Gambusia affinis (western mosquitofish): 122830589
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Entry
122830589 CDS
T07758
Symbol
bcan
Name
(RefSeq) brevican core protein isoform X1
KO
K06795
brevican
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gaf00535
]
122830589 (bcan)
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122830589 (bcan)
04091 Lectins [BR:
gaf04091
]
122830589 (bcan)
Proteoglycans [BR:
gaf00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
122830589 (bcan)
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
122830589 (bcan)
Lectins [BR:
gaf04091
]
C-Type lectins
Lecticans
122830589 (bcan)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
Ig_3
EGF_DL_JAG
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
122830589
NCBI-ProteinID:
XP_043971963
LinkDB
All DBs
Position
LG05:20516912..20538141
Genome browser
AA seq
1211 aa
AA seq
DB search
MKLDMSPHLLLFSLYLLVLPSSPIPHQEPDDFKLLQVTIPTTVPVLTMLGGSLTLPCLVS
LTHPPPSPSTNGRHAVLSVPRVKWSVLRHGQETEILVARGDRVRVNEVYKDRASLLNYAF
SPADLTLRLESLRQNDTGFYRCEVQQGLEDADDVVLVKVKGVVFHYRDASSRYAFTFERA
TVACEEIGAEIASPEQLLAAYHSGYEQCDAGWLSDQSVRYPIQMPREGCFGDMDGMPGVR
NYGLLDHDELYDVYCYVENIQGEVFHGSAPQRFTFWEAKAYCVSHGAELATTAQLYAAWN
DGLNHCSPGWLADGSVRYPIVTPRERCGGGEPGVKTIYQYSNQTGFPDILSQHDVYCFKS
DSGPYTETPQDALATEPEDIGQDIVFQATQEDASLSEVAPEWREEMQHPQTAKPVNQHPE
VPSQTSTPLSDHKETFSTIESWELIMKESYSDSYQPPKESPNKDHQESLVLPTSSPKFDA
VTNENTTPVTYITATETVIPTEGHTPETVSLDWLAVNVTSEGDVEEIHHEENDLPVSQED
YTTAVSSGPFSVTESAVSVAPEENATHTAVQISAEKTSPQNEEVDVPSTSMFPAFAESSA
EEISGEGTSDAQEEEKKDSVTPNFMEIDILSTSVMVPTSDSGYTLTPEHSDVPTESALQL
NIHDEDINSSSNTTEADDVTEQRGHIHPAELTNVEVPLVTDETFLVSPDSVTQVPLSVKV
EVRSDGRTFYPESPTPSEVEPLEENQDPLEENQEVFLNTVPNPTEDDLNEGWDESSGENP
HINPELSATNPSLSADHTIDGSDAPPLTEIKITLIPDLSLTPRWEPVPLTPTAQESRSDR
EYSAEPPVKDKSNEISKEQEFARTRSRTHAAQGSEGSAGEPTTDEAPVHICTWHPEEEDS
SPAVPTADVDVTIAAPHSEREVFKVNEREHTAMGAALPAAKVPAATQGDSCLENPCLNGG
TCVDGNPLRCICLPGYGGALCQKDVEECEPGWEKFQGFCYRHFSKRQSWEAAEQHCRLCG
GHLLSVMTPEEQHHINDKYREYQWIGLNDRTIEGDFRWSDGNPLLYENWYKHQPDSYFLS
GEDCVVMAWHDGGHWSDVPCNYHLSYTCKKGVSSCGEPPRVHHALVFGKKRSRYETNSRI
RYYCEEGFIQKLNPVIRCLPGGHWEAPQITCVRTRTVEGDSSPSQLDQHEDVVVAAAEKA
APLYWDIKWNF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggacatgtccccacaccttctgctgtttagcctctacctccttgttctaccg
tcgtccccgattccccaccaagagccagatgatttcaagctcctccaggtaaccatccct
accactgtgcctgtgcttaccatgctggggggttcactgactttgccctgcctggtgtcg
ctcacccacccaccgccgtccccttccactaatgggcgccacgctgttttgtctgtgcca
cgagtcaaatggagcgtcctgaggcatggtcaagagacggagatcttggtggctcgtggc
gacagggtgagagtcaacgaggtctacaaggacagagcctcgctgctgaactacgccttc
tcccctgcagacctcaccctgcggctggagagcctgaggcagaacgacactggcttctat
cgctgcgaggtgcagcaggggctggaggacgctgatgatgtggtgctggtcaaggtcaag
ggtgtggtgtttcattatcgcgatgcatccagtcggtacgcctttacctttgagcgtgcc
acagtggcctgtgaggagatcggggctgaaattgcctccccagagcagctcctcgcagcc
tatcacagtggatacgagcagtgtgatgcaggatggctgtcagaccaatctgtcagatat
cccattcagatgccaagggagggatgctttggagacatggatggcatgccaggagttcgg
aactatggactgttggaccatgatgagctctatgacgtctactgctatgtggagaatatt
