Gambusia affinis (western mosquitofish): 122832337
Help
Entry
122832337 CDS
T07758
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122832337 (lamb2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DUF6471
WbqC
Motif
Other DBs
NCBI-GeneID:
122832337
NCBI-ProteinID:
XP_043974913
LinkDB
All DBs
Position
LG01:17621086..17666494
Genome browser
AA seq
1845 aa
AA seq
DB search
MSNLLAIKMPVKMIALSLLVLALNAFGQELPSSPHGCTEGSCYPATGNLLIGRAVNLTAT
STCGLNGPEQFCIVSYLQDPEKCFECDSRRPYDPYYHRNSHRIENVIYLTDLNGNENFWK
SVNGKEDVSIRLNLEAEFHFTHLIMKFKTFRPAALIIERSADFGRTWRPYRYFAKNCTRT
FPGIPANGLHRINDVICEERYSDIEPSKDGEVIFKVLDPAIPVEDPYSLDIQELLRITNL
RINFTKLNTLGDDLLDRRSDVLQKYYYAVNELVVRGSCFCYGHASECAPVPGVNTHETGM
IHGRCVCKHNTEGLNCERCKDFHNDSPWRPAETEDPHTCRECNCNGHTNQCHFDMAVYLA
TGYTSGGVCDNCLHNTMGRNCEMCKPYYYQDPNRDIRDPRVCVACDCDPVGSLEGGVCDS
HTDLGKGMITGQCRCKENVKGKRCDDCKAGYYGLSERNPLGCQPCNCDPRGIIQMDAPCD
QISGDCFCKRYVTGRYCNQCLPEYWGLSHDLGGCRPCECDFGGAFNNRCMMDSGQCDCRR
HFIGRQCSEVQPGYFCAPLDYYKYEAEEAAGRSPTDPSLPGQVRPQAADDCIQQLSNQAR
RHRRHRRISSLQQSQAALRRIRQLQQTPDVTTVHREHAPSHIATWTGPGFARVKDGAGLV
FTIDNIPYAMEYEVIIRYEPESTEDWEAVVSITSVELPSSLRCGNLLPTEQLYTETLLHS
NRYILMSRPFCFEPSNRYVVAIRFQRHGVGYRHLTAFILIDSLVLIPKYTELPGFHGSDP
DSEQHRKDMVRYMCLDSFMITPMPKLAEMCTKLICGISANIHDGALRCECDPQGSISSEC
EKVGGQCRCKANVIGRRCDQCAAGTYGFGMNGCYACDCHPEGSFSHQCDPVTGQCSCRQG
ATGRQCSDCQPGQWGFPSCSPCQCNGHADLCDPRTGECRGCRDNTAGHFCERCVEGFYGN
PVLGSGDHCHPCPCPGNPGSNHFNGYSCQTDHTFGQIICNCKPGYTGPRCDQCAPGYYGN
PEQPGGLCLRCKCNDNIDPQDPRSCDPRTGQCLRCLYHTDGPSCSRCEKGYFGNALVRDC
RRCTCVTAGTMESACSEGQCVCDPYSGACPCRESVVGNNCDQCAPNHWNYGQPDGCQPCN
CDQRHSEGDRCNMFTGQCLCRPGFGGQRCTKCQENHWGDPEVECRECGCHPLGSQTRQCN
RETGQCECRNGMAGPRCDECARGFTGIFPNCVPCHQCFDQMDDHLCQIRRDLEHIQYDIQ
KILESGNTSGVWINSTMELEQKLNQVRELIDMGDTEKIHQLIGQSIDDLRPEIVLINSRL
TGINQDINKTEEADEVLKRALTDLENELMDLNATLALKQELLDKYLTSGFSDQFDKVKKY
YQVSQQAEEKCNASVLFPTSPVEQSKQNREITEKMLNTTKDELLQNLTALNSLNELHEKT
QNLSETVQQLSQMVCGGASNTSQNGSCFDNQCSCHDNEGNFVCGGEGCNGTKSSSLTALK
DATNLTDSLKAAMKELEGVTKKLQDIATQTQDVKNQTMNALEKAQKKKEYFEKNNEDLKD
LIKTIRDFLTEEGADPESIQMVAQQVLDIKLPVNRTTLDKLINQINSTIANLTNVQDIMN
ETSQLIRSAQDLMNKAEEAERQAVGVRDLVNSTKQALNVSEVAIEKAKAALKEARVNLNS
TKNSTAEVEKGLVQLEEKQMDVMMLLTNLSREVEALKNKTEINRLKAQDAINLANNASLQ
ASTLEEELNVTEKRYRELQLKMESLGSSESLNNIQEKVINMTKAAEDLLSEANNGINDLD
KLGELLKNNEERMKKQREELEDLKQNATDVRDQIQAGVQKYSNCV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacctcttggccattaagatgcccgtcaaaatgattgctttgagcctgctggtg
ctggctctgaatgcatttggacaggagctcccgtcaagccctcacggctgcactgaggga
agctgttacccagcaaccggaaaccttctgattggacgagctgtcaacctgaccgccacc
tcaacatgcggtctgaacggaccggagcagttctgtattgtcagctacctgcaggatcca
gaaaagtgtttcgagtgtgactcccgtcggccgtatgatccctactaccacagaaacagc
caccgcattgaaaacgtgatctacctcacagacctcaatgggaatgagaacttttggaaa
