Gambusia affinis (western mosquitofish): 122831458
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Entry
122831458 CDS
T07758
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122831458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122831458
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122831458
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122831458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4
DUF5711
zf-C3HC4_2
DUF6798
Motif
Other DBs
NCBI-GeneID:
122831458
NCBI-ProteinID:
XP_043973583
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Position
LG05:complement(15366951..15369924)
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AA seq
399 aa
AA seq
DB search
MDQTPDLPHRCCLSPEATLREIQLNLLECKVCFEMFDSQQRERRPQNLSCGHVLCLECIT
ALSHPLLRKLECPFCRQLCSVDSTSYCQVLSDLQELLLSQKSSSSYPPHRSEGGFISETA
LHLLAAFGGWGTLINPTGIAVLGSVGGVVVVHDGEKRVVVFNQQGKKLHSFGEKGTGNGD
ICYPVDVAVSPTGYVIVTDAGDKSVKVFTSRGIHVVTVKDCFQLPWGVDTDCCGHILVSD
LQAGNLLRIKVNFSCGIILESQKVLANLCCPKAVAHCQKNGNTAVLEHPRGRHRSTNLKV
FTKDFHLLYQMDNFSLILQSSFRLNISDVAFSSDGDVVVSDCDQGLICSLGNLQNHPVLT
PLVGVHLIRPAGLVILNNTIITVDGGDHTVKIYSSKPGA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaccagactcctgatctcccacatcgttgctgccttagtccagaggcaaccctgagg
gaaatccagctcaacttactggagtgtaaagtctgctttgagatgtttgactcgcaacag
agggagcgcagaccacagaacctttcctgtggtcatgtactctgtctggaatgcatcaca
gctttgtcccaccctctcctgaggaagctggagtgcccgttctgtcgacagctgtgcagt
gttgacagcacctcctattgccaggttctgagtgacctgcaggagctcctcttgtcccag
aaatcctcgtcctcctatccccctcacaggtccgaaggaggatttatctcggaaacagct
ctgcatctccttgctgcgtttgggggttgggggactctcatcaaccccactggaatcgcc
gttttgggctctgtggggggagtagttgtggtgcatgatggagagaagagagtagtggtg
tttaaccaacaagggaagaagctgcacagttttggagaaaaaggaacaggcaatggggac
atctgttacccagtggatgtggcagtgagtcctactggttatgtcatagtgacagatgca
ggagataaatctgtgaaggttttcacatccagggggatacatgtagtgacggtcaaagat
tgcttccaacttccatggggcgtagacacagactgttgtgggcacatcctggtttctgac
ctccaggctggaaatctgctcagaattaaagtgaactttagttgtggcattatcctggag
agtcaaaaagtcctggccaacctttgttgtcccaaagcagtggctcattgccaaaaaaac
ggaaacacagcagtgttggagcatccaagaggaaggcaccgcagcacaaatttgaaggtg
tttacgaaagacttccaccttctttaccagatggacaacttcagcctgatcctccaatcg
tcctttaggttaaacatatcggatgtggctttcagcagtgatggagatgtggttgtgtct
gactgtgatcaggggttgatttgtagtctaggaaaccttcagaaccatccagtcctgact
cctcttgtcggggtccatctcattcgacctgctgggttggtaatactgaacaacacgata
atcacagtggacggcggtgaccatacggtgaagatttattctagtaaacccggtgcttga
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