Gambusia affinis (western mosquitofish): 122831612
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Entry
122831612 CDS
T07758
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122831612 (cicb)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122831612 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
DUF3915
Motif
Other DBs
NCBI-GeneID:
122831612
NCBI-ProteinID:
XP_043973854
LinkDB
All DBs
Position
LG05:complement(28239031..28286334)
Genome browser
AA seq
2735 aa
AA seq
DB search
MGPLKTNRRRSPPLTRGRGGKKRVGSHPVKEKDSKRVKKETLVRTTQHTPSTPSKRKYTP
APTEANSDDEPITNSNTTTKQETTEQMKPVVSDTSDGKKPEEKTEKEKTVGTNGNSSPPT
DSVVLPTSAPAPLGIAAPPQATNHSPSLASVSSRKTATFKARVPKKKYMYEHFANNASVT
NNIPIPSPALISNSYGSINSKNSESVNTLNNIFKHNNKIPNSINKGTNVSINSSTSSITT
SGITSMTGSSNSCPGSHSTYINSINSKSNNCSGNQPSVLTVDSKATEANHFVSVKDKTLR
TSHSKEKDSLTGENELEGAPNSTRSSSTDTASEHSSDLDVMEATGPNANIHILAPFQNSQ
PKEVSLSEGLAEALAKGMKNQRVLAHQQKRKMESDMKTANGTDSCLQSPVFRPGVVRRVS
GGSVEVQLQGEETLVKYPFCGGTMVTPSIEAESAVHFILDAPPPGISPVAVGTRVCVPFG
EEERSPLLYREGVVVQVDPHPGVSFPYQVLLNEDRETLGEKLVGEKEKGKVTGRVVWVSR
QSLRLLIPPWEVSQLDGGKAKERELEREREERERREEMEVEREVCQLSIGMGVLGGGARL
GPAFSHEGSAGVHTSGSVHSPASSSTVSSSVVTITSHGCESNLSGRERQKQPNTPEEDVE
VSHFNMGHSIGPKANTGTSQYRNIVSKPSSYVPTSTHLSLVRGVGPPHLSTITNPLPTPS
PALLTHEISNTTPNLPLTKTTPTQTPTPTSGVGSSPGSSRSRTPLSLAQQKYKKGDVVCT
PNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMKTKEMEAAGGEKGGGGSSSGTV
TPSDLRGRTSSEFEWDETSRESSETSSRGDSRPRLVLPSLLPHELSSRFDLDECEAATML
VSLGSSRSGTPSFSPISNQSPFSPAPSPSPSPLFGFRPATFSPITASPVLQHRRHRQPSG
TGGGGGGGSKPTTLTGAGERERHVSGVQTSFHSNLTFTVPMSPSKRKSDAPPPPPLPSHH
HDYTPKTELELGDLSNSFRVLSPQTPASHSRTHTPTLSQFKGLNTPSSSRPPSSAAASPP
PLLVSATPPSPLSTDGGPRRVVPIPQQTLRDSPVIVRNPEVPLVRFTESPLERGGGRNEA
AIDNTPPKDIALTPLPPQPVTGLQVPVPINAAAATVPNGTVFLRSPAQTLVLVSPTSSSL
PSTDPTATPLQALSVAVSTTVTASALSNTDSSGEQEDNKCTGFGGEVQQPVPCHPSPTAL
LPLILPAESLHPAPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDAPSHPSE
GQHPVNHPQATSLKTDCQGVAALSQEPAEALPTVEKSPPARPPPSSDEPLPEKEKGDVER
ERPDSETESDVDDPFLPGVVPEQPLSTSPVKRRTQSLSALPKDGDKSSPGKREKDHIRRP
MNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGAMEKKKYHDLAFQVKEAHFKA
HPDWKWCNKDRKKSSSEGRGVPGNKDIRERSMSESTEPHSVELKGVGPGLVGVSERSAGE
GHVGQLTRPRAFSQSAMHSLERGDRGNTQALAELAQMCVDSGGQFTSHAPAPSRAQRGVS
EDMTSDEERMVICEEEGDDDVIEDPYPSSSIDLKCKERVTDSDSENGSGDEGDRKRVFAP
VICSTASSSSSHHIPHGRSVSLSSFPSTRRYDEGRSGVVGFSDHRRKERSDGESKDTLVS
EGGSSMQASSLSISSAQPVKSTSPAGGPPSSSVGSLGVSQALGVGAVRVASTVVTNVMRP
