Gambusia affinis (western mosquitofish): 122831020
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Entry
122831020 CDS
T07758
Symbol
ncapd2
Name
(RefSeq) condensin complex subunit 1 isoform X1
KO
K06677
condensin complex subunit 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122831020 (ncapd2)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
122831020 (ncapd2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
Adaptin_N
HEAT
HEAT_2
PDS5
Cnd3
SCD
INTS1_R4
PCSK9_C2
Motif
Other DBs
NCBI-GeneID:
122831020
NCBI-ProteinID:
XP_043972845
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All DBs
Position
LG05:complement(18806769..18832048)
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AA seq
1448 aa
AA seq
DB search
MRHRFVDLARGGIKFENLQTETVYGRWEGRQEAIFRKRFSVLKRAAMEREMSWDFFVPVC
VGDLVKTGGINQYVVQDVIPAKQLPSHLNKFKMGLRSQGPLCILEHFDTGYSVLQHFNLL
ELGVKEDTLELLVKVVSELAVSLPAALTSTTFSAAERKEKLNAVKMSVFLLCKLTESLES
VSYRQSIVTAPVKGSKKGKGGGEGLLQWDSERERVLHALVQLLQLDIRSLWSLSLVEEEF
ISCVTCCCYKLLENPTISHVKNKPTRDCIIHLLGILITKYNHLLGASVKVIQMLQHFEQL
SSVFAQAVSVWSTEYGVRAIIGEVIREIGQKSSEELAREGSGVKAFSSFLSELSGLVPEL
MIPNISVLITHLEGESHTMRVAVCEVLGEILVRVLCGDGLDESGRADRDRFFDILQEHLH
DTHSHVRARVLQVYTRIVNSKALPLCRYSEVMGLAVGRLMDKSINAVKSAIQLLAAFIAH
NPYSCKLSSADLKKPLETETAKLREMKEKLEGKAPVAVIKATELWAAMEPELLVTVRTTL
EPTSEAEEENNEGGEVEDEKPEDDDRATAVKIAQYLRVNKYRNAVKLCVKAHSWFPESEM
FASLSTVTPESLMDTLGLIFKGSDEDASDVCQNLPPTTQRESDKEGDEGDLKKQEMLVQY
LRNMETFSLQVEQAISVINNMLYLKTTSVVQEAVQFCVTVHEFSVANSVSGVRKMLPLVW
STDAAIKDAVVQAYRRLYLNPQGDTVRMKAQTLVDSLSELMVDASLGTIQCLEEIVQEFF
GSGSHLQSTVIQVLWERFTGKREASVLHKRAAVLLLGMAARAEREVVLSNLDTLCSVALG
EKVTEDFLLARDTVITICSITDHVRQSKGAPFRLPQDHQLFTCLTQAVADGVVMEDPYWQ
SFMEQAVRLIYFLAESPDQLCSRLLQRSARLLLDQIAEGGEVNKDVGQIHDASQDSGDQE
EQVNCVCLAQLLALCGCVAFWQVSHLERSVSAELRRRRGETEEREEKEKGPGSKAKQQLA
NESAMEEELGLIGASAEDTEAELIRKICETELLAEDNLLSAFLPLLVKVCSSPGRYSHPQ
LTTAACLALSQYMMISPSVCEDNIRLIFTVLERSTLPVVRANAIIALGDLTVRFPNTLEP
WTQNLYARLSDEVPSVRQTAVTVLTQLVLKDVLKVKGQVSEVAVLLIDPEPHIISLALNF
FNELATKDNAIYNLLPDIISRLSDPERGMSSEDFNTIMKQLFSYITKERQTESLVEKLCQ
RFRTAKTERQWCDLAMSLSLLSMCERGFKRLQECWECYSDKLTESGVYQPLLTITAKLRR
GAKPQFKAQIDDFEKRLTAVHTRGLENVESPETEENQGEEGTSEKTSSRTLLPTRGRQKR
RGQTKSLVSSHGDDSFVTPQKSRKSKKPVISFSSDEEEDEDDAVMAESETPKVTTPISRT
SRRTRLRN
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatcgtttcgttgatttggcgcgcggtggcatcaaatttgaaaatctccagacg
gaaaccgtttacggacggtgggaagggaggcaggaggcaattttccgtaagagattttca
gtacttaaacgtgctgccatggaaagagagatgtcgtgggacttttttgtgccagtgtgt
gtgggagatctggttaaaacgggaggtattaatcaatacgttgttcaagatgtgattccg
gcaaaacaactgccatcccatctcaataaattcaagatgggactacgaagccaaggccct
ttatgtatactggaacactttgacacaggttacagtgtgctgcagcattttaatttgttg
gagcttggggtgaaagaggataccttggaattacttgttaaagtggtcagtgagctggct
gtttctctgccagcggctctcacctccaccaccttctcagctgcagagcgcaaagaaaaa
ctaaatgccgttaaaatgagtgtcttcttgctatgcaaactcacggagagccttgaaagt
gtctcctacagacaaagtattgtcacagcacctgtaaagggtagtaaaaaaggtaaaggt
ggtggagaaggactgctgcagtgggattctgagagagagcgggttctgcatgctcttgtc
cagctccttcagctggacatccgttctctctggagcctctccctggtggaagaggagttc
atcagctgtgtgacttgttgctgctacaagttattggagaatccaaccatcagtcatgtc
aagaacaaaccaacaagagattgtataattcaccttctcggcatactgatcaccaaatac
aaccacctattaggtgccagtgtaaaggtcatccagatgctgcaacactttgagcagttg
tcctcagtatttgcacaagctgtgtctgtgtggagcacagagtatggagtcagggcaatt
attggagaagtgataagggaaattggtcagaagtcaagtgaagagcttgccagagaaggt
tctggtgtcaaagctttttcctctttcctgtcagaactcagtggcctggtaccagaatta
