Gambusia affinis (western mosquitofish): 122831717
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Entry
122831717 CDS
T07758
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122831717
Membrane trafficking [BR:
gaf04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122831717
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
122831717
NCBI-ProteinID:
XP_043974038
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All DBs
Position
LG05:complement(31628335..31649551)
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AA seq
1489 aa
AA seq
DB search
MTDEKCPQLVDYFVVAGLDPAGPWRSLGEDGRASSSSSPSAAAVRAAEPVTDLAVIARGL
GEEVPEGFTCIEKTLGGHSAELSAGLINNPHLYLCYRRGRDKPPVLELGVLYEGKEQPKQ
GWYVMETTPYSRSASLSSGGAPTAHRVFLMYRRALDSQGLHTLGVTDIALLMPSKGEVAP
HTFCRVDKNLNTGMWGPALHVCYKRAVAKANALVFEASLISRYPEEDLEAFPLPESVPVF
CLPMGVTVESWPLNSKYQLPVFSTFVLTSASGDKVYGAAIQFYESFSRDLLSERQNVRLG
LLSVVDRRPITSRSLHTKKSICVLSHWPFFTVFQKFLTFIYRYSISGPHVLPLEKHISSF
MHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASFLKLLQNLGPENSCTLLLAV
LTEHKLLLHSLRPDVLTSVSEALVSMTFPLRWICPYIPLCPLQMADVLLAPMPFIVGVHS
SYFDLYDPPPEVVCVDLDTNTIFQSEDKKLLSWRLLPRKHGKTLFSTLTNLHQTLEKICS
PGQEEATLEFLLTDYDQIYRRQKQLELEIQEAFLRFMSCLLRGYRAFLLPITQAPSDTTT
DCSSLFNLQGFLKSRDRSQQKLYAQLSRTQMFTQFIEECSFVSDRHACLEFFDECVQKVD
VEKPEEVRLIDLDENGGGEHTVFIMPPEEPQEADGTECPAHYSYETFPRLTAELFDRPQD
PLRAPARGSAPSSPAPRRTKQEIKVAQKRAQKYSAVPDMWSKCLLGHCYGLWFIYLPTFV
RAEGSKVRALHSAHDVLRHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAG
ITPNTITYGYYNKAVLECKWPSTNQGGRLRWAKLRNVLLAVAQFRQPIKRQWKSGSVGSR
VAMLEPDQKPRPQSALIRQCSWSGLSESSSHESLTGLLVKSSSLSSMKTPTVSERKVCKK
SPILHGSGTNGDTVHRKPPLGRREASAPPAAPPGGAVVRRSEVCLSTFYTESELDCRCEP
RLSRSDRSGSSGGKNKARTVDENSNHVSSPSRGGLAGKLQQLLTPTKNRASVRRTASVEN
RRSGGGIGRKVSRKSQVAESLLKAKERLVNATSESSLSVGSDLDLTDTATAEYPVRRSWD
ANQEGAGIEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCAASFVPFLNAEI
CDPGPVSSAERCTMNLEDEVESAVRPPSGPQCNGLSDDSSSETSTYSVTSKATTVSSVGG
TPQVTVAYLSPLVLRKELESLLENEGESVLAQPQFLDSHSIIFWNLVWYFQRLGLPSNLL
QLVRSSPLVSHFTQLENSAVRVRLLWDTLSPDTDQWPPLYVLWRIHSGALMRTYSWRRHN
HPFTLSFLEEVLRWVGMNEVHKAITLFLDTLEKQPGSPQTQRSLYREMLFLTLAAMGKDH
VAAFDKKYKTAFLRLSSSLGRDELRRKRAQPPSTKAVDCRRSFHPPLEC
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgagaaatgtccccagctggtggactacttcgtggtggcgggcctggacccc
gccgggccctggaggtccctgggcgaagacggccgggcctcctcctcctcttcaccatca
gcggcggcggtccgagcggcggagccggtgacggacctggcggtgatcgctcgcggtctg
ggggaggaagtaccggaaggtttcacctgcatagagaaaaccctggggggccactcggcc
gagctgagcgccgggctcatcaacaacccacacctctacctgtgctaccgccgggggcgg
gacaaaccaccggtcctggagctgggggttctgtatgaggggaaggagcagccgaagcag
ggctggtacgtcatggagaccacaccctatagccgctcggccagcctgagctctggcggc
gcccccacagcccaccgggtcttcctcatgtaccgccgggccctggactcacagggcctg
cacacgctgggcgtcaccgacatcgccctgctgatgcccagcaagggggaggtggcaccg
cacacattctgccgggtcgacaagaacctcaacacgggcatgtggggtccagctctgcac
gtctgctacaagagagccgtggccaaagccaacgccctggtgttcgaagccagtctgatc
agccggtacccagaggaggacctggaggcgttccctcttcctgagtcggtgccggtcttc
tgtttgccgatgggcgtcactgtggagagctggccgctgaactccaagtaccagctgcct
gtcttttccaccttcgtcctcacgtctgcctccggagacaaggtatacggcgctgccatc
cagttctacgagtcgttctccagggatcttctgtccgagcggcagaacgtccggctcggc
ctgctgagcgtggtggaccgccggcccatcaccagccgcagtctgcacaccaagaagagc
atctgcgtcctgtcccactggcccttcttcaccgtcttccagaagttcctcaccttcatc
tacagatactccatctccgggccgcacgtcctgccactcgagaaacacatctccagcttc
atgcacaacgttccgttcccttcccctcagcgtccacggatcctcgttcagctctctccg
tatgacaacctgctgctctgccagccggtctcctccccactcccactcagcggtgcgagc
