Gambusia affinis (western mosquitofish): 122832375
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Entry
122832375 CDS
T07758
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122832375 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122832375 (trip12)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122832375 (trip12)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
HECT type E3
122832375 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
122832375
NCBI-ProteinID:
XP_043974985
LinkDB
All DBs
Position
LG06:complement(16682531..16707119)
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AA seq
2078 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTAAGRLQSEQVKHKPNSPPESRRPNSKAPKAT
ASSATGQSRGHSSRRSGLNLSVASLVLQDDSQAAGTSEQERPGHQSKSEGTRGLKRSDAP
DQISVLGPTPSKKPKSVPPPKSNTSETKKGPAKSKKRQASSEAPASTGRNQSKKSAASLA
SPVQKRKKSDSFPGLSSTAGSLPNCTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSASS
SSSSSTTGTNSAATQGARLKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFDWA
TRFNPKVNLPKPKLSLPGTSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFE
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQARGLAHCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVDDSLSLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMLS
LMCSNCPSLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDAMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMADILMQKLPDIFSVYFRREGVMHQVKNLAESESFLVTSPPKACS
SGTASLCTTTITSVSTTSANIATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQVFFAAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPS
RTAGVSGLARAPPKDSISNNREKIKAWIKEQASKFVERYFNAENVDGSNPALNVLQRLCT
ATEQLNLQVDGGLECLVEISNIVSESDVSSFEIQHSGLVKQLLIYLTSNADRDLLSRDVR
LKRFLNIFAGCPLPGIEPVGRLDPTNNSAYMALVHKMNSCLSQMEQFPVKVHDFPSGNGN
GSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRI
REEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQA
EEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEEGSKDSVGGKRGRAQTAPTKTSPRN
AKKQDELWHGIQSKSNTELCDNAWPDGVCPSVANPLETYLTTEPPESITFDDPSLEVTLL
LRILHSISRFWFYLYDNAACKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIEL
GKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTIN
REDLLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYALVSQELQRADLGLWRGEE
ITLANPKGNQEGTKYMFNSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLL
DLPLGLPFYKWMLRHETSISSHDLMNIDPSVAKSIQHLEDIIRQKKRLEQDRSQTRETLQ
QALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGV
SRQFDSFREGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSR
AIRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLP
SVMTCVNYLKLPDYSSIEVMREKLLIAAREGQQSFHLS
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagcagctggaaggttgcagtcagagcaggtaaaa
cataaaccaaattccccacctgaaagtagaagacctaattctaaggctcccaaagccact
gccagctcagccactggccagtccagagggcacagctcaagaagaagcggtcttaaccta
tcagtggcttcattagtgctgcaagacgactcgcaggctgcgggaacatccgaacaggaa
cgaccaggccaccagtcaaaaagtgagggcaccagagggcttaaacgaagcgacgctcct
gaccaaattagcgtccttgggcccaccccttccaagaagcccaaatcagtcccaccaccc
