Gambusia affinis (western mosquitofish): 122831199
Help
Entry
122831199 CDS
T07758
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gaf03009
]
122831199 (dcaf13)
04121 Ubiquitin system [BR:
gaf04121
]
122831199 (dcaf13)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
90S particles
Other 90S particles
122831199 (dcaf13)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122831199 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
ANAPC4_WD40
KNTC1_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
NBCH_WD40
MIOS_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
122831199
NCBI-ProteinID:
XP_043973159
LinkDB
All DBs
Position
LG05:complement(5202528..5211581)
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDDYVRETKHDIQRVPRNYDPSLHPFEVGREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPQSLSTLLSGSCDGEVKVWNLTKHECVRTLQAHEGFVRGMVVRYC
GTSFFTIGDDKTIKHWKMEAPGYGEEEEPLNTVLGKAVFTGLDHHQKNAVFATCGHQVDI
WDEQRSTPIRSFTWGVDSFSSVRFNPVETELLGSCASDRSIVLYDMRESTPLKKVIMTMR
TNTISWNPMEAYYFTCANEDYNLYTYDMRHLENPVKVHVDHVSAVLDVDYSPTGREFVSA
SFDKTIRIFPKDSASSREVYHTKRMQHVICVKWSADSKYVLSGSDEMNIRLWKANAAEKL
GVLSPREKQAIHYSQKLKEKFQHHPQIKRIARHRHLPKVIHHQKNELRVMKEARRRKEMN
VRKHSKPGSVPVVSEKEKHVVSVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaaggtcctttcaagaaacccggatgattatgtccgggaaaccaaacacgat
attcagcgagtccccaggaactacgacccctcccttcatccgttcgaggtgggcagagaa
tacactcgggctctgaacgccacaaagttggagcgcgtgtttgccaagccttttctggcc
tccctggacggacacagggatggtgtgaactgtctggccaagcacccccagagtctctcc
accctgctctctggctcctgcgatggcgaggtcaaagtgtggaatcttaccaaacacgag
tgcgtccggactctccaggcgcatgaagggtttgtccggggaatggtcgtcagatactgc
ggtacttccttctttacgatcggagatgacaaaaccatcaaacattggaaaatggaagcg
ccgggctacggagaggaggaggagcctcttaacactgtccttggcaaggccgtgttcaca
ggactggaccatcaccagaagaacgctgtgtttgcaacatgcggccaccaggtggacatc
tgggacgagcagaggagcacccccatccgctccttcacctggggcgtcgacagcttcagc
tccgtccgttttaaccctgtggagacagagctccttggaagctgtgcctctgacagaagt
atagttttatatgacatgagggaatcaacacctcttaaaaaggtgatcatgacaatgagg
accaacacgatcagctggaacccaatggaagcttactacttcacttgtgcaaatgaagac
tacaacctgtacacatacgacatgaggcatctggagaatcccgtcaaagtgcacgtggac
catgtctccgccgtgctggacgtcgactactctcccaccggacgggagtttgtctccgcc
agcttcgacaagaccatccgcatcttccccaaagactctgcaagcagcagagaagtctac
cacaccaagcgcatgcagcacgtcatctgcgtaaagtggtcggcggacagcaagtacgtc
ctgagcggctcggacgagatgaacatccggctgtggaaggcgaacgcggcagagaaactg
ggagtgctgtcgcccagagagaagcaggccattcactacagccagaagctgaaggagaag
ttccagcaccacccacaaatcaagcgcatcgctcgccaccgacacctgcccaaggtcatc
caccaccagaagaacgagctgagggtcatgaaggaggcccgccggcgaaaggagatgaac
gtccgcaagcacagcaaaccaggaagcgtgcctgtggtgtctgagaaagagaaacatgtt
gtcagtgtggtgaaatag
DBGET
integrated database retrieval system