VISTPLPIASKPRDGGPSSSPHPPERKSLTPQQQPQILIGPGGGVGPPAGGGGCYTSSSP
NPVGAGGVVTNLVLGGALPAQSAVQLITPSPHPQPSHQQPLPCTAVSASHSQTNGPLPLL
QPQFLPGSPAAPPGGKAITQVQYILPTLPANTNPKSPPQNLSQPTSIFNLPTVPQTHVSL
ANGKQQGPGLQTGYAPSPAVGVVNPGARVQTQSPVLQGKMFVPMTTVRTAQAPAQQIPIV
TPPLPVQNGAQSGSKIIHLASMPVVQSQQPQGGAVHHASPFPVTVGAAVVAPGSAPSQAV
LLPPAPTRITYVQSTPGVPSSLPLVSTTTGSSPTQQALPVPGSAYVPSPLATLGFTAIAP
PGQTLVQPLIAGQAPLLATAQSPQPSTSAPASGSGGHIVTAIYPPSPSVTMATGVVSMAP
VPPSVVYSNPSSASPHILPKHTTAPSAVMQLHLPPHPDRQADRHLPPDRSAERQSDRQVD
ILAHSDRQVERQNMSSNSNSSAAPPGGSAASIRPSSPPLQIQAPGSTPKLPHLPVRLPQK
VKATVATIPVGSYDGGGRGKDRERDKEREKEREREREREKEKEREREAAAANSHFSFEPE
PSGHTGSPAAHPSDEPPSSDTPLEGSSTADASDPRNRESITTKEGGWKETLPSSPLPPPS
ATEPALPPPQTDKDGPTPKKIKARPPPLKKTFDSVDKTGRVLSEVYFEERFAELPEFRPE
EVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSAPDEQASPKRKSRRRSSCSSEPNTPK
SAAKCEGDIFTFDRAATDGEDILAELEFEKVPYSSLRRTLDQRRALVMQLFQEQGFFPSA
QATAAFQTRYSDIFPSKVCLQLKIREVRQKIMQTATPSDASILGPSESAASAPGPSGSQA
GEGAGKGGGDLHDEEVEQGADVSPEELRELQDSSR
NT seq
8208 nt
NT seq
+upstream
nt +downstream
nt
atgggaccattgaagacaaatagaagacgatctccaccattaacaagaggcagaggagga
aaaaaacgagttggttctcatcccgtaaaagagaaagactccaaaagagtcaagaaggag
acgcttgtcagaactacacagcacacacccagcactccttccaaacgcaaatacacccca
gcgcccacagaagccaactcagatgacgaaccgatcacaaacagcaatactaccactaag
caggagactaccgagcaaatgaaacctgtggtgtcagacacaagtgatggaaagaagcca
gaagaaaagactgaaaaggaaaaaacagtggggacaaatggaaacagttctccacccact
gattctgtagtattgcctacctctgccccagctccacttggcatagctgcacccccgcaa
gccaccaatcacagtcctagtttggcctcagtttccagtaggaagacggccacattcaaa
gcgcgcgtacccaagaaaaaatacatgtatgagcactttgctaacaatgcaagtgtcaca
aataatattcctatccccagccctgccctcatatctaacagttatggcagtatcaacagt
aaaaacagtgaaagtgtgaatactctcaataatatttttaagcataataacaagattcct
aacagcattaataaaggcactaatgtgagcataaatagcagtacttccagtatcactaca
agtggtattaccagtatgactggcagtagtaacagttgtcctggaagccatagtacttat
ataaatagcattaatagcaaaagtaataattgctcaggtaatcagccatcagtattaaca
gtagacagtaaagctacagaagcaaaccattttgtctcagtgaaggataaaaccctcagg
acatcacattccaaggaaaaagactcactaactggggaaaatgaattggagggtgcccct
aactcgacacgctcttcctctaccgatacagctagtgagcattcttctgacctggatgtg
atggaggcaacaggaccaaatgctaatatccacatccttgctcctttccaaaactcacag
cctaaagaggtcagtctttcagagggactagctgaagctttggctaaaggcatgaaaaac
cagagagttctggctcaccaacaaaaaagaaaaatggagagtgacatgaagactgccaac
ggtacagattcctgcctccaatctcctgtgtttagaccaggggtggtgcgcagggtaagt
ggaggtagtgttgaagttcagctccaaggagaagaaacccttgttaaataccccttttgt
