Gambusia affinis (western mosquitofish): 122831244
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Entry
122831244 CDS
T07758
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122831244 (irx1a)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122831244 (irx1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
122831244
NCBI-ProteinID:
XP_043973239
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Position
LG05:complement(10889156..10893914)
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AA seq
495 aa
AA seq
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MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGTTEIGGSPSATAAAVTSVLSMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPATFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGNRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDENDGDQSNEDDDDKSTEG
GREHRSSLGVPGDLDSLEKRRAFALQAHEAFEKSKNVMSVHAGGKENSDGNNNTTRVLSP
DRPGNFPLPSNNKPKIWSLAETATSPDSSSQKPSSPCAPGANSNHPSAPHQIQTHPAFLP
SHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHHSSHPLSAQQHQQQQPTS
VVVSPVAASAALSNDSKGPADTHSPKHIEHERSDSPPTQTLKSSFRPIQDRSSLPSSARS
PQDATQRVLTALSSA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagttaggctacccgcagtatctaagtgcctcccaggctgtatacggg
agcgagagaccgggagtgcttacgccttcatccagaggagggaccacggaaatcggtgga
agtccgtccgccacggcggcggccgtcacgtcggtgctgagcatgtatgcaaacccgtac
gcacacaactacagcgcgtttttaccttacaccagcgcggatctggctctcttctcacaa
atggggtctcaatatgagctcaaggacagccctggcgttcaccccgctactttcgcggcc
cacacgtctccagccttttacccatacggccagttccagtatggcgacccggcgaggccc
aagaacgccaccagggagagtaccagcacactgaaagcttggctcaatgagcacaggaag
aacccgtacccaacgaaaggcgagaagatcatgctggccatcatcaccaagatgacactg
acgcaggtctccacctggttcgctaatgccaggaggaggctcaagaaggagaacaaggtg
acctgggggaacaggagcaaggaggacggtgaagacggaaacttgttcggcagtggagac
gaggcagagaagaacgaagatgaggaggagatcgatttggagagcatagatatagacaaa
atcgacgagaacgacggggatcagagcaatgaggacgatgacgataagtccacggaggga
ggcagggagcacaggagcagcctaggcgtgcccggagacttggacagcttggagaaaaga
cgggccttcgccctacaggcccacgaggcctttgagaaatccaagaacgtgatgtcggtt
cacgcagggggcaaggagaactcagatggcaacaacaacaccacacgagttctgtcccct
gacagacctgggaattttccccttccctctaacaataaacccaaaatctggtctctggcg
gagaccgctaccagccccgacagctcgtctcagaaaccttcctccccttgtgcgccaggg
gccaacagtaatcatccatcagcgccccaccagattcaaacccacccggccttcctcccc
agtcatggactgtacacttgccagattggaaagttccacaactggaccaacggagccttc
ctgggccagaactccctgctgaatgtcagatcttttctgggagtaaaccagcaccatcac
caccaccacagcagccatcctctctcggcccagcaacatcagcaacagcagccgacatcg
gtggtggtgtcgccggttgcagcttcagcagcgctcagcaatgacagcaagggcccagca
gatacccacagtcccaaacacatagagcacgaaagatccgattcacctccaacacagacc
ctcaagtcgtcatttcgtcctattcaagacagatcctctctgccttccagcgccaggagt
ccccaagacgccacgcaacgggtcctcactgctctctcgtcggcttga
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