KEGG   Gambusia affinis (western mosquitofish): 122830731
Entry
122830731         CDS       T07758                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122830731 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gaf03400]
    122830731 (xrcc1)
DNA repair and recombination proteins [BR:gaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     122830731 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 122830731
NCBI-ProteinID: XP_043972283
LinkDB
Position
LG05:27238257..27258844
AA seq 627 aa
MPEIQLKHVISCSTEDSTHKADNLLSSDTYRKWKAAKPGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVKDQDYEVLLVTSSFMSPTESRNGTNMNRVRFFGPNQLQKSTA
QEKWDRVKIVCTQPYSKNIAYGLAFVKFHSPPDKIDPPTSSPKLTKLGQFRVKDESPSSV
PSLQPGSLFFNRDNATKPSTSLKVSPQSDKLSYAAAALQAGSSSQSPGQASTSISASPQP
PAKRKFEFSKERQSPSGPPPTKRVSSGGSPETKAVTPKYKPSPVSTPSPSTAKASSAKKS
AEKKKESQSKPEPKPKPKTKSDSEQQVPLNRILEGVVFVLSGFQNPFRGELREKALEMGA
KYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISHKRYLMDGAE
SSSESETDGDDQSEEEIETKIPQKQVKQVTPKKTPEKKDEDDEYGASTDVDESGKEDEGD
DESGVDTEDELQRVESKQKKAAAKESSVKEEDPYGGSTDENTDAEAEEDHPIPELPDFLH
GKHFFLYGKFPNNERRLLLRYIVAFNGVIEEYMSDKVQFVVTSGGWHESFEDALMENCNL
NFVKPAWIYAINERQKMLPYQPYTVVP
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgccagaaattcaactcaagcatgtaatttcttgctccaccgaggacagcactcataaa
gcagacaatctgctgagctcagacacatacagaaagtggaaagcagcaaaacccggtgag
aagcagacgtccgtcatcctccagtttgaaaaagaggagcaggtccacagtattgatatt
gggaatgaaggatcagctttcatcgaggtgttggttgggaattcttcagctgtcaaagac
caggactatgaggtacttcttgtcacatcttccttcatgtcccccaccgagagccgcaat
ggcaccaacatgaaccgggttcgtttcttcggacccaaccagttgcagaagagcaccgct
caagagaagtgggacagggtgaaaattgtgtgcacccagccgtacagcaagaacattgca
tatggccttgcttttgtcaagttccactcaccacctgataaaatcgatcctccgacctcc
tcccctaaactgacaaagctgggacagttcagggtgaaagatgagtctccttcatctgtg
cccagccttcaacctggtagcctcttcttcaaccgagacaatgcaacaaagccaagcact
tcactcaaagtgtctccacagagtgacaagctgagctatgctgctgctgctctgcaggca
ggaagtagctctcaatcaccaggtcaagcttccacctccatctctgcctcaccacagcca
ccagcaaaaaggaagtttgagttcagcaaagaacgacagtctccctctggacctcctccg
acaaagagagtgagttctgggggctcgcctgagaccaaagctgtgacccctaaatacaaa
ccaagtcctgtcagcacgccaagcccaagcactgccaaagcatcatcagcaaagaaatct
gctgagaagaagaaggagagccaatccaaaccagaaccaaagcccaaacccaagacaaaa
tccgacagcgagcagcaggtcccattgaaccggatcttggagggtgttgtgtttgttctg
agcggcttccagaaccccttcagaggggagctgagagaaaaagcgcttgaaatgggagcc
aagtaccggcccgactggacacctgactccacacatcttatttgtgccttcgccaacacc
cccaagtacagccaggtgaaatcagcaggcggcatcattgtccggaaagaatgggtgatg
gactgccataagaggaaacagaagatttcacataaacgctacttgatggatggggcggag
tccagctccgagagcgaaacggatggcgacgaccagagtgaggaggaaatcgaaactaag
attccacagaagcaggtgaaacaagtcaccccgaaaaagacaccagaaaaaaaggatgag
gatgatgaatatggagcctcaactgacgtggatgaatcaggtaaagaagatgaaggtgac
gatgaatcgggagtagatacagaagacgagctgcagagggtggagagcaaacagaagaaa
gcagctgcaaaagaatcatcagtgaaagaagaggatccatatggggggtcgacagatgaa
aacacagatgctgaagcggaagaggatcatcccatccctgagctgccagattttcttcac
ggaaagcactttttcctttatggaaaatttccaaacaacgagaggcgactacttttacgg
tacatcgttgcctttaacggagtgatcgaggagtacatgtcagataaagtgcagtttgtc
gtgacaagcggcggatggcacgagtcctttgaggatgcgctgatggagaattgcaacctg
aactttgtgaagcctgcatggatttatgcgatcaatgaacgtcagaaaatgctgccctac
caaccatacactgttgtgccctga

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