KEGG   Gambusia affinis (western mosquitofish): 122830970
Entry
122830970         CDS       T07758                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gaf03400]
    122830970 (mdc1)
DNA repair and recombination proteins [BR:gaf03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    122830970 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 122830970
NCBI-ProteinID: XP_043972745
LinkDB
Position
LG05:complement(18074606..18088461)
AA seq 2113 aa
MDATQAISNSILESEEEEDNEEKIQNERRKPLAKLCILNNPHIPEKELPLFLGDNFLGRD
PNLCTIQLLAPSVSKQHAAISISVYRRRGRVHEVDTEAVVWDQKSMNGTHKGRLKLTPNV
RYALNEGDNLVLGDIPCRYVSSGVDSPSSLGDIATPRQSEANARLSDWDNVDTGSKKCVS
SATKAKRTPVTVGCLSFEKTPVQAQGILVPESDSESESEREGRGNRKQKDVVSTSDSYKS
SLSDSAFLSPPSKVIPESEDESIITPSSSRNGSSRRFGFSLEKMDIDLEKNKSPVFVENG
VEEGEGAANGGMYSEERGHNVKSEACKSPTENSESLRSTLQVSRDADPEFNLDSDTDVEG
GEEEEEEEEVPAGKSDQCPNTVLSHMDSDTDADDDVSDKAPRTSPSTDEATKHSPVASGI
QLEGITVDSDTDVDDDDDPNVTSKATLPQGVHSADFAPTVQSEDFHLDSDTDVDEEEEVG
KRGNPKTDKTLREKSDKPLSPHNLHPDSHTCDKEVTATGLDILSESDTDLEEDSLPAVPA
AAADLPVSSAAAGAPEPESDADTDVDEPVAPHAADEGKPADLRMESDTDVEDEEGSPGEE
EQGQIPHLLRENTAEFPVLLWQNCSTPVHVSEGEVEQMETQVFTSPTSHSHRYTVSSSLR
PALMSSCSDSQEDEDYAVAETQSFIHQTRSCHKGLNPNQASILKSSAVKQEDRSKRDGSF
QLGLSDSSHLQGEVRENTQAYAAVDGGVNMEDTQDYEESAENDSNLDATQPYEVEPPRSS
EMSKTETCVDLTMEATQAYIPEPYDEGSDEDEGLNSARTGVASSALAIAETQPMFSSVED
NEPDCSLEPVKNETERHVTDSESVAETQPVFTSDNEERGDEELSVESMKSAEEQKHPWTS
SAFCLAETQPVRLSDNEESGDDEELSAESLRPSKVETHPNTDAVLSLAETQPLHVSADET
EPMDSCGDHENNSEILLPQKRKAKQLHIDEEESQQRTDSGETQPLTPGEDDDDSESMPCL
RKRKAKPLQLEDETQSLVGSQDSAVESQRSVTYEEEQSSQDFISTQKRKVKPLHIEDEQT
QPLINCEDEDVLPEMESKVLPLTSAEVQKKGRNGKRDGDESVTYPRKRKEKRLHLEEEET
QPVSASESQRKTDETKVSPSTKGTGEQTKTKDDNSQQEVKVVNQKTRRRTARKQEEQEED
KIKRAENENRVKEQKGEKLRGEPEIHKREELMNEGTSKPHLEDDMQLIAASESHRKTDET
KVSPSTKETGEQKKNKDESDRQEVKVVNQQTRERRTTRKQEQDEDKNKRQIKEQRDRKLG
GDETDRHENKELMNEGASKTQLEEETHPVTVSEVCPPNTVKKTDVFDASSISGSMETQLG
EEKEKAQCSSRQTRQMKTENKPLPNTRGRRGKTKSKGDNNQEEVKAANQPTRGRRSTKKQ
DDDERQGSDENKSQIKEEGDKEEREHVETERRNEREEKTKGKPRLKEMKSGSEVEEEKGT
SVETTNTDQEHLTRLEKEKQPKESQEEKDEEENPKGSARVRRSSRRTTTAVCEASSEDVP
ARRTRSRSSSLSSERSVSYINSNALENKGRGRGVKRSSEASQTDTVRSSRRRTTTATAVE
PDAEAQAVSASAKVSRGRSQARGRKTLSQPDVVIKENEQKATEVLQQDEKRKADPKLAGT
SRGQRRATASCSEALVLNDEGLQSNQEKTSADLASPLPKRNMRNRGAKTVKTEPVEETEA
PTATAADETRNKRKAKTSEENPEVDRVQKSTEPGGKEEQQEEIPVGIQGRRTSRASSTQV
