Gambusia affinis (western mosquitofish): 122831414
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Entry
122831414 CDS
T07758
Symbol
rxrbb
Name
(RefSeq) retinoic acid receptor RXR-beta-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03320
PPAR signaling pathway
gaf04148
Efferocytosis
gaf04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122831414 (rxrbb)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
122831414 (rxrbb)
03320 PPAR signaling pathway
122831414 (rxrbb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122831414 (rxrbb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gaf03310
]
122831414 (rxrbb)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
122831414 (rxrbb)
Nuclear receptors [BR:
gaf03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
122831414 (rxrbb)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
122831414
NCBI-ProteinID:
XP_043973507
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Position
LG05:14528423..14540527
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AA seq
444 aa
AA seq
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MSAPQPNSSASNSPTNFIGSPFSVISPSLSSPVVSPSLGFGPISSSQISSSAPISGMHSV
SSSEDIKPPFGLRPMQAHSPGIMMSQKRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVNPIKWKNKDGKDEGWMTVQE
ERQRNREREGELEFSSGVNDEMPVEKILEAEMAVDLRVDLHSDRGSAGNSPHDAVSNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIPLKDGALLASEL
QRDSAQMAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNP
DAKGLSSTSEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacctcaacctaacagctcagcctccaacagcccaaccaacttcataggttct
cctttttcagtgataagtccttctctcagctctccggtggtatctccctctctgggattt
ggacctatcagcagcagtcagatttcgtcttcagcaccaatatcagggatgcattcagtc
agcagctcagaagatattaagcctccatttggcctgaggcccatgcaagctcacagccca
ggaataatgatgtctcagaaacgactgtgtgtgatctgtggtgaccgctcttctggcaaa
cactacggtgtgtacagctgtgaggggtgcaaaggtttctttaaacgaactgtgcgcaaa
gacctgagctacacctgcagggataacaaggagtgcctggtggacaaacgccagcgcaac
cgctgccagtactgccgctaccagaagtgcctggccatgggtatgaagagagaagcggta
aatcctataaagtggaaaaacaaggatggaaaagatgagggatggatgacggttcaggag
gagcgtcagaggaacagagagcgcgagggagagctggagttcagctccggagtgaacgat
gagatgcctgtggagaagatcttggaggcggagatggcggtggatttgcgggtggacctt
cactcagacagagggtctgcaggaaactctccccatgatgccgtttccaacatctgccag
actgctgacaagcagctgtttgctttggtggagtgggcaaagagaatccctcatttctcc
gagctgcccctggatgatcaggtcatcctcctgcgtgcagggtggaatgagctcctgatt
gcctcgttctcccatcgctccattcctctgaaggatggcgctctgctggcgtccgagctg
cagcgtgacagcgcacaaatggccggagttggtgctatttttgatagggagagtgtgcag
agtgcagaagttggtgccatatttgacagggttcttactgagcttgttaacaaaatgaga
gatatgcaaatggacaaaacagagctgggctgtctccgggcgattgtcctgtttaaccca
gatgctaaagggctctccagcacaagtgaggtggagctcctcagagaaaaagtctatgca
tcactggaagcctactgcaagcagaagtatccagagcagcagggaaggtttgctaagctc
ctccttcgacttccagcgctgagatccattggcttgaagtgcttggagcatctttttttc
ttcaaactgatcggggacacgcctatcgacaccttcctcatggaaatgcttgaagctccc
catcagttgtcttag
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