Gambusia affinis (western mosquitofish): 122832091
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Entry
122832091 CDS
T07758
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122832091 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gaf04091
]
122832091 (frem2b)
Lectins [BR:
gaf04091
]
C-Type lectins
Lecticans
122832091 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
DUF6522
TM_ErbB1
TMEM154
Motif
Other DBs
NCBI-GeneID:
122832091
NCBI-ProteinID:
XP_043974425
LinkDB
All DBs
Position
LG06:complement(8083340..8144361)
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AA seq
3113 aa
AA seq
DB search
MAWIIPSHLHGTGAALLLLALILTGDAVASVFDSYGLSYALRPELSEDTILVANNGIRVP
FGRSVFIDPINDLVVQVQPGDRCSITVLDNDPLSQRPGHLSPKKFPCEFGPNDVKYSHFG
SRSPPKDRVRLQLRYDTQTDTIIIPFMMEVEVIFTQLEVLTKNMPLTVDKLLGTSNPIDR
GILEFTFDRSSQQCKIASLTSGNVIPRYGKLVDEESLGTMVNCDEFIRMNIHYQHTFTSK
SPNRDYIPMLVELYDKEGNVLKQEFFQILVRIKDGEDNTPPKPSFVAMMMMEVDQFVMTA
ITVDMLAAEDVESNPDELIFNITSPLSFEEGYIVSTDDRNLPITSFYQGDLKELKIAYKP
PAVDSDTERIFQVELEVVDTEGAVSDSFEFMIVVKPMNTLAPVVTRNTGQLLYEGQSRPL
SSSQNLEISDEDNLDKVRISVIDGLRHGALTVLGSRRKFFTPADLDAGVVIYQHDGSDTY
SDNIIFRMTDGTNEVEFLFPITVVPTDDEAPIINANTGLILFKNQVMQIFPSMLSAADID
SEDSTIKFVLELPFPTVGQVLLRQSEAPKDPSTWKFNTEDEMYEKVVTEWLQQDIIDGKL
FYKHTGPHSTSTVMDQFVFRVQDDNDPPNKSGKSTFIIKIIPVDDLPPELYPSTTLQMMV
HEYQLTYFRKKFLRYTDLDSEDRDLKYTIIQPPTDTDENSPVILGALVLTETPNTEVTTF
TQAQINHHKIAYKPPDLELGITSRVLQFRYTVEDASRNSVEGVFTIFLKPVDNKPPEITN
TGFTVLERGRHILTRAELDTTDTDTDSSKITFTVTQPPLHGQVQFIFTHMTKGDTFNLEN
IVNGMISYINNGDESTVDLIKIDVSDGVHVVPISIKITVKPIDDETPTIDLPAGTIGSYI
DVLENEATEITSNVIQGRDEDTDDLRLTFIVEDKPSFGEILVKGVPSSTFTQADIINGFV
VYAHTSGEIGVNTKEDFFNLTLTDMSDEWTIGGNKITGVRVHVTILPLDSQAPEVFVGPQ
FTVTEGEKNVIQILHISADDVDTPNDDLLCTIIVQPTSGYVENISPAPGSEKSRSGTAIS
AFTIKDIRQNHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPISVIPSNDEKPEIY
MREFVVMEGMNIVIDTPILNGADADLPSDQLTFFIAKPPRHGFILNQLTTGTLPVSNFTL
EQIRDGSSIVYEHDDTETTEDSFEIVLTDGKFSVEKTVIVMVIPVDDETPRMAINDGLEI
EIGDVEVINNNVLKATDLDSEDSTLMYIIKYGPGQGYLQRTMPTGELQNISVGMNFTQNE
VDQGLILYIHNGQEGIRDLIKFDVTDGINPLIDRYFYVTIGGIDIVFPDVINKGVSLKEG
GRVTLTTDLLSTSDLNSPDEHLVFTITRAPVRGHLECTDTPGMPISSFTQLQLAGSKIYY
IHTADDEVKMDSFEFEVTDGYNPVFRTFRISITGVDNKKPVVTVHGLVVIEGENKLITPF
EITVEDRDTVDRLLRFTVTQIPVHGRLLFNNSQPVTSFTKQDLNENMISYKHDGTESTED
SFSFTVTDGTHTDFYVFPDTVFETRKPQVMKITVLAVDNGVPHIIVNKGAQTLRVMERDL
LGFVITSKSLKAEDRDSSQDSVTFRITVAPEHGYLINLGRGNATVSTFTQAEIDDMNICY
ILKHGDNATNDVFHFSIEDSGGNKLRNQQFRLNWAWISLEKEHYVVDEEVKFLEVVLKRR
GYLGETSFVSIGTKDNTALKDKDFRGKAQKQVQFNPGQTTATWKVRILSDSEYEVSETFQ
IVLSDPVMAALEFPEVATVEILDPDDESTVFIPSAVYNIEEDIGELLIPVLRSGDVNQEL
MVICYTQQVSATGTVPTTVLSYSDYISRPEDHHSILRFDKGEIEKSCRIVIIDDSLYEDE
ESFNVTLSMPMGGRLSSEFPTARVIIIPDMDDAPVFYFGSTEYHVDESDAFVEVQVWRTG
SDLSKGGTVTVRSRRTDPVSAEAGVDYVGISRNLDFAPGVTMQTFRVTILDDLGQPVLEG
