Gambusia affinis (western mosquitofish): 122831202
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Entry
122831202 CDS
T07758
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122831202 (irx4a)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122831202 (irx4a)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
122831202
NCBI-ProteinID:
XP_043973161
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Position
LG05:11178453..11184661
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AA seq
474 aa
AA seq
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MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSIADSGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSPYTGGQGYGNYVTYGTDASAFYSLGTFDTKDAAASAHAGITQTTA
YYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDEDEEGSQEGQIKSENTDDDT
RSRADKELQLSDLDDFDTLESESSECEMKHRYHMNTHMSTTSDCSAEHLIKNASLKISVP
VPLGGEQDLGKTCIKTSPEDFQPDSMQHQAKSCYTQQQQGHQLLDGKPRIWSLAQTATSL
NQTEYPSCMLRCQAPPSSLTQSPAATSPVTVLDNRQDSPVTTLRNWVDGVFHDPLFRHST
LSQALTNTTVSWTTNTKGSVLEAERSAAALQQHQDPPKDSAMSFPKTINKLFCS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccatactcgtctgctccacaattcctgatgacaacc
aactctcttaccacttgctgcgagtccacgggtagatccatagcggactccggggtagcg
gcgtctggacagacacctgtctactgtcccgtgtatgagagccggctgctggccacggca
aggcatgaactgagctccgcggccgcgctaggggtgtacggcagcccctacaccggcggt
cagggctatggaaattatgttacatacgggacagacgcgtcggctttctactcgctgggt
acttttgatactaaagatgctgcagcttctgcgcatgcgggaatcacacagacaactgct
tactacccttatgatcctaccttgggacagtaccaatatgacagatatggttctatggat
ggggggacaaggcgaaagaacgctacccgtgagaccaccagcaccctgaaggcctggctg
caagaacacaggaagaacccgtacccgaccaaaggggagaagatcatgttggccatcatc
accaagatgaccctgacacaggtctccacctggttcgcgaatgcccgcaggaggctgaag
aaggagaacaagatgacgtggccgcccagaaacaagggctcagaggagaagagatatgat
gaggatgaggaggggtctcaggaggggcagataaaaagcgagaatactgatgatgacacc
agaagtcgagccgacaaggaactgcagctgagcgacctggacgattttgacacgctcgag
tctgaaagctctgagtgtgagatgaagcatcggtaccacatgaacacgcacatgtcgacg
acaagcgactgctccgccgagcacctcattaagaacgcgtctctgaagatctccgttccg
gtgcctctcggcggggagcaggacttgggtaaaacctgcatcaaaacgagtccggaggac
ttccagccggacagcatgcagcatcaggcaaagtcgtgctacactcagcagcagcagggt
caccaattattagacgggaagcctcgaatctggtctttggcacagacagcaacgtccctg
aaccagactgaatatccgtcctgcatgctgaggtgccaggcgcctccctcctcactcacc
cagtcccccgccgccacttcccccgtaaccgtcctggacaaccggcaggactcgccggtc
accacgctgaggaactgggtggacggggttttccacgaccccctgttcaggcacagcact
ttgagccaggctctgaccaacacgaccgtctcctggaccacgaacaccaaaggcagcgtg
ctggaggcggagaggagtgcggcggccttgcagcagcaccaagacccgcccaaagacagt
gccatgagtttcccaaaaactatcaacaaacttttttgctcctaa
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