ggtgggactatggtgacaccctctatagaggctgagagtgctgtccacttcatcttagat
gcacccccacctggcatttcccccgtagctgttgggactcgagtgtgtgtcccatttggt
gaggaggaaaggagtcctctgttgtacagagagggggttgttgttcaggtggacccccac
cctggtgtctcgtttccttaccaggtactcctaaatgaagacagagaaactctgggtgaa
aagttggtgggggagaaagagaaaggcaaagtaacgggtcgggttgtctgggtgtcccga
cagagcctgagactactcatccctccgtgggaggtctcccagttagacggtgggaaagca
aaggagagagagcttgagagggaaagggaggagagggaacgccgggaggagatggaggta
gagagagaagtctgccagttaagtatcggcatgggggtcctgggaggtggagcacggctg
ggccctgcattttcacatgaggggtctgcaggagtacacacttctggatctgtgcattca
cctgccagttcctccactgtaagctccagtgtagtgaccatcacaagtcatggatgtgaa
agcaacttgtcgggcagagaaagacagaaacaacctaacacaccagaggaagatgttgag
gtatctcattttaacatgggtcattccattggtccaaaagcaaatactggaacctcccag
tacagaaacattgtctccaagccgagtagttacgttcctacatccactcacctctcattg
gtgaggggtgtaggaccacctcatctctctacaataactaatcctctgccaaccccatcc
cctgctttactaacccatgaaataagcaacaccactccaaacctacctctaaccaagacc
actcccacccagacccctactcccacttctggtgtgggctcctctcctggctcctctcgt
tctaggactcctctctcgctggctcagcagaaatataaaaaaggagacgtggtgtgcact
cccaatggcatccgtaagaagttcaatgggaagcagtggaggaggttgtgctctagggag
ggctgtatgaaggagtctcagcgtcgaggatactgctctagacacttgtccatgaaaacc
aaagaaatggaggcagcagggggggagaaaggagggggaggcagcagttcagggacggtg
accccttcagaccttcgggggagaacaagcagtgagtttgagtgggacgagacctcaaga
gagagcagcgagaccagcagcagaggagactccagacctcgcttggtccttccttccctc
ctccctcatgaactgtcatcaaggtttgatttagatgagtgcgaggctgccaccatgctt
gtgtcgttaggtagctcccgctcaggcactccatccttctcccctatctccaatcagtct
cccttttcccctgccccctctccctcaccctctccactgtttggtttcaggccggctacc
ttctcccctattactgcatccccagtcttacaacaccggcgacaccggcagcccagtggt
acagggggtggagggggagggggcagtaaaccaacaaccctaacaggagcaggtgaaagg
gagagacatgtttcgggtgtccagacctccttccacagtaacctgacgtttacggtcccc
atgagccccagcaagagaaaatcagatgcaccccctccaccacctcttccctcacaccac
cacgattatacacccaaaacagagctggaactgggggacctcagcaactctttcagggtg
ctttcaccccaaacaccagcatcacattcccgcacacatacacccaccctctcccagttt
aaaggactgaacacaccttcttccagcaggcccccatcctctgctgctgcctctcctcct
cctctgctcgtgtccgcaacccctccctctcccctctccactgacggagggcctcggcga
gtggtccctataccccagcaaactttgcgggactcccctgtcattgttcgaaatcctgaa
gtccctctagtgaggttcacagagtctcccttggaaagaggaggaggaagaaacgaggca
gctatagataacactccacctaaagacattgctttaaccccccttcctcctcaacctgtc
acgggcctccaggttcccgtcccaattaatgctgctgcagcaacagtacccaacggtact
gtcttcttgcggagcccagcccaaactctagtacttgtttccccaacatcttcctctcta
ccttccactgaccctactgccacccccctccaagccctctcggttgctgtaagcacaaca