PEKFELALRMPMNGILGEPSKTSIIINDSISDLPKVQFRHAVHVGSESSGQISATVYRSG
DISYKSTVRCYSRQGTAQVMMDFNERPNTDASIITFLPGEIEKPCLLVLVDDTEHEEEEE
LRLVLGSPKSESPFGASIGKQNETLIKIKDDADRSVISFEETKFSVNEPKKKGQVSVVKI
SVLRVGDTSKVSVVRVHTKDGSATSGEDYHPISEEIVFRQGDTEHHVEVEVLYDGVREMR
EAFTVHLKPDENMVAETKMSKVIIYIEESNSMADVTFPSIPVVISLFNYDDIEQSNPSLP
VAGYPVICVTACNPKYPDYHKTGSICVSESINNTLTRYRWLVSAPTGPDGVTSPMREVDF
DTFFTSSKLITLDSVYFQAGSRVQCAARAVNSNGDEGLEQTSSIVSISTEGMCQPRVVGT
VGAEPFSARLRYSGAEETDHPNLIKLTVTMPHIDGMLPVVSTRPLSNFELTLSPDGTRVG
HHRCSNLLDYTEVKTNYGFLTEATKNPEIIGQTAPYQYSTSLRGSSTLRFYRNLNLEACL
WEFTSYYDMSELLSDCGGTIGTDGQVLNLIQSFVTLRVPLHVSYVFHSPVGAGGWQHFDL
QSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINGLGQLVVNFRTEARFRGLFV
LAHLASPLTSMVMCAEHPGLTFNLSLVRSEPTYSQPIQQWTFVSDFAVRDYSGLYTVKLI
PCTSPPSLEYTLPPVCSPREPLTFDLDIRFQQVSDPVAAEFSLNTQMILLSKRTLWLSDG
SMGFGQESDTAFSQGDTIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVPKYNPGNFE
FGCLADAPSLLYRFKIIDKAQPETQAHSFGNVAFNAFLAVDDPGALVLVRQSGADGFRMN
SAALFQVAAGREWYIHTIYTVRSRDNANRGIGKRSLEYHAISQHSDRLPKGHHRPRRSSS
DEPEVVDEIGMENNRGTNILHISLDRSSQQKMSPEIEIFTKGIIPHELNQRDSDDSLVLI
IGIFVGLLLTVLLIIVVVLLVRSKQEKKEVPRNTTSTEPMITQNLNKSDSSEV
NT seq
9342 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattattccttcgcatctgcacgggactggcgctgctttgcttctgctcgca
ttgattctgacaggtgatgccgtagcgagtgtttttgacagctatggattatcatacgcc
ctgaggcccgagctctcggaagacacgatactggttgccaataatgggatccgcgtgcct
ttcgggagatcagttttcattgatcccattaacgatttggtggtccaagttcagcccggc
gacagatgcagcatcacagttttggacaacgatccgctgtctcaaagaccaggacacttg
tctccgaaaaagtttccgtgtgaatttggccccaacgacgtaaagtattcacactttggc
tcccggagtcccccgaaagacagagtgagattacagctcaggtacgacacccaaacggat
acaataataataccgttcatgatggaggtggaggtgatcttcacacagctggaagtgctg
acgaaaaacatgccccttactgttgacaaactgctgggcaccagtaatcccatcgacaga
ggaattttggagttcacctttgacagaagctcacagcaatgcaaaatagcttcgctcacc
agcggcaacgtgattccccgatatgggaaacttgtggatgaggagagcctcggaacaatg
gtaaattgtgatgaattcattaggatgaacatccattatcagcatacttttacttcaaag
tccccgaacagagattacatcccaatgctggtggaattatatgataaagaaggaaatgtg
cttaagcaggaatttttccagattttggtgcgaataaaagacggagaggacaacacgccc
cctaagcccagctttgttgccatgatgatgatggaagtcgaccagtttgttatgacagca
ataaccgtagacatgctggctgctgaggatgtggagtctaatcctgacgaattaattttc
aacatcacttcccctctctcctttgaagagggctacatagtcagcacagatgacaggaat
ttacccataacctcattttaccagggagacctcaaagaattgaaaattgcttataaacct
cctgctgtggattcagacacagagaggattttccaggttgagcttgaagttgtggacaca
gaaggggctgtgtctgactcgtttgaattcatgattgttgtcaagccgatgaacactttg
gcccctgtggttacaaggaacactggtcagctactgtatgaaggccagtccaggccattg
tctagttcacagaatctagaaatcagtgatgaggacaatttagacaaagtacgaattagt
gtaattgatggcttgaggcatggagcattaactgttctgggctccaggagaaaatttttc
accccagctgaccttgacgctggagtagtcatttatcagcatgatggtagtgatacatac
