Gambusia affinis (western mosquitofish): 122832567
Help
Entry
122832567 CDS
T07758
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122832567 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gaf01007
]
122832567 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122832567 (farsb)
Enzymes [BR:
gaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
122832567 (farsb)
Amino acid related enzymes [BR:
gaf01007
]
Aminoacyl-tRNA synthetase
Class II (U)
122832567 (farsb)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122832567 (farsb)
Prokaryotic type
122832567 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
EF-1_beta_acid
B3_4
Arc1p_N_like
EAD7
Motif
Other DBs
NCBI-GeneID:
122832567
NCBI-ProteinID:
XP_043975377
LinkDB
All DBs
Position
LG06:complement(9904392..9917102)
Genome browser
AA seq
847 aa
AA seq
DB search
MPTVGVKRDFLFKALGRTYTDEEFDELCFEFGLELDEITSEREIISKEQGDSRASDASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYKRLSPDNGEPQRLIITKETAAVRP
YAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKAPG
DICFRPLNQTKEYTATQLMSLYKTDSHLKHYLPIIEDKPVYPVIYDSNGIVLSMPPIING
DHSRISLKTKNVFIECTATDLTKAKIVLDMIVTMFSGYCAQPFMVEQAEVVYPDGRTCIY
PELAYRKEKLSAEFINKKVGISESAERIAQLLTRMCLLSQPTGISDEIEVEIPPTRPDII
HACDIMEDAAIAYGFNKITRTTPSTYTVANQFPLNKLTELLRQDLAAAGFTEAFNFALCS
KDDIADKLGKKISETGAIHISNPKTAEFQVARTTLLPGLLKTIAANKKMPLPLKLFEISD
VVLKDESKDVGARNSRRFCAIYYNKTPGFEVIHGLLDRTMQLLEVKAVRGEGYHIQAADD
STFFPGRCAEIFVRGTSVGRLGVLHPDVISSFDLTMPCSALEMDLEPFLGHTAEILLTHD
VPMQETFKHPFPVPSPSQPNLPSRPPSTKTVFGDLSSQAGLKALNDFLTDRSYIEGFTVS
QADAAVFDAIPSPPSQAFCHLRRWYCHIKSFQTERARLPSARSQFVLPPTLPASPNNMSE
DDMDLFGSDDDEESAEAARLREQRLAEYAAKKSKKPALVAKSSILLDVKPWDDETDMAKM
EECVRSVAMEGLLWGQSKLVPVGYGIKKLQIGCVVEDDKVGTDLLEEAITAFEEYVQSVD
VAAFNKI
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagttaaaagagactttctctttaaagctttgggaagaacatacact
gatgaggagtttgacgagttatgctttgagtttgggctggagttggatgaaattacctca
gaaagggagataatcagcaaggagcagggtgactctagagcgtcagatgcatccgatgtt
attctgtataagatcgacgtgccagctaaccgctatgacctgctgtgtctggaggggctt
gtccgtggtctacaggtcttcaagaataagctcgaggcgcctcgatacaaacgcttgagc
ccagacaatggggagcctcagaggttgatcatcactaaagagacagcagcagtgcgaccc
tatgccgtggcagcagtgttgaggaacatcactttcactcaggagcgttatgacagtttc
attgagctgcaggagaagctacatcagaacatctgcaggaagaggagcctggttgccatt
ggcacccatgacctggacaccatctcaggtccgttcacctacacagctaaagctcccgga
gacatctgcttcagaccgctaaaccagaccaaagagtacacggctacccagctcatgagc
ctctacaagacagacagtcacttgaaacattatctccctattattgaagacaagcctgtt
tatccagtcatttatgacagcaacggcattgtactgtcaatgcctcctataatcaacggg
gaccattcaagaatcagtttaaagacgaagaacgtctttatcgagtgcacagcaactgat
cttactaaggcaaagatcgtgttggacatgatcgtgaccatgttcagcgggtattgtgct
cagcctttcatggtggagcaggctgaagtagtgtacccagatggaaggacctgcatatac
cccgaactggcttacaggaaggagaagctgtctgccgagttcatcaacaaaaaagttggc
atcagtgaatcagcggagagaattgctcagctcctgacccggatgtgcctcctctcccaa
cccaccggcatcagtgatgagattgaggtggagatcccccccacccgtccagacatcatc
cacgcctgtgacatcatggaggacgctgccatcgcctacgggtttaacaaaatcacccgc
actacgccaagcacctacaccgtagccaaccagtttcctctcaataaactgacagagctg
ctgagacaagacctggcagctgctggattcacagaggctttcaactttgctctgtgttct
aaagatgatatagcagacaagcttggaaaaaagatctctgagactggagctattcacatt
tccaaccccaaaactgcagagttccaggtggcacgcaccactttactacctggcctgctg
aaaacgatagctgccaacaagaagatgcctcttcctctcaaactgtttgagatatctgat
gtggtgctgaaggacgagagcaaagatgttggggcaaggaacagtcggcgtttctgtgcc
atttattacaacaagactccgggctttgaggtgatccatggcctgctggaccgaaccatg
cagctgctggaggtgaaagcagttcgtggagagggataccacatccaggctgcagacgat
tccaccttcttcccgggtcgctgtgctgagatctttgtccgcgggacgagtgtaggacgc
ctcggagtccttcaccctgacgtcataagcagctttgacctgaccatgccctgctctgct
ttggagatggacctcgaaccttttcttggccacactgctgaaatcctcctcacacatgac
gttcccatgcaggaaaccttcaagcacccgtttccagttcccagcccatcccagccgaat
ctgccatctcgtccgccttcaactaaaacggtgtttggcgatttgagctcacaggcaggc
ctcaaggcgcttaatgatttcctaacagacagaagctacatagagggtttcacggtgtcc
caagctgacgccgcagtgttcgatgccatcccttctccgccctcgcaggctttctgccac
ctccggcgctggtactgccacatcaagtccttccagacggagagagcgcggctcccgtca
gccaggagtcagtttgttctcccacccactctgcctgcctccccaaacaacatgagcgaa
gatgacatggaccttttcggttccgacgacgacgaagagagcgcagaggcagctcggctc
cgagagcagcgcctggccgagtatgccgccaagaagtctaagaagccggcgctcgtcgcc
aagtcctccatcctcctcgatgttaagccgtgggacgacgagacggacatggccaagatg
gaagagtgcgtccgtagcgtcgctatggagggcctgttgtgggggcagtccaagctggtg
ccagtgggctacgggatcaagaagctgcagatagggtgcgtagtggaggacgataaagtg
ggcactgatctgctggaggaagccatcactgcttttgaggaatacgttcagtctgtggat
gtggctgccttcaataagatctga
DBGET
integrated database retrieval system
