KEGG   Gambusia affinis (western mosquitofish): 122831669
Entry
122831669         CDS       T07758                                 
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gaf03019]
    122831669
Messenger RNA biogenesis [BR:gaf03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     122831669
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 RuvA_C
Other DBs
NCBI-GeneID: 122831669
NCBI-ProteinID: XP_043973976
LinkDB
Position
LG05:complement(25110035..25117861)
AA seq 624 aa
MDPVLPSDTFDSDLLETESEELRLKVDFFRKLGYSTAEVKAALRKLGLSTDTNAMLEELV
RNRTTNTSPCFSDSDERSADLKDLLLPPSWVVGTCRIMPQHGEQKSADLELRPIVIDGSN
VAMSHGNKEVFSCRGIKLAVDFFLDRGHNNITVFVPSWRKELPRADAPITDQHILLELEK
RKIVAFTPSRWVGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQGEKLEWKKCIEERL
LMYSFVNDKFMPPDDPLGRHGPNLDNFLRKKPLPVEQKKLPCPYDKKCTYGIKCKYYHPE
RANHSYLSLADELREKAQISFVKEEKKARSPVNHPQSEPEPSHPRHTHLPWDQQVSSVPG
HISENKLMLWENFRKSPNQMLSSANGGKCQEEYPASHYIPNHYPNMSREYFDSGFDSTES
YYSDFPPSLSSTHRLGSQHQSTLPGLQRSPVHMENCNTSHCGKCCSYPHQQHHSNIDCCS
QPIYDTYNPNMFPHSVHQQRSLPAHFHSTATTQLHQNYWSDPFQGVPPARSSCPAPSLVY
PSRCHSSCCSYENHQYQTWGQQQQPPLPPAPAAFKQKRSEMRKKLHAIFNPNQVDRVMEM
FPHLIDAEVLAAEILNMKAQGMIF
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggacccggtacttcccagtgatacttttgactcagatctgctggagacagaaagtgag
gaactccggcttaaagtggacttcttcagaaaactggggtactccacagcagaggtgaaa
gccgctctgagaaagctgggcctaagcacagacaccaacgcaatgctcgaggagcttgtg
agaaacagaaccaccaacacatcaccctgtttttccgacagcgatgagaggagcgcagat
ctgaaagacctgctgctgcctcccagttgggtcgttggaacctgcagaatcatgccacaa
cacggggagcaaaaaagtgcagatttagagctgagacctattgttattgacggcagcaat
gttgctatgagtcacggcaacaaggaagttttttcatgcaggggcataaagttggcagtg
gatttcttcctggacagaggtcataataacatcacagtgtttgttccctcttggcgcaaa
gaattgccccgagctgatgcccctataacagatcaacatattctgttggagcttgaaaaa
cgaaaaatagtggccttcaccccttcccggtgggttggtggcaagagagtggtttgttat
gatgaccgcttcattgtcaaactggcgcatgatttagatggcataattgtgtccaacgac
acctaccgtgatcttcaaggagaaaaacttgagtggaagaaatgcattgaggagaggctc
cttatgtactcatttgtgaatgacaagttcatgcctccagatgatcctttaggtcgacat
ggacctaacctcgacaactttctccggaaaaagcccctgcctgttgagcagaaaaaactg
ccctgtccatatgataaaaagtgcacttatggcattaagtgcaagtactaccatcctgag
cgggcaaaccactcctatctgtccttggctgatgaactgagagagaaagcccaaatttct
tttgtaaaagaggaaaaaaaggcaagatcacctgtcaaccatcctcaatctgaacctgag
ccttctcatcctcgtcacacacatctcccttgggatcagcaagtttcctcagttcctggt
cacattagtgaaaacaaactaatgctctgggaaaacttcagaaaaagccccaaccaaatg
ctgtcttcagcaaatggaggaaagtgtcaagaagaatatcctgcatcacactacataccg
aatcactatcccaatatgtctcgggaatattttgattccggttttgattcgactgagagc
tactactccgactttccaccatccctcagcagcacccacagacttggttctcagcatcaa
agcaccctccccgggctccaacgttccccagttcacatggagaactgtaataccagtcat
tgtggcaaatgctgttcctatcctcatcagcagcatcacagcaacatcgactgctgcagt
caacccatctatgacacctacaatccaaatatgttcccacacagtgtacatcagcaacgg
agcctgcctgcccatttccatagcactgcaaccacccaactccatcagaattactggtca
gatccctttcagggtgtgccgccagccagatcctcatgccccgccccctccttggtctat
ccttcacgctgccacagctcctgttgctcctatgagaatcaccaataccaaacctggggc
cagcagcaacaaccgccgctgcctccggctcctgctgcattcaagcaaaaaaggtcagaa
atgcgcaagaaactgcatgccatcttcaacccaaaccaagtggatagggtcatggagatg
ttcccacacctgatagatgctgaagttttggctgcagagatactgaacatgaaagctcag
gggatgatattctga

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