ttcctgaagctgctccagaacctgggtccagagaactcctgcacactgctgcttgccgtc
ctcactgaacacaagctgctgctgcactcactgcgacccgacgtcctgacctccgtcagc
gaggccctcgtctctatgaccttcccgctgcgctggatctgcccctacatccctctgtgc
ccgctgcagatggccgacgtgctgctggcgcccatgcctttcatcgtcggcgttcactcc
agctactttgatctctacgaccccccgccagaggtcgtctgcgtcgacctggacaccaat
accatcttccagtcagaggataagaagctgttgtcgtggcgattgctacccaggaagcac
ggaaagacgctgttcagcacactgaccaacctgcaccagaccctggagaagatttgcagc
cccggccaggaggaggcgaccctggagtttctgctcaccgactacgaccagatctaccgg
cggcagaagcagctggagctggagatccaggaggccttcctgcgcttcatgagctgcctg
ctgcggggttaccgcgccttcctgctgcccatcactcaggcgccgtccgacaccaccact
gactgcagctccctattcaacctgcagggtttcctgaagtctcgggaccggagccagcag
aagctgtacgcccagctgagccggacccagatgttcacccagttcatcgaggaatgctcc
ttcgtcagcgaccgccacgcctgcctcgagttcttcgacgagtgcgtccagaaggtggac
gttgagaagccggaggaggtgcggctgatcgacctggacgagaacggcggcggcgaacac
accgtcttcatcatgccgcccgaggagccgcaggaggccgacggcaccgagtgccccgcc
cactacagctacgagacgttccccaggctgacggcggagctgttcgaccgaccgcaggac
ccactgcgcgccccggccagaggcagtgcccccagcagccccgccccccgccgcaccaag
caggagatcaaggtggcccagaagcgggcccagaagtactcggcggttccggacatgtgg
tccaaatgcctgctgggtcactgctacggcctgtggttcatctacctgcccaccttcgtc
cgggccgagggctccaaggtccgcgccctgcactccgcccacgacgtcctccggcacatg
gagacccgcaaggtggtgctgcccgacgaggtgtgttaccgcatcctgatgcagctctgc
ggtcagtacggccagccggtcctcgccgtcagagtcctgctggagatgaagaaggccggg
atcacgcccaacaccatcacctatggatactacaacaaggctgtgctggagtgtaagtgg
ccctcgaccaatcagggcggccgtctccgctgggctaagctacggaacgttctattggcc
gtggctcagttcaggcagcccatcaaacggcagtggaagagtggttctgtgggctccaga
gtagccatgttggagcccgatcagaagccccgcccacagtccgctctgattcgtcagtgc
agctggagcggcctgagcgaaagctcgagtcacgagtctctgaccgggttgctggtgaag
agctccagcctgagcagcatgaagacgcccacagtcagtgagcgcaaagtctgtaagaag
tcccccatcctccacggttcagggacaaacggggacacggtccaccggaagcccccgctg
ggccggagagaagcctccgctccgcctgcagcgccccctgggggagccgtggtgcggcgc
agtgaggtctgcctttccaccttctacactgagtcggagctggactgcagatgtgaaccg
aggctcagcagatctgacagatccgggagctccggcggaaagaacaaggccaggacagta
gacgagaactccaaccacgtgtcgtccccgagccgaggaggcctggcagggaaactgcag
cagctcctcacaccgaccaaaaaccgagcatcggtccggcgcaccgccagcgtggaaaac
cgccggtccggaggagggatcggtcggaaagtgtccaggaagtctcaggtggctgaaagt
ctgctaaaggcaaaggagcggctggtgaacgccacatcagagagctcgctgtcggtagga
agtgacctggacctgacggatacggccaccgcggagtatcctgtgcgcaggtcgtgggac
gccaaccaggagggggcaggaatcgaggttctgatgtccagctgctcgctgtgccgcagc
tgcaactctctggtgtacgacgaggagatcatggcgggctggacctcggacgactccaac
ctgaactcatcctgcccgttctgcgccgcctcctttgtcccgttcctgaacgctgagatc
tgcgacccggggcctgtcagcagtgcggagcgctgcaccatgaacctggaggatgaggtg
gagagcgccgtgaggccccctagtggtccccagtgcaacgggctgagcgacgactccagc
tctgaaaccagcacctactccgtgaccagcaaggccaccacggtgtcgtcggtgggagga
actcctcaggtgacggtggcctacctgagcccgctggttctgaggaaggagctggagagt
ctgctggagaacgagggcgagtcggttctggcccagcctcagtttctggacagccactcc
atcatcttctggaacctggtctggtacttccagcggctcggtctgcccagcaacctgctg
cagctggtccgcagctcgccactggtcagccacttcactcagttggagaactctgcggtg
agggtccggctcctctgggacacgctgagccccgacaccgaccagtggccgccgctctac
gtcctttggaggatccacagtggcgccctgatgaggacctacagctggaggcggcacaac
cacccgttcaccttgtccttcctggaggaggttctgcgctgggtgggcatgaacgaggtg
cacaaggccatcacgctcttcctggacaccctggagaagcagcccgggtcgccacagacc
cagaggagtctctaccgagagatgttgttcctgacactggcagcgatgggaaaagaccac
gtcgctgcattcgataagaagtacaagacggcgttcctgcgcctcagcagctccctgggc
cgggacgagctccgcaggaagcgggcccagcctcccagcaccaaagccgtcgactgcaga
cgcagcttccacccgccgctggagtgctga
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