligand-gated channels
Glutamate (ionotropic)
122830522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
122830522
NCBI-ProteinID:
XP_043971815
LinkDB
All DBs
Position
LG05:complement(19478222..19588116)
Genome browser
AA seq
1958 aa
AA seq
DB search
MVAIPTLSLLLVLAEWAGLVDASPHLLLRPSPRERDAGAVMNFNIAVIHAGATVQAEAAV
AGPGGRVLYPGFGRVYGSLGESVVTQWGSANVIWLQVNDSSPKTVLSQLCELLAARPLQG
LVYEEERPPRTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLGRMPQESGSIFLQFSSSTAL
QLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSVVEGLTDGSFIGWEKKSVVILNVTDDPG
GARTRRLLKENEAQVRLLYCSQEEAELVFRAAWAAGQAGASHMWFAVGPTLSGLGMESLP
RALFAVRPQGWRDEPRRRIARGVSVLTHGAVAMRKEYGSTGGPNFVTTCMTDANQTQRLR
SRMRYFSNITLGGRDYSFNSDGYLANPFLDVISWTPGRGWEDVGWWENGVLRLRYPAWSR
YGPFLKPPDDAQHLRVVTLEERPFVIVELADPSSGTCIRDSVPCRRPLNASAIHEGVAPL
KQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMIGEVVYKRADMAIGSL
TINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVT
VFIFEFFSPVGYNRSLETGKKAGGSTFTIGKSVWLLWAIVFNNSVPVENPRGTTSKIMVL
IWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPEEQYPPLKFGTVPNGSTEK
NIRSNYPDMHQYMGKYNQRGVEDAILNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGS
GKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSKL
DIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCMASSSGKLDFLLAISRGMYSCCSF
EDETAPGGSKSLPSHHHTAMVTVPSQPHVVSTTVTNPAIAMAQQQQQPQQQQPPPVYKTP
LPGSPPTVVHSGSALGSSNPPIAGAPLPCSTFLPRPDRRLAVVDRWRLPKTATATNPMAV
RGGITDMGPFAQKVPQNWATAAGGGGGLDGYKRYYGPIDPEGLGSCMDQQAGSQTPKTMP
RGHPQPPPASVAFYSEKSMDHGVGKKVVGGGSGGQGKGPVKPLGTPRLPPKSQAPLPPTP
PLPHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGTRDGMREGGGRRTRPLSPP
LSLPIPVPLSPSYTPPSPSASLHYTSSSSTSTTSSTSTSSSASSSRSTSPTYSYSSSRST
RDRTGGIDGEDDDDDEDLTEESSLLLGRGRERERSIIRPRSLSHGRLPPPIPPRKPRTSW
GDRERERERERGGSQLSQLQEWWASWSERERRGTGGETERLKREKKRRKEKEKEKKKKKK
NKKRKKREERERERERERKRRKVKKKKKKALKTKKRKKSTGGKRSEPEEGDGEQERDGEA
ERERDEGIQDFSSFSAQYGSTFGEKGRDSWEGDRERGRGEDGNDRDEEDSGRSRERCPKT
SHSHRRRTPNKRYSNSNKFPASVKFWMNGRGDNSNTTPVSLHPLLPSSKRRKSGGIDRED
NGRVGERRPLLMHYEKEKAQTREGLSFHEWDSDDDDDNDDDDDDDDEEERDRVRERGENR
GRRVGRGAVSESERDRGRVEDSYSDEGSSGEFGRFERYWEESAGGTGTGIGGIGGGGWFF
GTYPSREKGGSINSRDDSLLGTRAEGWIGADFWGSGPGIGWASGGGSGGLGSQWPPPPTA
FPPPRRYWSMDKIPVKGEKKWKSGGGKRKGRSRERLDEGGRSTLCSCSLFPQPHPYPHPH
GRSQTSNSKRRASALSRSQEELLPHCHSFSGGSRPKPLPPKPDSSQAKSGSQSNLSLNTQ
PTDHQPQPSPSPPQQPSLSPTSLPMPIVPPASSASVSPPAGVGMAGSAQASASAKLQYQR
LRSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccatacctactctctctctcctattggtcctggcagagtgggcaggtcttgtg
gacgcatctccccacctcctgctccggccgagcccgcgggagcgtgatgcaggggccgtg
atgaacttcaacattgccgtgatccacgccggtgccacggtgcaggcggaggcagcggtg
gcggggccggggggaagggtgctctaccccggctttggacgggtatacggctccctgggg
gagagcgtggtcacccagtggggctctgctaacgtcatctggcttcaggtgaatgacagc
agccctaagacggtgctgtcccagctgtgtgagttgttagcggcgaggcccctgcagggt
ctggtttacgaagaggagaggccccctcggacggcttggggtcccttggcccccatgctg