KKNKEPLCTQEVKDGKKAAVGAAGKKARGRTTVVQKNKNQELQETQTSGSSLEPPGNEVE
SEISAMTPSQKRRVSSNSSPVAKTLRSSSASPATVSRVQSRSQTYKVLFTGVVVEDGEQV
LARLGGAMARGVSDMNCLVTDKVRRTVKFLCAVAKGVPVVTTQWLEESGKAGRFLSPLDF
IVKDPEQEKKFSFSLQESLRTASSQPLLKGYEIHVTKSVQPELVLMKEIITCCGATFLKK
MPAAHKPRAVVISCEEDLRLCGPAVSASLPVVTAEFILTGILQQRVDLQTHALSPGATNP
HPAEGRGRGRKKT
NT seq 6342 nt   +upstreamnt  +downstreamnt
atggatgcaactcaggcgatcagtaactcgatcttagagtcagaggaggaggaagacaat
gaagagaagatccaaaatgaaaggaggaagccattggccaaactgtgcatcttaaataat
ccacacatccctgaaaaagagttgcccctcttcctgggagataatttcctgggtcgtgac
ccaaatctttgcacaatacagttgttggcaccatctgtgtccaagcagcatgctgccatc
agcatctctgtttaccggagaagaggccgtgtccatgaagtggacacggaggccgtagtt
tgggaccaaaagagcatgaacgggacccataagggacgcctaaagctgacccctaacgtg
cgctatgccctcaatgagggcgacaacttggttttgggggacatcccatgtcggtatgtg
agctccggggtggactccccttcttcccttggtgacatagcgacgccaagacaatcggaa
gcaaatgccagattgtcagattgggataacgttgacacaggaagcaagaaatgtgtcagt
agtgccacaaaagctaagaggactcctgtcacagtcggttgcctctcatttgagaaaact
ccagtccaggcacaggggatcttggtgccagaatctgattctgagtcagagagcgaaaga
gaagggagaggaaacagaaaacagaaagatgttgtgtctacttcagactcctacaaatcc
agtctcagtgattctgcattcttaagccctccgagcaaagtcattcctgaaagtgaagat
gaaagcatcatcacaccgtcctccagcagaaacgggtcaagcagacgcttcggtttcagc
ttggaaaagatggatattgacctggagaaaaacaagtcacctgtgtttgtggaaaatggt
gtggaggaaggagaaggagcagccaacggagggatgtattcagaagaaagaggacataat
gtgaaaagtgaagcctgtaaaagtcctacagaaaacagtgaatcgctcaggtcgacgcta
caggtctccagagacgccgaccctgaatttaacctggatagtgacacagatgtggaggga
ggagaggaagaagaagaggaagaggaggtgcctgctgggaaaagtgatcaatgcccaaac
acagttctgtcacacatggacagtgacactgatgctgatgacgatgtctcagataaagct
ccaagaacgtcgccttcaactgatgaagcaacaaaacattctcctgttgcttctggtatt
cagctggagggcatcacagtggacagtgacactgatgtggatgatgatgatgatcctaac
gtcacctccaaagccacgttacctcagggtgtgcacagcgctgactttgcccctactgtt
cagtctgaagatttccacttggacagcgacacagatgtggatgaggaagaggaggttggg
aaacgggggaaccccaaaacagacaaaacactcagagaaaaatctgataaacctctgtct
cctcacaatctgcatccagacagtcacacctgtgataaggaggtgactgcaactggtttg
gatattttgtccgaaagtgatacggacctggaagaagactcactccccgctgtccctgct
gctgcagcagacctgcctgtgtcatctgcagcagcaggagctcccgaaccagaatctgat
gcagacacagatgttgatgaacctgttgctccacatgccgcagatgagggcaaaccagct
gaccttagaatggaaagtgatacagatgtggaggatgaggagggaagtcctggagaggaa
gagcaggggcagatcccccacctgctaagagaaaatactgcagagtttccggttcttctt
