Gambusia affinis (western mosquitofish): 122831270
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Entry
122831270 CDS
T07758
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122831270 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gaf03310
]
122831270 (nr1d2a)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122831270 (nr1d2a)
Nuclear receptors [BR:
gaf03310
]
1. Thyroid hormone like
1D. Rev-Erb
122831270 (nr1d2a)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122831270
NCBI-ProteinID:
XP_043973282
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Position
LG05:complement(23371212..23379122)
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AA seq
577 aa
AA seq
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MPEDIGTAKPGGVIAYISSSMGSSPESRVSSSPMSTSPPASRPLLPSRAVGMVVDIAPPA
KRGAGAEKTGRSSASAKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQ
NIQYKKCLKMENCTIMRINRNRCQQCRFKKCLAVGMSKDAVRFGRIPKREKQRMLLEMQN
AMNNMMSKNDMLHDDQSPPLPIEAISSDASSSSSSSSSSASSSTSDSPSCSNPSSPRYPQ
DSESVVSMDTNSSSASSCGSDSSEDEGAVTMNGQHQDAFTFPQQRSSSQGSASPPSGTDC
GGRMEEQQDTSSCWNDNPAVGGYQRCPYSNSAYREERAAYQQQLECNPSEENHRQEERCT
QNAFSYNGPNSCMKSRAYLVCPMNTSPYVDPNKPSQEIWEEFSLSFTPAVREVVEFAKRI
PGFRDLSEHDQVSLLKAGTFEVLMVRFASLFNMAERTVTFLSGKRYSLDTLRSLGAGELL
NSMCEFSEKLAALRLNEDEMSLFTAVVLVSADRSGIQDLNSVEALQDKLIWALRNLVMQN
HSDESATTFTKLLLKLPELRSLNNMHSEELLSFKVHP
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggacatcggaacagccaaacctggaggagtgatagcttacatctcatccagt
atgggctcttcaccagagtcccgtgtgagcagcagccccatgtcgacgtccccgcctgct
tcccggcccttgttgccgagccgggccgtcggcatggtggtggacatcgctccaccggca
aaacgcggtgctggtgcggagaagaccggccgctcctctgcgtctgcaaaaagcagcata
acgaaaatcaacggcatggtgctgctgtgcaaggtctgcggcgacgtggcgtcgggtttc
cactacggcgtccacgcctgcgaaggctgcaaaggcttcttcaggcgaagcattcagcag
aacatccagtataagaagtgtctgaagatggagaactgcaccatcatgcggatcaacaga
aaccgctgtcaacagtgccgcttcaagaagtgcttggctgtcggcatgtccaaagatgct
gttagatttgggcgcatccctaaaagagagaagcagaggatgctgctggagatgcagaac
gccatgaacaacatgatgagcaagaacgacatgctgcacgacgaccaaagcccgccgctg
cccatagaggcaatcagcagcgacgccagctcctcttcatcatcctcttcttcctccgcc
tcctcttctacttccgactctccatcgtgttccaacccgtcttccccgcgatacccccag
gactcggagtctgtggtttccatggacaccaactccagctccgcatcttcctgcgggtca
gacagcagcgaggatgagggtgccgtaacgatgaacgggcagcaccaagacgccttcacg
tttccccagcagaggtcatcgtcgcagggcagcgcctcgccgccgtccggtacggattgc
ggcggccgcatggaggagcagcaggacacctccagctgctggaacgataatccggctgtg
ggaggataccagcgctgtccgtactccaactctgcctacagggaggagagagcggcatac
cagcagcagcttgaatgcaatccatccgaggaaaaccacaggcaggaagaacgttgcacc
cagaatgcctttagctacaacggaccaaacagctgcatgaaaagtcgagcatacctggtt
tgcccgatgaacacctctccgtacgtagaccccaacaagccgagccaggagatctgggag
gagttttccctgagcttcactcctgctgtgagggaggtcgtggagttcgccaagaggatc
ccgggtttccgtgacctctccgagcacgaccaagtgagcctgctgaaggctggaacattt
gaggtgctgatggtccgcttcgcttccctgttcaacatggccgaacggacggtcaccttt
ctgagcggcaaacgctacagcctcgacacgctgaggtcactgggcgccggcgagctgctc
aactcaatgtgcgagttcagcgagaagctagcggctctgcggctaaatgaggacgaaatg
agcctcttcaccgctgtggtgctcgtctcagccgatcgatcggggatccaggacctgaac
tctgtggaggccctgcaggacaaactgatctgggcgctgaggaacctggtgatgcagaac
cacagcgacgagtccgccaccaccttcaccaagctcctgctaaagcttcccgagctgcgt
tcgctcaacaacatgcactctgaggaactgctgtcgttcaaagtgcatccatga
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