agtgataacattatcttcaggatgacggatggcacaaatgaagtggaatttttgtttccc
atcactgttgtgcctacagatgatgaggcacctattatcaatgccaacactggtttgatt
ttgtttaaaaatcaagttatgcagattttcccatcaatgctcagtgctgcagatattgac
tcagaagattctacaataaaatttgtattagagcttccctttccaacagtggggcaggtg
ttgctgcgtcagtctgaggcaccaaaggacccatctacttggaagtttaatacagaggat
gagatgtatgagaaagtagtgactgagtggctgcagcaggacattatcgatggaaaactg
ttttacaagcacacggggcctcacagcacgagcacagtcatggatcaatttgtgtttaga
gtacaagatgacaatgatcctccaaataagtcaggtaagagcacattcataatcaaaata
attcctgttgatgacctcccgcctgaactttaccctagtacaaccttacaaatgatggtt
cacgagtaccaactgacgtacttccggaaaaaattcctccgctacactgaccttgattca
gaggatcgagatttaaaatacaccattatccaaccacctacagacacagacgagaacagc
cctgttatattaggagccctggttttgactgaaaccccaaacactgaagtcacaacgttc
acacaggcacagattaatcatcacaaaatagcctacaaaccacctgatcttgagcttgga
attacctctcgtgttctacagttcagatacactgtggaagatgcctccagaaatagtgtg
gagggagtttttacaatattcttaaagcctgtggacaacaagccacctgaaataacaaac
accgggtttactgtgctggaacgtggcagacatatcctcaccagagccgagttggacacc
acggacacagacacagacagcagcaagataacattcactgttacacagcctcctcttcat
ggtcaggtccagttcatattcactcacatgacaaaaggggataccttcaaccttgagaat
attgtaaatggaatgatttcatacatcaacaatggagatgaatcaacagtagacttgata
aaaatagacgtcagtgatggggtgcatgttgttccaatttctataaaaattacagtgaag
ccaattgatgatgagactccaacaatcgatctgccagcgggtacaataggctcctacata
gatgtactagaaaatgaagcaacagaaatcactagtaatgtaattcagggaagagatgag
gatacagatgaccttcgtttgaccttcatcgttgaagacaaaccatcatttggtgaaatc
ctagtgaaaggagttccatcgagcacatttactcaagctgatatcattaacggctttgtg
gtttatgcccatacaagcggagagattggcgtaaacacaaaggaggactttttcaatctc
actctgactgatatgtctgatgagtggactataggaggaaataaaattacaggtgtcaga
gttcatgtaactattcttcccctggacagtcaggctcctgaggtctttgttgggccacag
tttactgttactgagggagaaaaaaatgtcattcagattcttcacataagtgctgatgat
gtagacacccctaatgatgaccttctttgtacaattattgttcaaccgacttcagggtat
gtggaaaacatctctccagcaccaggttcagagaaatccaggtctgggacagctattagt
gctttcaccatcaaagacattagacagaatcacatttactatgttcaaagcattcacaaa
ggagttgagccagtggaggacaggtttaccttcagatgttctgatggcatcaatttctct
gaaaggcacttttttcccatctccgtaatcccctctaatgatgaaaagccagagatttac
atgagagaatttgtggttatggagggcatgaacatagttattgacactcccatactgaac
ggtgctgatgcagacctcccgtctgatcagctcacatttttcattgccaaacctcccaga
catggatttattcttaatcagctcaccactggaactctccctgtgtcaaacttcaccttg
gaacagatcagggatggctctagtattgtgtatgagcatgatgacacagagacaacagaa
gatagctttgaaattgtcctcacagatggaaaattcagtgtagagaaaacagtaatagtt
atggttattcctgtggatgatgaaaccccgaggatggctattaatgatggcctagaaatt
gagataggtgatgttgaagtaattaacaataatgttttaaaagccactgatctggactct
gaggatagtacactcatgtatattataaaatatgggcctggccaggggtatttgcaaaga
acaatgccaactggtgaattgcaaaatatctcagttgggatgaattttacacaaaatgaa
gtagatcagggattgattttgtacatccacaatgggcaagagggaatccgtgacctcatt
aaatttgatgtgacagatggaatcaaccctttaattgacagatacttctatgtaacaatt
