Gambusia affinis (western mosquitofish): 122831195
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Entry
122831195 CDS
T07758
Symbol
nbn
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03440
Homologous recombination
gaf04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122831195 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
122831195 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaf03032
]
122831195 (nbn)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122831195 (nbn)
DNA replication proteins [BR:
gaf03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
122831195 (nbn)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
122831195 (nbn)
BRCA1-C complex
122831195 (nbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
MU2_FHA
Motif
Other DBs
NCBI-GeneID:
122831195
NCBI-ProteinID:
XP_043973149
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All DBs
Position
LG05:complement(17062586..17074599)
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AA seq
842 aa
AA seq
DB search
MWILTPQQAGGETFYLLPGKEYVVGRKNCDILLASDQSISRSHAQLTVTDLTLTLKDTSK
YGTFVNSQQLTAPVELSSGDNVTFGVFQSRFSVVFLDKPVVCSSCLDAAGKTSLSQALSA
LGGKLVNSWTPDCTHLAMPTVKVTIKTISALLCCRPIVKPEYFSELSRAAQQKSAPPKPE
SFVPEIDEPSLSKEDVNLTTTAPRKRLFTGKTFVFLTPKQLKRLGAAVSFGGGSSRLLEE
GSLPRDLLESPHSCVVEVTTGSSQTLLPPSATEWANSVKSIIHRKGLRVITESEIGQAAI
YASCEKFCNPSCPIIDSDPAQKVKPRIPSASLSQSVAVDETVLPAASQNITAYAVNTETS
QKMEVCHVTGLAAVRGTPEKKQNQKAAQLPGSKPTVQKSTSELIVEDTMSSSFGAANNTD
SQRRKPDPKPKGFGNTNFRPPPSAPKTNGGSRTFLHTQSSQKQKTSPQTSPQKQSTLTNF
FQPVNRKRPLEEESSDVMSAPKRPAPESSISSKDTNSLRVSKKMPSLPLEGPSAVSETPL
ESVSDLFSGRAEHLAEEPRSRKRKEMEEEIKMEELESIMSEDMDYLGDESPSSHGQKEKV
MVHHGLAKQKQSSHTVESSTKKQRVHQEQTVGAGQRPGLGLDKERSQQNLGEQSDQHDVS
NKTDDNISPNRDSSRPPKTPAASETTEEKVFEADDASFIEDVELLQVDIPQPAEETKASV
KPVQIKEEVKESKIDEDLPQKLLMVEFRSLMVAAPSKPEPKQPQNNGHAKNFKCFRKKHL
PGADGFPHIIGGSDLLVHNRGTNSDLDEWLKGAAEGERQNKREETIGDDLFRYNPTKLTK
RR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactgactcctcagcaggccggaggtgagacgttctatctcctccctggtaaa
gagtacgttgttggccggaagaactgtgacatccttcttgccagtgaccagtccatcagc
aggtcccatgctcagctcactgtgaccgatctgaccctgactctgaaagacacgtccaaa
tacggcaccttcgtcaacagccagcagctgacggcgcccgttgagctgtcgtcaggggac
aatgtcacctttggtgtttttcaaagcagattcagtgtggtgttcctggacaaaccagtg
gtgtgctcgtcatgtttggacgccgctgggaagacgtcgctctctcaggccctttcagcc
ctgggtgggaagctggtgaacagctggactccagactgcacccacctggccatgccaact
gtcaaagtcaccataaagacgatctctgctctgctgtgttgtcgccccatcgtgaagccg
gagtatttctcagagctcagcagagctgcgcagcaaaaatcagctcctcccaaaccggag
agttttgtccccgaaatcgatgagcccagtttgagtaaagaggacgttaaccttacgacg
acagcgcctcggaaacggctttttaccggaaagaccttcgttttcctcacacccaaacag
ctgaagcggctcggcgctgcggtgagttttggcggaggcagcagtcggctgctggaggag
ggctccctcccccgcgacctgctggagtctcctcacagctgcgtggttgaggtcaccact
ggcagctcccaaactctgctccctccttcagccacagagtgggcaaactctgtgaagagc
atcatccacagaaaaggtcttcgagtcatcacagagtccgagattggtcaggctgccatc
tacgcgtcttgtgaaaagttctgcaatccatcctgccctatcatagactcagatcctgca
cagaaagtaaaacccagaatccccagtgcttcgctgtcacagagcgtggctgtggatgaa
actgtgctaccagcagcatctcagaacatcaccgcttacgccgttaacacagagacgtca
caaaagatggaggtttgtcatgtgactgggcttgcagccgtcaggggaactcctgagaaa
aagcagaaccagaaagcagctcagttacccggatccaaaccaaccgttcagaaatcaacc
agcgagttgatagtggaggacacgatgagctcatctttcggcgctgccaacaacacagac
tcacagaggaggaaacctgaccccaaaccaaaaggttttgggaacaccaactttagaccc
ccgccgtctgctcccaaaaccaatggaggcagcaggaccttccttcacacacaatcctct
cagaaacagaaaacgtctccacaaacctccccacagaaacagtcgactttgaccaacttc
tttcagcctgtcaacaggaaacgacctttagaggaagaatcctcagatgtcatgtcagca
ccgaagcggccggctcccgaatcatccatttcttcgaaggatacaaactcacttagagtt
tctaaaaaaatgccatcacttcccctcgagggaccgtctgctgtgtccgagacgcctctt
gaatctgtgagcgatttgttctctggacgggcagaacatctcgcagaggaaccgcggagc
agaaagaggaaggagatggaagaggagataaagatggaggaactggagtcaattatgtct
gaggatatggactacctgggcgatgaatccccaagtagtcacggccagaaagagaaagta
atggtgcaccacggtttggccaaacaaaagcagagctcacacactgtggagtcttcaact
aagaagcagcgcgtccaccaagagcaaacggtcggagcgggtcagaggcctggtttgggt
ctggataaggaacgttcccaacagaacctcggggagcaatctgaccagcatgacgtctcc
aataagacagacgacaacatttcacctaatcgtgactctagtagaccccctaaaacacct
gctgccagtgaaactacagaggaaaaggttttcgaagctgatgatgcatcttttattgag
gatgtagagctacttcaagtagatattccccagccagcagaagagaccaaagcatctgtc
aaacctgtgcagatcaaggaagaggtgaaagagtcaaagattgatgaagatcttccccag
aagttgctgatggtggagtttcgatctctcatggttgctgctccttcaaaacctgaaccc
aaacagcctcagaacaacggacacgccaagaacttcaaatgtttccgcaagaaacacctt
cctggtgcggacggcttcccgcatatcattggaggatccgatctgctggttcacaacagg
ggcacgaactcagatctggatgaatggctgaaaggtgcagctgagggggagcgtcagaac
aagagggaagaaacaataggagacgatctgttcaggtacaatcccaccaagctgaccaag
agaagatga
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