Gambusia affinis (western mosquitofish): 122831669
Help
Entry
122831669 CDS
T07758
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122831669
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122831669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
RuvA_C
Motif
Other DBs
NCBI-GeneID:
122831669
NCBI-ProteinID:
XP_043973976
LinkDB
All DBs
Position
LG05:complement(25110035..25117861)
Genome browser
AA seq
624 aa
AA seq
DB search
MDPVLPSDTFDSDLLETESEELRLKVDFFRKLGYSTAEVKAALRKLGLSTDTNAMLEELV
RNRTTNTSPCFSDSDERSADLKDLLLPPSWVVGTCRIMPQHGEQKSADLELRPIVIDGSN
VAMSHGNKEVFSCRGIKLAVDFFLDRGHNNITVFVPSWRKELPRADAPITDQHILLELEK
RKIVAFTPSRWVGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQGEKLEWKKCIEERL
LMYSFVNDKFMPPDDPLGRHGPNLDNFLRKKPLPVEQKKLPCPYDKKCTYGIKCKYYHPE
RANHSYLSLADELREKAQISFVKEEKKARSPVNHPQSEPEPSHPRHTHLPWDQQVSSVPG
HISENKLMLWENFRKSPNQMLSSANGGKCQEEYPASHYIPNHYPNMSREYFDSGFDSTES
YYSDFPPSLSSTHRLGSQHQSTLPGLQRSPVHMENCNTSHCGKCCSYPHQQHHSNIDCCS
QPIYDTYNPNMFPHSVHQQRSLPAHFHSTATTQLHQNYWSDPFQGVPPARSSCPAPSLVY
PSRCHSSCCSYENHQYQTWGQQQQPPLPPAPAAFKQKRSEMRKKLHAIFNPNQVDRVMEM
FPHLIDAEVLAAEILNMKAQGMIF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacccggtacttcccagtgatacttttgactcagatctgctggagacagaaagtgag
gaactccggcttaaagtggacttcttcagaaaactggggtactccacagcagaggtgaaa
gccgctctgagaaagctgggcctaagcacagacaccaacgcaatgctcgaggagcttgtg
agaaacagaaccaccaacacatcaccctgtttttccgacagcgatgagaggagcgcagat
ctgaaagacctgctgctgcctcccagttgggtcgttggaacctgcagaatcatgccacaa
cacggggagcaaaaaagtgcagatttagagctgagacctattgttattgacggcagcaat
gttgctatgagtcacggcaacaaggaagttttttcatgcaggggcataaagttggcagtg
gatttcttcctggacagaggtcataataacatcacagtgtttgttccctcttggcgcaaa
gaattgccccgagctgatgcccctataacagatcaacatattctgttggagcttgaaaaa
cgaaaaatagtggccttcaccccttcccggtgggttggtggcaagagagtggtttgttat
gatgaccgcttcattgtcaaactggcgcatgatttagatggcataattgtgtccaacgac
acctaccgtgatcttcaaggagaaaaacttgagtggaagaaatgcattgaggagaggctc
cttatgtactcatttgtgaatgacaagttcatgcctccagatgatcctttaggtcgacat
ggacctaacctcgacaactttctccggaaaaagcccctgcctgttgagcagaaaaaactg
ccctgtccatatgataaaaagtgcacttatggcattaagtgcaagtactaccatcctgag
cgggcaaaccactcctatctgtccttggctgatgaactgagagagaaagcccaaatttct
tttgtaaaagaggaaaaaaaggcaagatcacctgtcaaccatcctcaatctgaacctgag
ccttctcatcctcgtcacacacatctcccttgggatcagcaagtttcctcagttcctggt
cacattagtgaaaacaaactaatgctctgggaaaacttcagaaaaagccccaaccaaatg
ctgtcttcagcaaatggaggaaagtgtcaagaagaatatcctgcatcacactacataccg
aatcactatcccaatatgtctcgggaatattttgattccggttttgattcgactgagagc
tactactccgactttccaccatccctcagcagcacccacagacttggttctcagcatcaa
agcaccctccccgggctccaacgttccccagttcacatggagaactgtaataccagtcat
tgtggcaaatgctgttcctatcctcatcagcagcatcacagcaacatcgactgctgcagt
caacccatctatgacacctacaatccaaatatgttcccacacagtgtacatcagcaacgg
agcctgcctgcccatttccatagcactgcaaccacccaactccatcagaattactggtca
gatccctttcagggtgtgccgccagccagatcctcatgccccgccccctccttggtctat
ccttcacgctgccacagctcctgttgctcctatgagaatcaccaataccaaacctggggc
cagcagcaacaaccgccgctgcctccggctcctgctgcattcaagcaaaaaaggtcagaa
atgcgcaagaaactgcatgccatcttcaacccaaaccaagtggatagggtcatggagatg
ttcccacacctgatagatgctgaagttttggctgcagagatactgaacatgaaagctcag
gggatgatattctga
DBGET
integrated database retrieval system