tggcagaactgttctactcctgttcatgtttcagaaggagaagttgaacagatggaaact
caggtcttcacgagccccacttcacattcacatagatatactgtatcttcctccttaaga
ccagcactcatgtcttcttgctcagacagtcaggaggatgaagattatgctgtggctgag
acacaatctttcattcatcagacaagaagttgccacaaaggcttgaatccaaaccaagcc
tccattcttaagtcctctgctgtaaaacaagaggaccggtccaaaagagatggttctttc
cagctgggactgtctgacagcagccacctgcagggcgaggtcagggagaacacacaagct
tacgccgcagtcgatggtggagtaaacatggaggatactcaggattatgaggaaagtgca
gagaatgactcaaacctggatgccacgcagccctacgaagtggagcctcccagatcttca
gaaatgtctaaaacagaaacctgtgttgacttgactatggaggcaactcaggcttatatc
ccagaaccttatgatgaaggttcagatgaagatgagggactaaactctgccaggactggt
gtggcttcatctgcacttgctatagctgaaacccagccaatgttctcttctgtggaagat
aatgagccagattgttccttagaacccgttaagaatgaaacggagaggcacgtgaccgat
tctgaatcggtagcggaaacacagcccgtgtttacaagtgacaacgaggagcgcggtgat
gaagagttgtcagtggagtccatgaagtctgcagaggagcagaaacatccatggacttct
tcagccttctgcctcgctgaaacccaacccgtgcgtctgagcgacaatgaggagagcggc
gatgatgaagagttgtcagcggagtccctgcgaccttcaaaagtggagacgcacccaaac
actgatgcagttttgtcgctagctgaaacccagcccctgcatgtcagcgctgacgaaact
gagccgatggactcatgtggagatcatgaaaataactcagagatccttcttccacaaaaa
agaaaagcgaagcagcttcatattgacgaagaggagtcgcagcagcgcacagactctggt
gaaacgcagcctttgactcctggtgaggatgacgacgattctgagtcgatgccatgcctg
aggaaaaggaaagcaaagccgctgcagctggaagacgagacacaatcactcgttggttct
caagactctgcagttgaatctcagcgttcggttacatacgaggaagaacaaagcagtcaa
gactttatctccacccaaaaaaggaaagtgaagccgctgcatattgaagatgagcagacc
cagcctctgataaattgcgaagatgaagacgtcctaccagaaatggagtcgaaagttctt
cctctcacctctgctgaagttcagaaaaaagggaggaatggaaaaagggacggtgatgaa
tccgtcacatatccacggaaaagaaaggaaaaacgacttcatcttgaggaagaggagacg
cagccagtctcagcttctgaatctcagagaaaaaccgatgagacgaaagtttcaccaagt
accaaaggaacaggagaacaaacaaagactaaggatgacaacagtcagcaggaagtgaag
gtggttaatcagaaaacaagaagaagaactgcaagaaaacaggaagaacaagaggaggac
aaaatcaagagagctgaaaatgagaatcgggtgaaggagcaaaaaggtgagaaactcaga
ggagaaccagaaatacacaagagggaagagctgatgaatgaagggacatccaagcctcat
cttgaggatgacatgcagctgatcgcagcttctgaatctcacagaaaaactgatgagacg
aaagtttcaccaagtaccaaagaaacaggagaacaaaaaaagaataaggatgagagcgac
cggcaggaagtgaaggtggttaatcaacagacaagagagagaagaactacaagaaaacaa
gaacaagatgaggacaaaaacaagaggcagataaaggagcaaagagacagaaaacttggg
ggagacgaaacagatagacatgaaaacaaagagctgatgaatgaaggggcatccaaaact
cagcttgaagaagagacgcatccagtcacggtttctgaagtctgtccaccgaatactgta
aaaaaaaccgatgtgtttgatgcatccagcatttcaggttcaatggaaactcaattagga
