Gambusia affinis (western mosquitofish): 122831059
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Entry
122831059 CDS
T07758
Symbol
pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122831059 (pop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gaf03009
]
122831059 (pop1)
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122831059 (pop1)
03029 Mitochondrial biogenesis [BR:
gaf03029
]
122831059 (pop1)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
122831059 (pop1)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
122831059 (pop1)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
122831059 (pop1)
Mitochondrial biogenesis [BR:
gaf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
122831059 (pop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
GCV_T_C
Motif
Other DBs
NCBI-GeneID:
122831059
NCBI-ProteinID:
XP_043972906
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Position
LG05:complement(4286684..4295639)
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AA seq
782 aa
AA seq
DB search
MPNHITAGAFARARAAEVSAMLKAATQTMGSSHVFQALPKHMRRRATSHNTKRLPRRLRD
VANRMKRKSLLAGLKKKKEPVKSKSRKARRRHGNLLMEFNRRQRKNIWLETHIWHAKRFH
MVKKWGYCLGVRPTYKCYRPCYRAMSSHCLLQDLSYYCCIELKGEEDKLLAALTQLTCKE
AGMSNFRDLRGRAFCGLKKKKKEPVKSKRDGTRLPTSPVTWRSSSTGLVINDLTMEIIRY
RLIGPQSHSVLAETLEAATVCDELKSSPLWWPEHCKDRSNMKLHQQQTDVFNVLKGIYST
GELPPGTVLGLTVDDPRLTLPRQKVKAAPCVNQDQGDEEKRNQLMLQGVPLQCCQSFLWE
RSVRENVTDNKISEQELNRMRSELLVPGSRLGPGPQQGRVPVLLVHQPGKQVGDELGSWG
AGWDLLLPKGWGMAFWVPLVYRGVRVAGLHMSLKHSQNKAAPHFPHDYPDCPAGSRFQEE
QEAEFLDTFRRHPPAKRTNYIKHGCLAPFRCPWQQLAEEWELLATDGGADRKGDGQTQMT
RKSHEVVEEVTSQQNVAAASPPSCFTVLRNRRSLRLLSSWCRPPTCRRQRWGRGAAAAAL
PLSDSAVTSFHAAHKMSVVWVRLTLLSKGKPEAHAMLCVPTAEDLKLFGKSPESCGPQEP
PHKDHYKSRINRKKKSAKTATPSQESDHQTASTDLHSPSDLILGLWPDPLPSVASHCSRV
TLGWVTQGDFSLSVGRGEALGFVSVSGLLHTLLKQPPELRGTLLLRNPASLHYRFVRVNI
DV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaccacatcactgctggagcttttgctagggccagagcagcagaggtaagcgcc
atgctgaaagcggccacccagacgatgggcagcagccacgtgtttcaggctctacccaag
cacatgaggcggcgggccacgagccacaacaccaagcggctccctcgcaggctgagagac
gtggccaacaggatgaagaggaagagccttctggctggcttgaagaagaaaaaagaaccg
gtgaagagcaagagccgcaaagctcgccgtcgccacgggaacctgctgatggagttcaac
cggcgccagaggaagaacatttggctggagacgcatatctggcacgccaagcgcttccac
atggtgaaaaagtggggctactgtctgggggtcagacccacatacaaatgctaccggcca
tgctacagagccatgagcagccactgcctcctacaggatctttcttattactgctgcatt
gagttgaagggggaggaagacaagctgctggctgctctgactcagctgacatgcaaggag
gctggaatgagtaacttcagagacctaagaggaagagccttctgtggcttgaagaagaag
aaaaaagaaccggtgaagagcaagagagatggaaccagattgcccacctccccggttacc
tggaggtccagctcaactggactagttataaacgatctcacgatggagatcatacgctat
cgtctgattggaccacagtctcattctgtgctggcggagactttggaggcagctacagtc
tgtgatgaactgaagtcttctcccctctggtggcctgagcattgcaaagaccggagcaac
atgaagctccatcagcaacaaacggatgtctttaatgtactgaaaggtatctattcaact
ggagagctccccccaggaacggtgctggggttgaccgtggacgacccccgactgactcta
cccagacagaaggttaaagccgcaccctgtgtgaaccaggaccaaggtgatgaggagaag
aggaaccagttgatgttgcaaggagtcccactgcagtgctgccagagcttcctgtgggag
cggtctgtccgggaaaacgtcactgacaacaagatatctgagcaggagctgaacaggatg
aggagtgaactgctggttccaggctccaggctgggccccgggccccaacagggccgggtc
cccgtcctcttggttcaccagcctggtaagcaggtgggtgacgagctgggctcttggggg
gccggctgggacctgctgcttcctaaaggctgggggatggccttctgggtcccgctggtg
tacagaggggttcgagtcgccggtctgcacatgagtctgaaacactctcagaacaaagcg
gctccccactttccccacgactatccggactgccccgcaggatcccgctttcaggaggag
caggaggctgagttcctggacacatttagaaggcatccgccagctaagaggaccaattac
ataaaacatggctgtctggctccttttcgttgcccctggcaacagctggcagaggagtgg
gagctcctggcgacggacggaggagcggacaggaaaggagacgggcagacccagatgacc
aggaagagccatgaagtggttgaggaagtgacatcacagcagaatgtagctgcagctagt
cctccgagctgcttcactgttctgaggaacagaaggtctctcaggcttctctccagctgg
tgcagacccccgacatgcagaagacagaggtggggtcgcggggcggctgcggcggcgctc
cctctcagcgactcggcagtgacgtctttccatgccgctcacaagatgagtgtggtgtgg
gtgcgcctaacgctgctgtccaaagggaaaccagaagcccatgccatgttgtgcgtgccg
actgcagaggacctgaagctgtttggcaagagcccagaaagctgtggccctcaggagccc
ccccacaaagaccactataaaagtagaattaaccgcaagaagaagagcgccaagacagca
actccatcacaagaatcagaccaccaaactgcatccacagacctccattcgccctctgac
ctcatcctggggctctggccggaccctctgccgagcgtggcgtctcactgctcccgggtg
acgctgggctgggtcacccagggggacttctccctgtctgtggggcgtggggaggctctg
ggcttcgtcagcgtctccggtctgctccacacgctcctcaagcagccgccggagctcaga
ggaacgctgctgctgcgcaaccccgcctccctgcactaccgcttcgtcagggtcaacatc
gacgtatga
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