ggtggcatcgacatagttttccctgatgtaatcaataaaggagtctcccttaaagaggga
ggccgagttaccttgacaactgatcttcttagtacaagtgacctgaacagtccagatgag
cacttggttttcacaatcacccgtgctcctgtgagaggacacctggaatgcacagacaca
cctgggatgccaatctcatcctttactcagctccagctggctggtagcaaaatctactac
attcacacagccgacgacgaggtgaaaatggatagctttgagtttgaagtgactgatggc
tacaaccccgtgttccgcacttttcgcatctccatcactggcgtggacaacaagaagcct
gtggttacggtacacggcctggtggtgattgagggagagaataaactcatcacacctttt
gaaataacagttgaagacagagacaccgttgaccgcctgttgagattcacagttactcaa
atccctgttcacggtcgcctgctcttcaacaacagtcaacctgtcacctctttcacaaag
caagacctaaatgagaacatgatcagctacaaacatgatggcacagagagcacagaggac
agtttctccttcaccgtcactgatggaacccacacagacttttacgtcttccccgacacg
gttttcgagacccgaaaaccccaagtgatgaagattactgttcttgctgtggataatggg
gtgcctcacatcatagttaacaaaggtgcccagacattgagggtgatggagagagatctc
ttggggtttgtgatcacaagtaagtccctcaaagcagaggacagagacagcagtcaggat
tctgtgacttttaggattactgttgccccagaacacggttacctgatcaaccttggcaga
ggaaatgcaactgtctccacattcacacaagctgaaatcgatgatatgaacatatgctac
attctgaagcacggtgacaatgcaacaaatgacgttttccatttctccattgaggatagt
ggaggcaacaagctgagaaaccagcagttcaggctaaattgggcttggatttccttggaa
aaggaacactatgtggtggacgaggaggtcaagttcctagaggtggtgctgaaacgtcgt
ggttacctgggagagacttcgtttgtcagcatcggcacaaaggataatactgcactgaag
gacaaagacttccgtgggaaagctcagaaacaggtgcagttcaacccaggccagaccaca
gccacctggaaagtcagaatcctgtcagacagcgagtatgaggtgtcagaaaccttccaa
attgttctgtccgacccggtgatggctgctctcgaattcccagaggttgctacagtggag
atcctggacccagatgacgaatcaacagtgttcataccctcagctgtgtacaacatagag
gaggacattggtgagctgctcatccctgtactcagaagtggggatgtgaatcaagagctt
atggttatttgctacactcagcaagtttccgccacaggcactgtccccaccactgtgctg
tcctactctgattacatctctaggcctgaggaccatcacagcatcctgcgctttgacaag
ggagagatagagaaatcctgtcggatagtgataattgatgattccctgtacgaagatgag
gaaagcttcaatgtcaccctcagcatgcccatgggaggacgcctcagctcagagttcccc
acagccagagtcataatcattccagatatggatgatgctccggttttctactttggaagc
acggaataccacgtggatgagagtgacgcctttgtggaggtgcaggtgtggaggacagga
tctgatctttccaaaggaggaactgtgacagtacgctccagaaggaccgatccggtctca
gctgaggctggcgtggattatgtggggatcagccggaatctggattttgctccgggcgtc
accatgcaaacatttcgcgtgacgatcctggatgatcttggtcagccggtcctggaaggt
ccagaaaagtttgagctggctctgcgaatgccgatgaacggaatcctcggcgagccgagc
aaaacgtccatcatcatcaatgactccatctctgacttgcccaaagtgcagttccggcat
gctgtgcatgtggggagtgaaagctcaggacaaatctcagctacggtgtaccgcagtggc
gacatcagctacaagtcaacagtccgctgttacagcaggcaggggacagcccaggtgatg
atggactttaatgaaaggccaaacacagatgcatccatcattaccttcctaccaggagag
attgaaaaaccttgtttacttgtgctggttgatgacacggaacacgaggaggaggaagag
cttcgtctcgtcttggggagtcccaagagcgaatctccgtttggagcatctattggaaag
caaaatgaaactctcattaaaattaaagatgatgcagacagatctgttattagttttgaa
gaaaccaaattcagtgtgaacgaaccaaagaaaaaaggtcaagtctcggtggtaaagatc
tcagtgttgcgtgtcggagacacctctaaagtctctgttgttcgagtgcacaccaaagac