tctgtcaatggtaaggaggacgtcagcatcagattgaaccttgaggctgaattccacttc
acacatctcatcatgaagtttaagacttttcgccctgcagctttgatcatagagcgatca
gctgattttggccgcacatggcgcccctaccgctacttcgccaagaactgtaccagaacc
ttccctggaatccccgccaacggcttgcaccgtatcaacgacgtcatctgtgaagaacgc
tactctgatattgagccctctaaagatggagaggtcattttcaaagtgctggatccagca
attccagtagaagatccctacagcttggacattcaagaacttttgcgcatcaccaacctg
cgcatcaacttcacaaagctcaacacgctgggagacgacctgctggaccgccgctcggac
gtcctgcagaaatattactacgccgttaacgagctggtggtccgaggaagctgcttttgt
tacggacacgcttcagagtgcgcaccagtgccgggcgtaaacacccacgagactggcatg
atccatggccgctgtgtttgcaagcataatactgaaggtctgaactgcgaacgctgcaag
gatttccacaatgactcaccttggagaccagcggagacagaggacccacacacatgcaga
gagtgtaactgcaacggccacacaaaccagtgtcactttgacatggcggtgtatttggcg
acgggctacaccagtggtggagtttgtgacaactgcctgcacaacacaatgggacgcaac
tgtgagatgtgcaaaccgtactactaccaagaccccaacagggatattcgggaccctcgt
gtctgtgttgcttgtgactgtgacccggttggatcattggagggaggtgtgtgtgacagc
cacaccgacttgggaaaggggatgatcacaggacagtgtcgctgcaaagagaacgtgaag
ggcaagcgctgcgatgactgcaaggcgggttattatggactcagtgagagaaacccactg
ggatgccaaccttgcaactgtgacccccggggcatcatacagatggatgctccctgtgat
cagatcagtggggactgcttctgtaaaagatacgtcacgggtcgctactgcaaccagtgt
ctgcctgaatactggggtctcagtcatgacctgggtggctgcagaccttgtgagtgcgac
ttcggtggagcattcaacaacagatgcatgatggatagtgggcagtgcgactgcaggagg
catttcattggtcgacagtgttcggaggtgcagcctgggtatttctgcgctccactcgac
tactacaaatacgaggctgaagaggctgccggacgctcgcccaccgatccctcactgccg
ggccaggtccgcccgcaggcagcagacgactgcattcagcagctcagcaaccaggcgagg
aggcatcggcgacatcggcgcatttcaagcctgcagcagtctcaggcagcgctgagacgc
atccggcagcttcagcagacaccggacgtcacgacggtccacagagagcacgctcccagc
cacatcgccacctggactggtcccggttttgctcgcgtcaaagacggcgccggcttggtg
ttcaccatcgacaacatcccatacgccatggagtacgaagtcatcattcgctatgagcct
gagtccacagaggactgggaggctgtggtcagcatcacctctgttgagctgccctcaagt
ctccgatgtggaaaccttcttccgaccgaacagctctacactgaaaccctgctgcacagc
aacagatacatcctgatgtccaggccattttgttttgagcccagtaatcgctacgtggta
gcaatcaggttccagcgacacggagtcggttacagacaccttaccgctttcatcttgatt
gactcactggtattgatccccaagtacaccgagcttcctggtttccacggcagcgacccg
gactcagagcagcatcggaaggacatggtccgctacatgtgcctggattcctttatgatc
acgccgatgccaaagctggctgagatgtgcaccaaactcatctgtggcatctcagccaac
attcacgatggggccctgcgctgtgagtgtgaccctcagggttcaatcagcagcgagtgc
gagaaggtcggaggtcagtgccgctgtaaagctaacgtcattgggcggcggtgtgaccag
tgcgctgcaggaacctacggcttcggaatgaacggctgctatgcctgtgactgccaccca
gagggctccttcagccaccagtgtgacccggttacaggtcagtgttcgtgcaggcaggga
gccaccgggcgccagtgctccgactgccaaccgggccagtggggcttccccagctgcagc
ccctgtcagtgtaacggccacgccgacctctgtgacccccggacaggagagtgcagaggc
tgcagagacaacacggcaggacacttctgcgaacgctgtgtagaaggtttctatggcaac
ccagtgcttggatcgggggatcactgtcacccctgcccctgccctggaaaccctggttcc