caaggtgaggtgttccatggctctgccccccaacgcttcaccttctgggaggctaaggcc
tactgtgtgagccacggtgcggagctggccaccacggctcagctttatgcagcctggaac
gatggactgaaccactgcagcccgggatggctggcggatgggagtgtgcggtaccccatt
gtcactcctagagagcgctgtggaggaggggaacctggagtgaaaaccatctatcagtac
agcaatcagacaggcttccctgatattctctctcagcacgatgtctattgttttaaaagt
gacagtggcccttatactgaaactcctcaagatgctcttgccactgaaccagaggacatt
ggccaagacattgttttccaggccactcaggaggatgccagcctgagtgaagttgcacca
gaatggagggaggagatgcaacatccccaaacggcaaagccagtaaaccagcaccctgaa
gttccttcacagacttcgactcccctgtctgatcataaagagacattctctactattgag
agctgggagctgataatgaaggaaagttactctgattcttatcagccacctaaagaaagc
ccaaacaaagatcaccaagagtctcttgtattaccgacatcttctccaaagtttgatgcc
gtaaccaatgagaacacaacacctgtaacttatatcacagcaacagaaactgtgataccc
acagagggtcacaccccggagactgtgagcttggattggttggctgttaatgtcacgtct
gaaggtgatgtggaggaaattcatcatgaggagaatgatcttccagtttcacaagaggac
tacacaacagctgtctcttctgggcctttctctgtaactgaatctgctgtttcagtagca
ccagaggaaaacgccactcatactgctgtacaaatttcagctgaaaaaacttcaccccaa
aatgaagaagttgatgttccttccacctccatgttcccagcttttgctgagagttcggct
gaagagatttccggagaggggactagtgatgctcaggaagaggaaaaaaaggactctgtg
acccctaattttatggaaattgacattttgtccacttctgtcatggtacccacttctgac
tcaggttataccctcacaccggagcactctgatgtaccaacagaatcagctctccaattg
aacattcatgatgaggatataaacagctcttcaaacactacagaagctgatgatgtaaca
gagcagagaggacacatccatccagcagagttaacaaacgtagaagttcctctagtcaca
gatgagacattcctggtatctccggactctgtaacacaagttcctctttctgtgaaggtg
gaagtcagatccgatggtagaacattttatccagaaagtcccactccttctgaggttgaa
ccattggaggagaatcaagacccgttagaagaaaaccaagaagtcttcctcaacactgtc
ccaaatcccacagaggatgatttaaatgaggggtgggatgaatcctcaggagaaaatcca
catataaatcctgaactcagtgcgacaaacccgagtctctcagctgaccacaccatcgat
ggcagtgatgctcctcctctgaccgagataaaaattacgctgatccctgatctgagcctc
acacccaggtgggagccggtacctttgaccccaacagcacaggagtctcgctctgatcgg
gaatacagtgcagagcctcctgtcaaagacaaatctaatgagatctctaaagagcaagaa
tttgctagaacacggagcagaacccatgcagctcaaggatcagagggaagtgcaggagag
cccaccacagatgaggccccagtccacatctgcacatggcatcctgaagaagaggacagc
tcccctgcagtgcccactgctgatgtggatgtgactattgctgctccccattcagaacga
gaggtttttaaagtgaatgaaagggagcacacagccatgggggctgctcttcctgcagcc
aaagttcctgctgcaacacaaggagactcctgcctggagaatccttgtctgaatggggga
acttgtgttgatggtaatccactaaggtgcatttgcttgcctggttatggaggagccttg
tgtcaaaaagatgtggaggagtgtgagccaggttgggagaagtttcaaggcttttgttat
cgtcacttcagcaaacggcaaagctgggaagcagcagagcagcactgtcggttgtgtgga
ggacatctgctttctgtcatgactcctgaggagcaacatcacatcaacgataaatacaga
gaatatcagtggattggactaaatgacagaaccattgagggagacttccgctggtctgat
ggaaaccctctgctctatgagaactggtacaaacaccagccagacagctacttcctgtct
ggggaggactgcgtggtgatggcttggcacgatggcggtcactggagcgatgtgccatgt
aactaccacctgtcctacacctgcaagaagggtgtctcgtcctgtggagagccccctcgg
gtccaccatgctctggtgtttgggaaaaagcggtcgcgttacgagaccaacagcaggatt
cggtactactgtgaagagggttttatacagaagctcaaccctgttattagatgtctgcct
ggaggccactgggaagcgcctcagattacctgtgtgcgaactcgtacagtggagggggat
tcctcaccttcccagcttgaccagcatgaggacgtcgtggttgcagctgcagagaaagca
gcaccactttactgggatataaagtggaatttttaa
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