ggatctgctacctcaggggaggactaccatccaatatctgaggaaattgtgttcagacag
ggagacacagagcatcatgtggaggtggaggttttatatgatggtgtcagagaaatgagg
gaggccttcacagtccatcttaagcctgacgagaacatggtggcagaaacaaagatgagc
aaagtcatcatctacattgaagagagcaacagcatggcagatgtgacgtttccctccatt
cccgtcgtgatttctctgtttaattatgatgacatcgaacaaagcaacccctcccttcct
gtggctggataccctgtcatttgtgtcactgcctgtaaccccaagtatccagactaccac
aaaacagggtctatctgtgtgagcgagagcatcaacaacacgttaactcgctatcgctgg
cttgttagcgcccccaccggtccagatggtgtcactagcccaatgagggaggtagacttt
gacactttcttcacttcctccaaactcataactctggactcagtctatttccaggccggc
tccagggtccaatgcgctgcccgggctgtgaactctaatggggatgaaggactagaacaa
actagctccatagtgtcaatcagcacagagggaatgtgtcagcctcgtgttgtaggcacg
gttggggctgagccattttctgccaggctgcgatacagcggagcagaggaaacagaccat
ccaaacctcatcaaattaactgtcaccatgcctcacattgatggaatgttgcctgttgta
tccacccgacccctttctaattttgagctgacgctgagccccgatgggacccgtgtcggc
caccatcgctgctccaatttgttggactacactgaggtcaagaccaactacggcttttta
accgaagctaccaagaatccagagattattggacagacagcgccttaccagtacagcact
tctctgaggggatccagcactctacggttctacagaaacctcaacttggaggcttgttta
tgggaattcaccagctactatgacatgtcagagcttctcagtgactgtggaggcaccatc
gggactgatggacaggtgctgaatctcatccaatcctttgtgaccctccgagtcccactg
catgtgtcctacgtcttccattctcctgtgggagcaggaggctggcagcactttgacttg
cagtcagagctaaggctcacgtttgtgtacgacactgccatcttgtggcgagatggtatt
gggagcccaccagaggctgaactgcaaggtgccctctacccaaccagcatgcgtataaac
ggcctggggcaactagtagttaacttccgcactgaggctcgattcagaggcctgtttgtg
cttgcacatctagcttcacctctgacctcaatggtcatgtgtgcagaacaccctggttta
acgtttaacctcagccttgttaggagtgagccaacctacagtcagcccattcaacagtgg
acattcgtctctgattttgctgtgcgtgactactctggcttatacacagtaaagctgatc
ccctgtacttcccctccaagcctagagtacacccttcctcctgtctgcagtcctagagag
cccctcacctttgatttggatatccgctttcagcaggttagcgatccagtggctgctgaa
ttcagcttaaacacgcagatgatcttgttgtccaaacggacactctggctgtcagatggc
tccatgggcttcggacaggagagtgatacagctttctcacagggggacacaatttatggg
agagtgatggtggatccagttcagaacttgggcgactcctttatttgcaacatagagaaa
gtgttcctctgcactggtgctgatggctacgtcccaaaatacaacccaggcaactttgag
tttggttgcctggctgatgctccgtcccttctgtacaggttcaagattattgacaaggcc
cagccagagacccaggcccattcctttggcaatgttgcctttaatgctttcctggcagtg
gatgaccctggtgctttggttctggtcagacagtctggggcagatggtttcagaatgaat
tctgcagctctctttcaggtggctgcggggagagagtggtacattcatacaatctacaca
gtccgttcccgggacaatgcgaatcgggggatagggaagagaagcttggaatatcacgcg
atcagccaacactcggatcgtctacctaagggtcaccatcgacccagaaggtcttccagc
gatgagcctgaagtagttgatgagattggcatggaaaacaaccgtggtaccaacatcttg
cacatctcactggaccgtagcagccagcagaagatgagtccagagatagagatcttcacc
aaaggaatcatcccccatgagctcaaccagagagacagtgacgatagccttgtgttaatc
attgggatctttgttggattgctcctcactgtgcttctcattattgtagtggtcttactg
gtgcggtccaagcaggagaagaaagaagtacccaggaacaccaccagtacagaacccatg
attactcaaaacctcaacaaaagtgacagttctgaggtctaa
DBGET
integrated database retrieval system