gtgacagcttcagctctgagtaacacggacagctccggagaacaagaagacaacaagtgt
accgggtttggtggagaggtccagcagccggttccctgtcacccctctcccacagctctg
ctccctctgatcctaccagcggaaagtttgcaccctgcccctcgaaaggacatcatcatg
ggacgtcctggcacagtgtggaccaatgtagaaccgcggtcagttccagtcttcccttgg
cattcattggttcctttcctggcacccacccagtcagatgctccatctcatcctagtgag
ggtcagcaccctgttaaccaccctcaagcaaccagtcttaagacagattgtcagggggtg
gcagcgctgtcacaggagcctgcagaggcacttcccactgtagagaaaagtcccccagcc
aggcctcccccttcgtctgatgagcctcttccagagaaggagaagggagatgtggagagg
gaaagacctgacagcgaaaccgagagtgatgtagatgatcccttcctcccaggagttgta
ccagagcagcctctctccacctccccagtaaagcgacgtactcagtctctcagtgcgctg
cccaaagatggagacaagagcagtccaggaaagagggagaaggatcacatccggcgacca
atgaatgcatttatgattttcagtaagcgtcatcgagcgttggtgcaccaacggcaccca
aaccaggacaacaggacagtcagcaagattcttggagagtggtggtatgccctgggagct
atggagaaaaaaaagtaccatgacttggccttccaggtgaaagaggcccactttaaagca
cacccagactggaagtggtgcaacaaagacaggaagaagtccagctctgaaggtcgcggt
gtcccaggaaacaaggatatcagagaaagaagcatgtctgaatcaacagagccccattct
gtggagctcaagggtgtgggtccaggtctggtgggtgtatcagagaggagcgcaggagag
gggcatgtgggtcagcttacccggcccagagccttttcccagagtgccatgcacagcctg
gagaggggagacagagggaacactcaagctctggcagagctggcccagatgtgtgtggac
agcggtggccagtttaccagccatgctcctgcaccctctcgggcacaacggggggtcagt
gaggatatgaccagtgatgaagagcgtatggtcatctgtgaagaggaaggagacgatgat
gtcattgaggacccttatcccagcagctccatagacctaaagtgtaaggagcgtgtgacc
gacagcgatagtgagaacggttcaggagatgaaggggatcggaagagagtatttgcgccc
gtcatctgttccactgcatcatcgtcttcctcacaccatatccctcatggcaggagtgtc
tcactgtcctcttttcccagcaccagacgttatgatgagggcagatctggagtggtaggg
ttttcagaccacagaagaaaggaaagaagtgatggagagagtaaagacactttagtgagc
gagggaggcagcagtatgcaggcctcttctctctccatctcttctgctcaaccagtcaaa
tcaacttctccagctggagggcctccatcctcatcagtaggttccctaggagtgagccaa
gctctgggcgttggcgctgtgagggttgcatctaccgtagtgacgaacgtgatgcgtccg
gtcatcagcacacctcttccaatcgccagcaaacccagagatggcggcccgtcgtcaagc
ccgcatcctccagagaggaagtccctcactccccagcagcagcctcaaattctgattggt
ccaggaggaggagttgggcctccagccggagggggtgggtgctacacttcatcatcacca
aaccctgtaggtgcgggtggtgttgtgactaacttagtgttaggaggggctctgcctgct
cagtctgctgtccagctcatcaccccctcccctcaccctcagccgtctcatcagcagcct
cttccctgtacagccgtctctgcgtcacacagccaaaccaacggccccctacccctcctc
cagccccagttcctccctggctcccccgcagcaccccccgggggtaaggccatcacacag
gttcagtacatcctgcccaccctccctgccaacaccaaccccaagagcccaccgcagaat
ctcagccagccaaccagtatcttcaacctacccacagttccacaaacacatgtgtccctg
