Gambusia affinis (western mosquitofish): 122831309
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Entry
122831309 CDS
T07758
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122831309 (cdh17)
Cell adhesion molecules [BR:
gaf04515
]
Cadherins
Major cadherins
122831309 (cdh17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Big_13
Fibulin_C
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
122831309
NCBI-ProteinID:
XP_043973337
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All DBs
Position
LG05:complement(16604535..16617911)
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AA seq
867 aa
AA seq
DB search
MTPMVHLLLLPFLLSIAAGMDLEELKGPFVDISLDVNEATAVPHPVHQFQVPAGVTGFKM
SGEGLDIFKMSSDGWLYLEKPLDWSEDTHYVFIVEAVGDEDAVADTITVTVNVLDVNNNA
PRFNQEVYTAVIRERRKPDVPFVQVSATDKDDPTTPNARLRYSLISQVPNNNNIFLFQID
PETGEISTTEEGEEMLKAKPGIQFSRGEERSINSLERKFDDYCPGQKIPYEQNPFFSCVA
TQEMKRRNLDPVEDPDYILFVRVQDLDGATATGLSATAKVYIIVQPNLWVNPGPLTIEEN
LKGDYPRVVAKVQSNDPDAGYSLVQKERELRFPFQIKENGEILLTEELDREQKDMYILVV
FAKDSNDIEVDPPMEIQVLVKDVNDNEPVCENEETEMEIQENEPFGSEVGQLVAHDIDQP
GTINSLLTYTIVSEGPSSSQSSFYIDQSNGRIQALRLLQRKEQNIYNLDIKVSDSELSTI
CKVIIKVIGVNNEEPEFEKNYYGNHSLAEDAEVGSTVLTIKATDTDEPDTGSSYIMFDIS
KGNDGDVFTVETDGKGVGYVVVAKPLDFESRSTFDLQIDARNTEPLRKGVEYTSKSTATL
TVNVNDVDEAPEFMMDSMDVVVPENFTKGSVLLKINAKDPEGSEISFKLDGDDKGWLEIN
PATGEIKTKTKMDRETLETFDVTVTAFEKNNPDRSSERAVHVRLLDVNDNVPKLTKNNDF
ICMQNIKPLIIEANDGDADPFSAPFDFAFTKKSPNWKLTKRDDSSAQLQLTKKPLKEGTY
SLQITVKDRAGMGIPNLFEVKICNCTAFGYCYTPPHGKSFKPPMGLTIGILVGVLGFCAI
VFIIVVKRSSRNKNDNQPEDGERKPMM
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatggtgcatctgttgttgctcccattcctgctcagcattgctgcagggatg
gacctggaggagctgaagggcccgtttgtggacatttcattagatgtgaacgaggcaacg
gcagtgccccatccggtgcatcagtttcaggtccctgcaggtgttactggtttcaagatg
agcggagaaggcttggacatctttaaaatgtccagtgacggctggctttacctggagaaa
cctctggactggtctgaggacacccactacgtgttcatcgtggaggcagtgggagatgag
gatgcagtggctgacacaataactgtgaccgtaaacgttttggacgtaaacaacaacgct
ccacggttcaatcaggaggtctacacagctgttattcgggagaggaggaaaccagatgtc
cccttcgtccaagtgtctgcaaccgacaaggacgaccccacgactccaaacgctcgcctg
cgctacagcctgatcagccaggtccccaacaacaacaacatcttcctgttccagatcgac
cccgaaaccggagagatctccaccactgaagagggagaagaaatgctgaaggccaaacca
ggaatccagttttccaggggagaagagcggagcatcaactccctggaacgaaagtttgac
gactactgtccaggacagaagatcccatatgaacaaaatccattcttcagctgcgtagcg
acacaagagatgaagaggcgtaacttggaccctgtggaggatcctgactacatcctgttc
gtccgcgttcaagatctggacggagccacagcgacgggtctgagtgcaactgccaaagtt
tacattattgttcagcccaacctgtgggtcaaccctgggccgttaactattgaggagaac
ctaaaaggagattatcctcgtgttgttgctaaggtccagtctaatgaccctgatgcgggc
tactcgttagtgcagaaggagcgagagctccggttccctttccagattaaagaaaatgga
gaaatacttctgacagaggagctggacagagagcagaaagacatgtacattttagttgta
tttgcaaaagactccaatgacattgaggtggacccacccatggagattcaggttctggtg
aaggacgtgaatgacaatgagcctgtgtgtgaaaatgaggaaactgaaatggagatccag
gagaatgagccatttggcagcgaagtgggacagcttgtggcccatgacatcgaccaacca
ggaactataaattctttacttacttacaccatcgtctctgaaggtccatccagctcacaa
agcagcttctatattgaccaaagcaatggaagaatccaggcgttgcgcttgcttcaacgt
aaagaacagaatatttacaacttagacatcaaagtcagcgactcagaattgagcaccatc
tgcaaggtgatcatcaaggttatcggcgtgaacaacgaggagcccgagtttgagaagaac
tactacgggaaccacagtctggcggaggacgctgaggtgggcagcacggtgctgaccatc
aaagccacagacacagacgagcccgacactggcagctcctacatcatgttcgacatctcc
aaaggaaacgacggagacgtcttcaccgtggaaactgacggcaaaggagtcggttatgtc
gtcgttgcaaagcctctggacttcgagtcccgttccacctttgacctccagattgatgcc
cgtaacacagagccgctgaggaagggtgtggagtacaccagcaaatccaccgccaccctg
accgtgaacgtcaacgatgtggatgaggccccagagttcatgatggactccatggatgtc
gtcgtaccagaaaacttcacaaagggatcagtgctgttgaaaataaacgcaaaagaccca
gaagggtcagagatcagctttaagctggacggcgatgataagggctggctggagatcaat
cctgccactggagagatcaagaccaaaaccaagatggacagagagacactggagaccttt
gatgtcactgtcacggccttcgagaagaacaatcctgaccgttcctccgagcgcgccgtc
cacgtccggctgctggatgtcaacgacaacgttcccaaactaacaaagaacaatgacttc
atctgcatgcagaacatcaaacccctcatcatcgaggccaacgacggtgatgccgacccc
ttctctgctccttttgatttcgcctttacaaagaaatcccccaactggaagttgacgaag
cgtgatgattcctccgctcagctgcagttgaccaaaaaaccgctgaaggagggaacgtac
tctcttcagatcaccgttaaagacagagcagggatgggcatcccaaacctgtttgaggtg
aaaatatgcaactgtacagccttcggctactgctacaccccaccacacggaaagagcttc
aaacctccgatgggactcaccatcgggatcttagtcggcgttctgggattttgtgctatc
gtcttcatcatagtggtaaagcgctcaagtagaaacaagaacgacaatcaaccagaggac
ggggagcggaaacccatgatgtag
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