aaaagtaatacctcagagaccaagaaaggcccagctaagtccaagaagagacaggcttct
tcagaggcacctgcatcgacaggtcgaaatcagagcaagaagagtgcggccagcttggcc
tctccagtccagaaacggaaaaaatcagactctttcccaggtctaagtagcaccgctggg
tctctacccaattgtaccgaaggcagaactgcaaaaccaaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacagactcatcctcctctgcctcctcc
tcttcttcttcctctaccacaggcaccaacagtgctgctacgcagggcgctcgtttaaaa
cagggaaaagatcagacaaaagctcgtcgttccagatcagcatctagtccctctccgcgt
cgcagtacacgagacaaggagcaggccaaaaccgccagctcttcaaagtttgactgggca
acacgcttcaaccccaaagtaaacctgccaaaacccaaactttccttacctggaacttcc
aaaactgagacctccaaacctgggccatctggactacaagctaaactagcaagtttgagg
aaatccacaaagaagcgcagcgagtctcctccagcagagctccccagttttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgctcgccgacaggagaaaatggctgactccgacaacaaccaa
gatggggccaattcatcagctgctcgcactgatgaggcgtcacaaggagcttcagcttca
agctcagttgccggagcagtgggcatgaccacttctggagagagtgagtctgatgattca
gaaatgggaaggcttcaagcgcttctggaagccagaggtctcccaccacatctttttgga
ccactggggccccgcatgtcgcagctgtttcacaggaccataggcagtggagccagttcc
aaggcccagcagctgctgcagggccttcaggccacaggggacgagtctcaacagctccaa
gctgccattgagatgtgccagctgctggtgatgggcaatgaggaaactcttggtggattt
cctgtcaagagtgtggtgcctgctttgattacactgttacagatggagcataattttgaa
attatgaatcatgcgtcgcgtgcgctcacttacatgatggaggcacttcctcgttcttct
gctgtcgtggttgacgctattcctgtcttcctggagaaacttcaggtgatccagttcata
gacgtagcagaacaagccctcacagccttggaaatgttgtcaaggcgacacagcaaagca
attttacaggctaggggcctggctcactgcctcctctacctggagttcttcagcatcaat
gcccagaggaatgcgttggccatagcagcgaactgctgccagagcattactccagacgag
tttcactttgttgatgattcgctctcgctgttgactcagagacttacacatcaggataag
aagtccgttgaaagcacttgtctctgttttgccagactggtggacaactttcaacacgaa
gagaacctgctgcagcaggtggcatcgagggacctgttgaccaacatccagcagttgcta
gttgtgacgcctcccgttctcagctcggggatgtttattatggttgtgcgcatgctctcc
ctgatgtgctccaactgcccaagtctggcagtccagcttatgaaacaaaacatagcagaa
actctgcgtttcctcttgtgcggtgcgtcaaatggaagctgccaggaacaaattgagctc
gtacctcgaagcccccaggaactctatgaactcacctccctcatttgtgaactgatgccc
tgcctccccagagagggcatctttgcagttgatgctatgctgaagaaaggcagcgctcaa
acaaccgaaggtgcaatctggcagtggagggatgaccggggcttgtggcatccttacaac
cgcatcgacagccgcatcattgagacggcccaccagaacggagaagatgagatcagcttg
tcgactctgggccgtgtatacacaattgacttcaactctatgcagcagataaatgaagac
acaggaacagcgcgtggtatccagaggaagcctaatcctcttgccaatcctaacacaggg
agtcaccaagaagttcgtcgggaagatgcaagagcccagttgatgaaggaggaccctgag
ctggcgaagtgctttattaaaacactgtttggggtcttgtatgaggtctacagctcatca
gctggccctgctgtccgacacaagtgccttagagccatcctcaggatcatctacttcgct
gacgccgagctgctgaaggatgtgctgaggaaccatgctgtgtccagtcacattgcctcc
atgctgtccagccaggacctgaagattgtggttggatctctgcagatggcagatatcctc
atgcagaagctgcctgatatcttcagtgtctattttagaagagaaggtgtaatgcatcaa
gtaaagaaccttgcagagtctgagagctttcttgtcactagtcccccaaaggcctgctcc
agtggtactgccagtctctgtaccacaacaatcaccagtgtatccacgacgtcggctaac
attgcaactcctgacctggggtcccccagctttcagcacagcatggatgactcactggac
ctcagtccccaggggcggttaagtgatgtcctaaagagaaaacgccttccaaaaagaggg
cccagaaggcctaagtactctcccccaagagacgatgataaagtagacaatcaggtcttc
ttcgcagccaagagccccaccagtactcagtcacccaagtcgtcattcttggccagcctc
aatcctaagacctgggggaagctgggagctcaaactaacaatgccaactctgagccatca