gagtttgtctctgcacaaacaggactgcctatagtggctgtaggcgggggagcagggctg
gggaggatgccacaggaatcaggttccatctttctccagttcagctcctccactgcgctc
cagttagaggtcatcttcgaggtgctggaggagtacgactggaccgccttttctgtggtg
tccacgcgtcaccatggctaccaggacttcctttccgtggtggagggactgacggacggc
tcgttcatcggatgggagaagaagagtgttgttatcctgaacgtgaccgacgatcctggg
ggtgcacgcacgcgcaggctgctgaaggagaacgaggcgcaggtccgcctgctgtattgc
tctcaggaggaggctgagctggtcttccgtgctgcctgggccgctggtcaggccggggcc
tcgcacatgtggttcgcagtgggccccactctctcgggtctgggcatggagagcttgcct
cgggcgttattcgccgttcggcctcagggctggagggacgagcctcgccgaaggatcgct
cggggtgtatcggtgctcactcacggagcggtggcaatgcgcaaggaatatggaagcacg
ggcgggccaaactttgtcaccacatgcatgacagatgccaatcagacccagaggctgcga
agcaggatgaggtatttcagcaacataacgcttggtggtcgagactattccttcaatagc
gacggttacctggccaaccctttcttggacgtcatctcttggacacctggaagaggctgg
gaagatgtaggctggtgggagaacggcgtgctgagacttcgatacccagcttggtcccgc
tacgggcccttcctgaagccgcctgacgatgcccagcacctgcgggttgtaacactggag
gaaaggccatttgtcattgtagagcttgcagacccttcttcaggaacctgcatccgggac
tctgttccctgcagacgtcctctcaatgccagtgcaatccatgagggtgtggctcctctg
aagcagtgctgcaagggtttctgcattgacatcctcaagcgactcgcaaagattgtcggc
ttcacctacgacctctacttggtgaccaacgggaagcatgggaagaaaattgatggcgtt
tggaacggcatgattggagaggtggtgtacaagcgggcggacatggccatcggctcgctg
actatcaatgaggagaggtccgaggtcgtggatttttctgttccattcgtggagacaggg
atcagtgtcatggtctcccgtagcaatggcactgtatcaccatcagcttttttagagcct
tatagtccagcagtgtgggtgatgatgttcgtcatgtgcctcaccgttgtagctgtgacc
gtctttatttttgaattcttcagccctgtgggctacaaccgcagtctggaaacaggaaag
aaggcaggagggtccactttcaccatcggaaaatctgtctggcttttatgggccattgtc
ttcaacaattctgtgccggtggagaacccaagaggaaccacaagcaaaatcatggtgctg
atctgggccttctttgctgtcatctttctggcctcttacactgctaacctggctgccttc
atgatccaggaagagtacattgacacagtttcaggcctctcggacaagaagtttcagcat
ccagaggagcagtacccacctctcaagtttggcacggtgcccaatgggagcacagaaaaa
aacattcgctccaactatccggacatgcaccagtacatgggcaaatacaaccagagagga
gtggaggacgccatcctgaacctaaagactgggaagctggatgcttttatttatgatgct
gcagtgttaaactatatggccaggaaggacgaaggttgtaaggtgatgaccataggctcg
gggaaggtttttgccaccacaggctacggtatcgccctgcacaaaaactcacgttggaaa
cgtcctcttgacctggccctgctgcagctagtgggagatgatgagattgaaatgctggag
cgcctctggctgtcaggtatctgccataatgacaaaattgaggtgatgagcagtaaactg
gacattgacaacatggctggggtcttctacatgcttctggtggctatgggcctcagtctg
ctggtgtttgcatgggaacatttagtctactggaaactgcgccactgtatggcctctagt
tctgggaagttggactttctcttggcaattagcagaggcatgtacagctgctgcagtttt
gaggatgaaacagcaccaggtggatctaaatctttgccttcacaccaccacacagcaatg
gtgactgttccatcacagccacatgtagtttcaactactgtgaccaacccagcaattgca
atggcgcaacagcagcaacaaccacaacagcagcaaccaccacctgtctacaaaacacct
ctaccaggctctcctcccactgtggtacattctgggtcagctctgggttcttctaacccc
cccattgctggtgcccccctcccttgctccactttcctgcctagaccagatcgaaggttg
gcagtagtggatcgctggaggttgcctaaaactgctacagccaccaaccccatggctgta
agagggggcatcactgacatggggccgtttgctcagaaagttccacaaaactgggctaca
gctgctggagggggtgggggactcgatggctataagagatattatggtcccattgaccct