gaagagaaagagaaggcacaatgttcttcacgtcaaactagacagatgaagactgaaaat
aaaccattaccaaacaccagaggacggagaggaaaaaccaaatctaagggtgacaacaat
caggaagaggtgaaggcagctaatcaaccgaccagagggagaagaagtacgaagaaacag
gatgatgatgaaagacaagggagcgatgaaaataagagccagataaaggaggaaggagat
aaagaagagagagaacatgtggagacagagagacgcaatgagagggaagaaaaaacaaaa
gggaaacccagattaaaggagatgaaatcaggaagtgaagtagaagaagaaaaaggaaca
agtgtggaaacaacaaatacggaccaagaacaccttacaagactggagaaagaaaaacag
cccaaagaatcacaagaagagaaggacgaagaggagaaccccaaaggttctgcaagagtg
cgaagatcttcaagaagaacaaccacagcggtgtgtgaagcctcaagtgaggatgtccca
gcaaggagaacccgatcccgctccagctccctcagctcagagcggtcggtctcctacatc
aacagcaacgccctggagaacaaagggagaggaagaggagtgaagaggagcagcgaagct
tcccagacagatactgtgagaagcagccgccgaaggacgacgacggcgactgcagtggag
ccggacgctgaagctcaggcggtcagtgcgagcgctaaggtctccagaggaagatcacaa
gcaagagggcggaagaccttgtctcagcccgatgttgtgattaaagaaaatgaacagaaa
gccactgaggttctgcagcaagatgagaaaagaaaagcagaccctaagcttgctggtacc
agcagggggcagcggcgagccactgccagttgttctgaagctttagttttaaatgatgag
ggccttcagtcaaatcaggaaaagacatctgctgatctagcatcccctctgcccaagaga
aacatgaggaacagaggtgcaaaaactgtaaagaccgagcctgtagaggaaactgaggct
cccacagcgactgctgctgacgaaacccgaaacaagagaaaagcaaaaacaagtgaggaa
aaccctgaagtggatagagtccaaaaatcaacagaaccaggagggaaagaggagcaacag
gaagagattcctgttgggatacaaggcaggagaacaagcagagcctcaagcactcaggtg
aagaagaacaaagagccgctctgtacacaggaagtaaaagatggaaagaaggcggcggtg
ggggctgctgggaagaaagccaggggtcgaacaaccgtggtccagaaaaataaaaaccaa
gagctgcaggaaactcagacgtctggttcttccttggagccacctggaaacgaggtcgaa
tcagagatctcggccatgactccttcccagaagcggcgggtttcctcaaactcctccccc
gtagctaagacgctgcgttcctcctctgcgtctccagctacagttagccgagtacaatcc
aggagccaaacctacaaggttctgttcacaggagtggtggttgaagatggagagcaggtg
ctggctcgtttaggaggcgccatggccagaggcgtctccgacatgaactgtctcgtgaca
gataaagtgcgaaggacggtcaaattcctgtgcgccgtggctaaaggtgtcccagttgtc
accactcagtggctggaagagagcggtaaagctgggcgcttcctctctccgcttgatttt
attgtgaaagatccggagcaggagaagaagttcagcttctccctgcaggagtctctgagg
actgccagcagccagcctctcctcaagggatatgagattcacgtcacgaagtcggtacag
ccagaactggttctcatgaaagagatcatcacctgctgcggcgctaccttcctgaaaaag
atgcccgcggctcacaagcctcgggccgtagtgatttcctgtgaggaggacctgcggctg
tgtggccccgccgtgtctgcgtctcttcctgtcgtcactgctgagtttattctcacagga
atcctgcagcagagagtcgatttgcagactcatgcactttctcccggtgccaccaacccg
catcctgctgagggtagaggaagaggccgaaagaagacttag

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