Gambusia affinis (western mosquitofish): 122830645
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Entry
122830645 CDS
T07758
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03013
Nucleocytoplasmic transport
gaf03015
mRNA surveillance pathway
gaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122830645 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
122830645 (rbm8a)
03015 mRNA surveillance pathway
122830645 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122830645 (rbm8a)
03041 Spliceosome [BR:
gaf03041
]
122830645 (rbm8a)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122830645 (rbm8a)
Spliceosome [BR:
gaf03041
]
Complex C
Other components
EJC/TREX
122830645 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122830645
NCBI-ProteinID:
XP_043972097
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Position
LG05:29644257..29647467
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AA seq
175 aa
AA seq
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MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGLEEGSRSRAKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQTISVDWAFVRGPPKNKRRGGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgttagatcttcatgaggcgggaggcgaagactttcctatggatgaggat
ggtgatgagagcatccacaagctgaaagagaaggccaagaagagaaaaggacgaggcttc
ggcttggaggagggatccaggtccagagctaaagaggactatgatactgtggagcaagat
ggggatgaaccaggtcctcagagatcggtggagggatggatcctgtttgtgactggtgtg
catgaggaggcaacagaggaggacatccatgacaagttttcagagtttggagaaattaag
aacctgcatcttaaccttgatcgaagaacaggttacctgaagggctatgcactagtggag
tatgagacatacaaagaagcacaggcagccatggagggcctcaatggtcaggacatgatg
ggccagactatcagcgtcgactgggcgtttgtcagaggacccccgaagaacaagaggagg
ggaggtggacggagacgcagcagaagtccagaccggagacgacgttga
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