cgcacagccggagtaagcggcctggcaagagcgcctcccaaagactctatttcaaataac
agagagaaaattaaagcctggattaaagagcaggcaagtaagtttgtggagcgctacttc
aacgctgagaatgtggacggcagcaaccccgctctgaatgttctccagagactttgcacg
gccaccgagcagctgaacctgcaggtggatggtgggttggagtgcctggtggaaatctcc
aacatcgtgtcagaatctgacgtgtcatcgtttgagatccagcacagcggtctggtgaag
cagcttctgatctatcttacctccaacgcggacagagacctgctcagtcgtgacgtgcgg
ctcaagaggttcctcaacatcttcgctggttgtccgctgccgggtattgagcctgttggt
cgtctggatcccacaaataattcggcgtacatggcactcgtacacaagatgaacagctgt
ctgagccaaatggagcagttcccagtcaaggtgcacgacttccccagtggcaatggcaac
ggcagcaggggatctcaggcgctgaagttcttcaacacacatcagctcaagtgtcagctg
caaaggcacccagactgcactaatgttaaacagtggaaaggcggccctgtgaagatcgac
ccactggccctggtgcaagcgatcgagagatatctggtggtcagaggttatggtagaatc
agggaagaagatgaggacagcgacgatgacggttcagatgatgaaatagacgaatcattg
gcggcacagttcctaaattctggcagcgtgcgtcacagactacagttctacattggtgac
cacctgctgccatacaacatgacggtgtaccaggctgtccggcaatacagtcttcaggca
gaagaagagcgggagtcgacggatgacgaagcaaatccactggggagggctggaatctgg
accaaaacgcacacaatatggtataagcctgtgagagaagacgaggaaggcagtaaggac
tcggtgggtggaaagcgaggcagagcccagactgctcccactaaaacctcaccgcgcaac
gccaagaaacaggatgagctgtggcatggcatccaaagcaaaagcaatacagagctttgt
gacaacgcgtggccggatggcgtatgtcccagcgtcgccaatcctttggaaacatacctc
actacagagccaccagagagcataacctttgacgacccctctttagaggtcaccctgctg
ctgaggatccttcactccatcagtcgattctggttctacttgtatgataatgctgcgtgt
aaggaaattattccaacctctgagttcattaatagtaaactgactgccaaagccaatcgt
cagctacaagacccactggtcatcatgacggggaacatccccacctggcttatcgagctg
ggaaagacctgccccttcttcttccccttcgacactcggcagatgttgttttatgtaacc
gccttcgatcgagacagagccatgcagcgcctgctggacacaaaccccgagatcaaccag
tcagattctcaggacagcagagtcgcaccacgtctagacaggaaaaagagaactataaac
cgtgaggatctattaaaacaggcagagtctgtgatgcaggacctcggcagctccagggca
atgctggagattcagtatgagaatgaggtgggcacggggctcggtcccacgcaggagttc
tacgctctggtgtctcaggagcttcagagagcggatcttggtctttggagaggcgaagag
attactctggccaatcctaaaggaaaccaagagggcaccaagtacatgttcaactccaga
ggactgtttgctgttccctttggcagaacaacaaaaccagcacacatagccaaaattaaa
atgaagttccgtttcttaggaaagttgatggccaaagcaattatggactttagactgctg
gatctgccgttggggcttccgttttataagtggatgctgcgacacgagacgtctataagc
tctcacgacttgatgaacattgatccgagtgtggccaagtccatccagcacctggaggat
atcatccgtcagaagaagaggttggaacaggaccgatcacagaccagagaaaccctccag
caggccctagagagcctgaacatgaacggctgctcggtggaggacctgggcttggacttc
actcttcctggcttcccaaacattgagctgaaaaagggcggaaaagacgtgccagtcaca
atctacaacctggaggagtacctcaggttggtggtgtactggaccttaaatgaaggagta
tcaagacagtttgactcattcagggaagggtttgagtcagtcttccctttgcatcacctg
cagtatttctaccctgaagagctggaccagttgctgtgcggcagtaaatcagagacatgg
gatgtgaagacgctgatggagtgctgtcgaccggaccacggctacacgcatgacagccgg
gccatccggttcctgttcgaggtgttgagcagcttcgatgccgagcagcagcggctcttt
ctccagtttgttactggaagcccgaggctgcctgtcggaggtttccggagcctcaacccc
cctctgacaattgtgaggaagacattcgagtcgacggagaaccccgacgacttcctgccc
tcagtcatgacctgcgtcaactacctgaagctgcctgactactccagcatagaggtcatg
cgagaaaaactgttgattgctgctcgcgagggccagcagtcgttccacctttcctga
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integrated database retrieval system
