Gambusia affinis (western mosquitofish): 122830863
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Entry
122830863 CDS
T07758
Name
(RefSeq) terminal nucleotidyltransferase 4A-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122830863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122830863
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122830863
Enzymes [BR:
gaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
122830863
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
122830863
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
122830863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
122830863
NCBI-ProteinID:
XP_043972532
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All DBs
Position
LG05:complement(10616783..10624873)
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AA seq
805 aa
AA seq
DB search
MDPRTVWIQPEQKGPANSLWMQIWETSQAFGANSGLDNQPHHQRNFAVQNANLGSYVERC
RHVVPTPGTVFGKLPRADSGGGERGSVRRKGSLSPSSSSLDSEADSSSPHGSSLQIDSMS
AADEAEQFLHYGERKVNENSLRQPFHAVQQHCRSMQQPGGHTPTGMKNHPGSKQHHYQSH
PPGRRRQLNRANTFHGFNPLLSYDINAHYVDSSYILWKTRRYSPGINGLHEEIMDFFSFM
SPRPEEEAMRRDVVNRIESVIKDLWPTARVEIFGSFSTGLYLPTSDIDLVVFGKWDHPPL
QDLEQALKKHNVAGNYPIKVLDKATVPIIKLTDHQTKVKVDISFNVETAVKAAQLIKSYL
KKYTVLPPLIFVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDTRRTNINLGI
LLIEFFELYGRDFNYMKTGIRVKNGGAYLSKEEMLKTMDHGNRPSMLCIEDPVQPGNDVG
RSSYGVLQVKQVFDFAYMVLSHGVSPLYAYPNKEYDSTLGRIVKVSQEVLSYREWIIKKW
GAKQCAKRQNDDVDTCEQELARMMLIEDQRNSPSPLSSDSLSPSPVFPPSPQHHSSSSSA
CSLSSSSSGSDIESDSPKSSNSSIHLHPLTLASIHSVIQVATDLGATHPASFLHTSHPAP
HVQMPLPENLTIPPSSCQFYHENPPSISVVHHHTTHAAQFPQQTKPPSPLLAHLNHSQIG
GPLHHPYAQRSYSQGSLEPHKFGSKHNQTGNIQCHNISQGNFSLQHRLVHQTHNVASCFR
NQHQYNRNTWRRRKKDVVPALNQSQ
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaggaccgtttggattcaaccggagcagaagggaccggccaattccctgtgg
atgcagatttgggagacctctcaggcattcggagcaaattccggcctcgacaaccagcct
caccaccagcgcaactttgcggtacaaaatgcaaacttgggctcttacgttgagcgctgc
aggcatgtagtgccgacacccgggactgtgtttggtaaactgccgcgggcagacagcggc
ggcggagagaggggaagtgtccggaggaagggctccttgtcaccgtcctcctcctctctg
gactcggaggccgacagctcctctccccacggctcctcgcttcagattgacagtatgagc
gcggcggacgaggccgagcagtttttgcactacggtgagcggaaggtgaacgagaacagc
ctcagacagccttttcacgctgttcagcaacactgtcgcagcatgcaacagcccggcggc
cacacccccacagggatgaagaaccatccagggagcaagcagcaccactatcaatcacat
ccacccggccgcaggaggcagctgaacagggccaacactttccacggcttcaaccctctc
ctctcctacgacatcaatgcccactacgtagactcttcctatatcctgtggaaaacccgg
cgctacagcccgggcattaatggcttacacgaggaaataatggacttcttcagcttcatg
tccccaagaccagaggaggaggccatgagaagggatgtagtgaacagaatagaaagtgtc
atcaaggatttgtggcctacagctcgggtggaaatttttggcagcttcagcacaggtcta
tatcttcctacaagtgacattgaccttgtggtgtttgggaagtgggatcatcccccactt
caggatctcgaacaagctcttaaaaaacacaatgtggccggcaattatcctatcaaagta
cttgacaaagctacagttccaattattaaactcactgatcatcagaccaaggtcaaagtg
gacatcagctttaatgtggagactgcagtgaaagcggcacagttaatcaaaagctacctt
aagaaatacacagttcttccacccttgatcttcgttctgaagcagtttctcttacaaagg
gatctgaacgaagtctttactggaggcatcagctcatacagccttatactaatggccatc
agcttcttgcagttacatcctcggattgacacacggcggaccaacattaacctggggatc
ctgctaattgagttctttgagctctacggtcgtgacttcaactacatgaaaacaggcatc
cgagtgaagaatggaggagcttacctgtccaaggaagagatgctgaaaacgatggaccac
ggaaaccggccttccatgctctgcatagaagatcctgtgcagccagggaacgacgttggc
aggagttcatatggtgtcctgcaagtcaagcaggtctttgattttgcatatatggttttg
agccatggtgtttctcctctgtatgcatacccaaacaaagaatacgacagcactttagga
cggattgtgaaagttagccaagaggtgctgtcctacagggaatggataatcaagaagtgg
ggagccaaacagtgtgccaagcggcaaaacgatgatgtagacacctgtgagcaggagctt
gccagaatgatgctgattgaggatcaaagaaactccccctctcctctgagctcggactcc
ctttcaccttctcccgtgtttcctcccagccctcaacaccattcctcgtcttcctcagcg
tgctcactttcatcgtcttcctctgggagcgacattgagtctgactctccaaaaagtagc
aacagttctatccatctccatcccctcaccttggcttcaatccattcagtgatccaggtg
gctactgacctgggggccacacatccagcgagctttttgcacacttctcaccccgcaccc
catgttcaaatgcctctcccggaaaacctcaccatccctccttccagttgccagttctac
cacgagaaccctccctccattagcgttgtgcaccatcacacgacgcacgccgcacaattc
ccccagcagactaagccaccgagccctctcctcgcccacctaaaccactctcagataggt
gggccgctgcaccacccgtatgcccagagatcctattcccaaggctcactagagcctcac
aagtttggctcaaagcacaaccaaactggtaacatccaatgccataatatctctcaaggc
aacttcagtctgcagcacaggctggttcaccaaactcacaacgtggcgtcatgcttcagg
aaccagcaccagtacaaccgcaacacgtggcgacgcagaaagaaagacgtggtcccagct
ctgaatcagagccaatga
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