gccaatgggaaacagcaggggcccggtctgcagacaggatacgctcccagccctgcagtg
ggcgtggtcaaccctggagcaagagtgcaaacccagtctccggtgctccagggtaaaatg
tttgttcccatgacaacagttcggactgcgcaagcccctgcccagcagattcccattgtc
actccaccccttcccgtccagaatggtgcacagtccggaagcaagattattcatcttgcc
tcgatgccggtggtccagtcccagcagcctcagggtggagcagtgcatcatgccagcccc
ttcccagtaacagtgggagcagcagtggtggcaccaggatctgccccctcccaggcggtg
ctgctgccgcctgcacctacaagaattacctatgtccagtccaccccgggggtcccatcc
tctctgcctctagtctccacaacaacaggctcctcacccacccagcaggctctaccagtg
cctggatctgcttatgttccctcacctttagcaacccttgggtttacagccattgcacca
cctggacagacactggttcagccactgattgcaggtcaggcccctctgcttgccacagct
cagtccccacaaccctccacctctgcccctgcctcaggttccgggggccatatagtcacc
gccatttaccctccatcaccaagcgtcaccatggcaacaggggtggtctctatggcacca
gtgccccccagcgtggtctactctaacccttcgagcgcttctccccacatcctgccgaaa
cacacgactgccccctctgccgtcatgcagctccatctgccgccccacccggaccggcaa
gcggacaggcacctgcccccagaccgatccgccgagcgtcagagcgacaggcaggtggac
atcctggcacattcagacagacaggtggagaggcagaacatgagctccaacagtaacagc
tcggcggcaccccctggtggctcagctgcgtccataaggcccagcagtcctccacttcag
atccaagcacctggcagtacacccaagttaccacatcttccagtcaggctcccccagaaa
gtaaaagcaacggtggcgaccattcctgttggcagctatgacggaggaggccgagggaaa
gacagagaacgagacaaagagagggagaaggaaagagagagagaacgagaacgagagaag
gagaaggagagggagagagaagcagcagcagccaatagtcatttctcctttgagcccgag
ccttcagggcacacggggtctccggcagcacatcccagtgatgagccgccgtcctccgac
acaccactggagggttccagcaccgcggacgcctctgacccaaggaacagggaaagcata
acaaccaaagagggtgggtggaaggagaccctcccctcctctcctctcccccctccgtca
gccacagaacccgctttgcctcctccacagacagacaaagacggacctacacccaaaaag
atcaaagcccgcccaccaccactaaagaaaaccttcgactctgtcgataagactggcagg
gttctctcagaggtatatttcgaggagcggtttgccgagctgccggagtttcgacccgag
gaggttttgccgtcacccaccctacagagtctggccacgtcacctcgcgccatcctgggc
agctatcgtcgcaagaggaagaactcaacagatttggattctgcacctgatgagcaagcc
tctccaaagaggaagagtcggcggcgttccagctgcagctctgaacccaacacacctaaa
agtgctgccaaatgtgaaggagacatcttcaccttcgacagagcagccacagatggagag
gacattctggcagaactggagtttgaaaaggtgccgtattcgtccctgcgacgaactctt
gaccagaggagggcactggtcatgcagctgttccaggagcagggcttctttccgtcagct
caggccactgcagcattccagacaagatactcggacattttcccctccaaggtttgtctg
cagctgaagatcagggaggttcggcagaagatcatgcagacagcgacaccctctgatgcc
tccattttaggcccgtcagagtccgctgcatcggctccaggaccatccggctcccaggcg
ggggagggggctggcaaaggaggtggagacctgcatgatgaggaagtggaacagggagca
gacgtgagtccagaggagcttcgtgagttacaggactcttctagatga
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integrated database retrieval system