atgattcccaacattagtgtcctcatcacccacctggaaggagagagccacacaatgcgt
gttgctgtttgtgaggtgcttggagaaattcttgtacgagtcctatgtggcgacgggctg
gatgagtctggcagagccgaccgcgaccgcttctttgacatattgcaggaacatctccat
gacacacactcccatgtcagagcacgcgtgctccaagtttacacacgaattgtcaacagc
aaggcgctgcccctgtgtaggtacagtgaggtgatggggctcgccgttgggcgcctgatg
gacaaatccataaatgcagtgaagagcgccatccagctgttggcagctttcattgcgcac
aatccctatagctgcaagctgagcagtgcagatctgaagaaacctttggaaacagaaaca
gcaaaactcagagaaatgaaagaaaagctggagggaaaagcacctgtcgcagtgatcaag
gcgactgagctgtgggctgctatggagcctgagcttcttgttactgtcaggacaaccctg
gagcccacaagtgaggcagaggaagagaacaacgaaggtggggaggtggaggacgaaaaa
ccagaagatgatgacagagcaactgcagtgaagatagcgcagtacctccgtgtcaacaaa
tacaggaatgctgtgaagctttgcgtaaaagctcacagttggttcccagaatcagagatg
tttgcctctctctccacagtcacccctgagagtttaatggacacactgggcttgattttc
aaaggctctgatgaagatgcttcagatgtctgtcagaatttgccaccaaccacacaaaga
gagagcgataaagagggagatgagggggacctgaagaagcaggagatgttggtgcagtac
ctcagaaacatggaaacattttccttacaagtggaacaagcaatatctgtcatcaacaac
atgctgtatttgaaaacaacttcagttgtccaagaagcagtgcagttttgtgtgacggtg
cacgaattcagtgttgccaactctgtcagtggagtgaggaagatgttgcctctggtttgg
tcaacggatgctgccattaaagatgctgtcgttcaagcctacagacgcctgtacctgaac
ccgcaaggagacacagtcaggatgaaagcacagactctcgtcgacagtctctctgagctc
atggtggatgcatctctgggtactatccagtgtcttgaggaaattgtgcaggagttcttt
ggcagtggcagccatctccaatccaccgtaattcaggttttgtgggagagatttacgggt
aaacgagaagcctctgtcttacacaaacgagctgcagtgttactgctgggcatggcagca
cgggcagagagagaagtggtgctcagtaacttggacactctttgttctgtggctctggga
gaaaaagtgactgaagactttcttcttgcaagagatacagtgatcaccatttgcagtatc
actgatcatgtcaggcaatcaaaaggggctccattcagactcccccaggaccatcagctg
tttacctgccttacacaggctgttgctgacggtgtggtgatggaagacccttactggcag
agctttatggaacaggccgtccgtcttatctacttcctggctgagtccccagaccagctg
tgctcccggctgctccagagaagcgctcgacttttacttgatcagattgctgaaggcggt
gaagtcaacaaggatgtcggccaaatccatgatgcatctcaagactccggtgaccaagaa
gaacaagtgaactgtgtgtgtctggcccagctgctggcgctctgcggatgcgttgctttt
tggcaggtgtctcatcttgagcgcagtgtgagcgctgagctgcggaggaggagaggagag
acagaggagagggaggagaaggagaaaggcccaggcagtaaagctaagcagcagctggcc
aatgaaagtgccatggaagaggagctcgggttgattggggcgtctgctgaagacactgaa
gcagagctcatcagaaaaatctgtgaaacagaattactggctgaggacaacctgctcagt
gcgtttcttcctctgctggtgaaagtctgcagttctccaggacgctattcccaccctcag
ctcaccactgctgcctgtttggcactgtctcagtacatgatgataagcccatcagtgtgt
gaagacaacatccgcctcatcttcacagtgctggagcgctccactctccccgtcgtcagg
gccaacgccatcatagcgttgggagacctcacagtgcgttttccaaatactttggagccc
tggacccaaaatctgtatgcaaggttgagtgatgaggtcccatctgtgaggcagacggct
gtgacagttcttactcagttggtccttaaggatgtgctaaaggtcaaaggccaagtcagc
gaggtcgctgtgctgctaattgacccagagccgcacatcattagcctggctctaaacttc
ttcaatgagctggccactaaggacaacgccatctacaacctgctgccagacatcatcagt
cgcctttcggatccagagagaggaatgagctccgaggacttcaacaccatcatgaaacag
ctattttcctacatcactaaagagagacaaactgaatctttggtggagaaactgtgtcag
cgcttccgaactgcaaaaactgagcgccagtggtgtgacttggccatgtctctgtccctg
ctctccatgtgtgagcgtggctttaagaggttgcaggaatgctgggaatgttacagcgac
aagctaaccgaatccggagtctaccagcctctgctcaccatcacagccaagcttcgtcgt
ggagccaaacctcaatttaaggcccagatagatgactttgagaagaggctgacggcggtt
cacacccggggcttggagaacgtagaaagtcctgagacggaagagaaccaaggggaagaa
ggaacttcagagaagaccagcagtcgcacactgctacccaccagaggccgtcagaaaagg
agaggtcaaacaaagtcgttggtctccagccacggcgatgacagttttgttacgcctcaa
aaatcacgcaagtctaagaaaccagtgatcagcttcagcagcgacgaagaggaggatgag
gatgatgctgtcatggcagagagcgagacgcccaaagtgacgacgcccatctcccgcacg
tcgcgccgaactcgcctcagaaactga
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integrated database retrieval system