aaccacttcaatggctattcctgtcaaactgaccacaccttcggtcagatcatatgtaac
tgcaaaccaggttatacaggtcctcgctgcgatcagtgtgctccaggttactacggcaac
ccagagcagcctggtggactgtgtctccgctgcaagtgcaatgataacatcgacccccag
gatccgaggtcatgtgaccccaggactgggcagtgcctcaggtgcctgtaccacacggac
gggccgtcctgttcccggtgcgagaaaggatacttcggcaacgctttggtcagggactgc
agacggtgcacctgtgtgactgctggcactatggagtcagcctgcagtgagggacagtgt
gtctgtgacccctactctggggcctgtccttgcagggagtctgtggtgggcaacaactgt
gaccagtgtgcccccaaccactggaattacggtcagccagatggctgccagccatgcaac
tgtgaccagcggcattctgagggggaccggtgcaacatgttcacaggccagtgtctgtgt
cggcccggcttcggaggacaacgttgcaccaagtgccaagagaaccactggggcgaccca
gaggtggagtgtagagagtgcggctgtcacccgctgggctcacagacacgccagtgtaac
cgagagacagggcagtgcgagtgcaggaacgggatggcggggccccggtgcgatgagtgc
gcgcgcggcttcacgggcatcttccccaactgtgtcccatgtcatcagtgcttcgatcag
atggacgaccacttgtgccagatcagaagagacttggagcacatccagtacgacatccag
aagatcctggagagcgggaacacatccggagtctggatcaacagcaccatggagcttgag
cagaagctgaaccaggtgcgggagctgattgatatgggggacacggaaaagatccaccag
ctgattggacagagcatcgatgacctcagacctgagattgttctcattaactcgcgtcta
acgggaatcaaccaagacataaacaaaactgaagaggcggatgaggtcttaaaacgcgct
ctgactgacctggagaatgaactgatggatctcaatgctacgctggctctcaagcaggag
ctgctggacaaatacctcacctcaggattttcagatcagtttgacaaagtgaagaagtac
taccaagtgtcacagcaggctgaggagaagtgcaacgcctcggtgttgtttcctaccagt
ccagttgaacaatccaaacaaaatcgagagattaccgagaagatgctgaacaccacaaag
gacgagctcctccagaatctaaccgctctcaattcattaaacgagctgcacgagaagacc
caaaacctcagtgagacggtccagcaactcagccaaatggtgtgtggtggtgctagtaat
accagccaaaatggcagctgctttgacaaccagtgtagttgccatgacaatgagggtaac
tttgtttgtggaggagagggatgcaatgggacaaagagttcttctttgactgcgctgaag
gatgccacaaacctcacagacagtctgaaagctgccatgaaggagctggagggcgtcaca
aagaagcttcaggacatagctacccagacccaggatgtgaagaaccagaccatgaacgct
ctggagaaagcccagaagaagaaagaatactttgaaaaaaacaatgaagaccttaaagac
ctcattaagaccatcagagacttcctcacagaggagggagcagatcctgagagcatccag
atggtagcccagcaggtcttagacatcaagctgccggtcaacaggaccactttggacaaa
ctgatcaaccagatcaacagcaccattgccaatctcaccaacgttcaggacattatgaat
gaaacttcgcagcttatccgcagtgctcaagacctgatgaataaagctgaagaggcagag
agacaagcagtgggtgtgagggatctagtcaatagcaccaaacaggccttaaatgtctct
gaggtggccatagagaaagcaaaggcagccctgaaggaggcccgggtcaacctgaacagc
accaagaactccactgctgaggtggaaaaggggttggtgcagcttgaggagaagcagatg
gacgtcatgatgcttctaaccaacctgtccagggaggtggaagccctaaagaacaagaca
gagataaacagactaaaggctcaggacgccataaacctggctaacaacgcctctctccag
gcatccacactggaggaggagctcaatgtaacagagaaacgttaccgtgagctgcagttg
aagatggagtctcttggcagctctgaaagtctgaacaacatccaagagaaggtcataaat
atgacgaaggctgcagaagatctcctcagtgaagccaataatgggataaatgatcttgac
aaactaggggaattattgaaaaacaacgaggagcggatgaagaagcagcgtgaggagctg
gaggacctgaagcaaaacgccactgatgtgagagaccaaatccaggcaggagtgcagaaa
tacagtaactgtgtgtga
DBGET
integrated database retrieval system