gagggactgggatcctgcatggatcagcaagcagggtcccagacccccaagactatgcca
aggggccacccccaaccccctcctgcgagtgtggccttctattcagagaagagcatggac
cacggggtggggaagaaggtggtgggaggtggcagtggaggtcaggggaaagggcctgtt
aaacctctgggcacccccaggctgcctcctaagagtcaggcccctctacctcctacacct
ccactgccacatccctctccccctcttccttcatccttctggagaaagcggaggcccaag
aagcccaaagagcctgggggaccactttatgagaacattttacctctggggcgaagggga
ggaacaagagatggaatgagggaaggaggaggaaggaggacccgcccgctttctcctcca
ctttcacttcctataccagttccactgagcccctcctatactcctccttctccttctgca
tctttgcactatacgtcctcatcctccacgtcaaccacctcatcaacgtcaacgtcttca
tctgcctcatcttcccgctccacctctcccacctactcttacagctcctccaggagcaca
cgagacaggactggaggaattgatggagaggacgacgatgatgatgaagatctgacagaa
gagtcaagtctactccttgggaggggaagagagagggagcgctctatcattcggccacgt
tcccttagccacgggcgcttgccaccaccaattccccccaggaaaccacgcacatcttgg
ggtgacagagaaagagaacgagaaagggaaagaggcgggagccaactgtctcagcttcaa
gaatggtgggcaagctggagtgaaagggagaggagaggaacaggtggagaaactgaaagg
ctgaaaagggaaaagaagaggaggaaagaaaaggagaaagaaaagaagaaaaagaaaaag
aacaaaaagagaaaaaagagagaggagagagaaagagagcgggagagagaaagaaagcga
aggaaggtgaaaaagaagaagaagaaggcattaaaaacaaagaaaagaaaaaagtctact
ggggggaaacgatctgagccggaagaaggagatggagaacaagaaagggacggggaagct
gagagagaaagagatgaaggcatacaagacttctcttctttttctgcccaatatgggagc
acatttggagagaaggggagagattcatgggaaggagacagagaaagaggtaggggagaa
gatggcaatgacagggacgaggaggacagtggaagaagtagggaaaggtgtcccaaaacc
tcacactctcatagacgtcgaacccccaataagcgctactctaactctaataagtttcct
gcgtctgttaaattttggatgaatggaagaggagataactccaataccactccagtatcc
ctccacccacttcttccatcatccaagcggcgaaaaagcggagggattgacagagaagat
aatggtagagttggtgaaagacgtcctttgttaatgcattatgaaaaagagaaagcacag
acaagagaagggctgtctttccatgaatgggactcagatgatgatgatgacaatgatgat
gatgatgacgatgatgatgaggaagagagagacagagtgagggagcggggagagaacagg
ggaaggagggtaggcagaggggctgtctctgaatctgaaagggacagaggaagggtggag
gacagctactcagatgagggttcttcaggagaatttggtcgttttgaaagatactgggaa
gaaagtgcaggaggcactggcactgggattggaggcataggtggaggaggctggttcttt
ggtacctatccctccagagagaaagggggaagtattaatagtcgagatgattcgttactg
ggaacacgggcagagggatggattggtgctgatttctggggatctgggccaggaataggt
tgggcatctggtggagggagtggagggctgggctcacagtggccaccacccccaacagcc
ttccctccacctagacgatactggtcaatggacaaaattcctgtgaagggagaaaaaaag
tggaagagtggtggcggaaagagaaaaggacgaagcagggaaagactggatgagggagga
cgatcaactctgtgttcctgcagccttttcccacagccccatccttatccacatccccat
ggccgttcacaaacttctaattccaagagaagagcatcagcactttcccgtagccaagaa
gagcttcttccccactgccacagcttcagcgggggttctcgtcccaaacctttgcctccc
aaaccagattccagtcaagccaaatcaggcagccaatctaacctcagcctcaacacacag
ccgacagaccatcagccacagccctcaccatcaccaccgcagcagccatccttgtcaccc
acctcgctccccatgcccatcgtacctccagcctcctcagcctctgtctcgccaccagca
ggggtagggatggcaggttcggctcaggcttcagccagtgccaaactccaatatcagaga
ctgcgctctgtgcctcagccacggaggttctactctccccacctaccactcaaagccaag
agcctgtgctcacgtcgagggtcagcccacttttccagcctggagagtgaggtatga
DBGET
integrated database retrieval system