Gambusia affinis (western mosquitofish): 122832587
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Entry
122832587 CDS
T07758
Symbol
bicra
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122832587 (bicra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122832587 (bicra)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
122832587 (bicra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
122832587
NCBI-ProteinID:
XP_043975417
LinkDB
All DBs
Position
LG06:5112660..5132776
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AA seq
1793 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSETHLDTDDLLDGTSDPSSSFFSAAGGHVSEVQPA
VQLPVSESAGLPRVSVDLDFLEDDDILGGSPGGDGDSNGIGTNHEPCDILQQSLAEANIT
EQSLQEAGSELDLVSFGIPGLTQVVQTLPDAGSTAVGVGIGVGGAATIFPGSAQSTAGNP
GNATADMLGSVLAQQGLQLQPQVMNKTISVQPFMQQVGLGNVTLQPISSLQALSNGSQSG
PLGIGQIQVVGQPTVMTINQSGQQILAKAMGGYQEVSAAGSQAGLGLIQGNKTAVGAPAL
NGPAVSVSSTSSISAATMSAPAGLVGFGGGVAAPTQTQGQIMQNVIIQRTPTPIQPKPPQ
GGAIQPKIFKPQQQQPPPPPQAASQAQQNDAHKALGLQQLPVSAAQNVAFLAGKPGSNVV
LSTQAATQGSQFQQALFKQQAAPQSGKPLSLHLLNQQGSIVIPSQTVLQSQNHQFLLPQL
QAGGQILTQHPGGHIITSQGPGGQLIANQILTANQNINLGQVLTSQGHPGATHILSGPIQ
LQPGQMGTPTLFQMPVASLAQSQSQTQTSAASGHAQTVIQGLQNSLTMVGQVEGLSPAIS
LQTTLQAQPGAVPSAAGGQTAEAAVTMLGGSVEPAPQLLPQSSLLAVQPVSSAAASSSPS
MSVSTSSSVTAVGLVPQQAQSSPGRLLFTNQGSSMILSQESLQMFLQQEQRHQTENESTQ
SVGVPASVIVSSNSVTTAAPAVHDSQLTDSWLGQSHSPSPGPSHMTAVVKVPSGGAQQAL
KIQGMSSSPALTSHATTPPVAESPQPSQSPLTLTQQIQSPHHQQPPQSRPSSQPQTPSRS
CTPSSHTQLFIVHNQIAESPKPAATSAAQAQLQQTPPQQVHVQVQHQPLPRPASQPTPYQ
QEMPPMSQSPKPLPAAAAAAAAPPALHQFAAPPVSACAPAVVKAQVPLQGLTAGQQHHLQ
LVGAQIQTLSSITQPSPQHKQLLEKLQQVKQNIMLQAKPQPQATSQFNSQQDVPVDKVVM
TSSAGSDSPAQLPTMLQPTSVLVKTAAAGSSDLQVFSGAAGQAAAAATGNQTVTLASLTQ
PAQVQPKPGVISSVGGMTLGKAAMKIQVLGPALTQMLVPQPQPPLQTQLTSQTPPVKMPL
STEPSKEARMLEQLRKHQGSVLHPNYSAPFHSFDDTLHRLLPYHLYQGTANSSQDYQRVD
DEFERVSCQLLKRTQAMLDKYRYLLFTESKQRLGPSAEMVMIDRMFIQEEKVALNQDRIL
AKERPEEFAATVRMLESGVPSQPKPAPPDLPSASPAASTAAPALIPSPAPLLKVAPTPPP
APPAPPAPASPTPPPAPTIPSSSPFPPTKLVIKHGGGSASVSWSSSCPPAPAAKPVAPAA
PSSSSSSSSALNSQSAADDDDALPQRTSKPPIKTYEARSRIGLKLKIKQDQTGFSKVVHN
TALDPVHAPQPRSTQEPPPEPAKSQHLATPPNTVIRTQSPTASVTPTQSNLRNAPPSSST
TTQMNGSLDHHPVKHNPAASQTTCRLPLRKTYRENISPRVRPGVPGGLDESFSYPITTPS
PPRHEASTPPSERTVIASVRVEKRDREADPSLEGGRLGNTMDKMNEVFNRSVKTATHHHL
SLLLDREAAKEREDEHTDQDADKYKRFSGKNKHRTGGTFRMDQHAPGPPSPESSFARDSL
LPAKRCKSDSPDMDNASFSSGSPPDDSLNEHLQCAIDSILNLQQEPAVRGHHVRAGAGSR
SHQHQSQRPGDSAVSTHRVPPPTAPSAPSSSSLGPQVGGRGHNGSLVPQTQSR
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaggacggcaggtgccttctagatgtaatttgtgacccagaagctctaaat
gactttcttcatggatctgagacccatttggacactgacgaccttttggatggtacgagt
gacccctccagctcgttcttctctgccgctgggggccatgtttcagaggtccagcccgcg
gtccagctgccagtcagcgagtcggccggcctccccagagtcagcgtggacttggacttc
ctggaggacgatgacatcctgggcggctcgccgggcggagacggcgacagcaacggcatt
ggaacgaaccacgagccgtgcgacatcctgcagcagagcctggcggaggccaacatcact
gagcagagcctgcaggaagccgggtccgagctggacctggtgtccttcgggatcccgggc
ctcacccaggtggtccagaccctgcctgacgctggaagcaccgccgtcggggtaggcatc
ggcgtcggcggggcggcgaccattttccccgggtcggcacagagcacggcgggtaaccct
ggcaacgccacggccgacatgctggggtcggttctggcccagcaggggctccagctgcag
ccgcaggtgatgaacaaaaccatcagcgtccagccattcatgcagcaggtcggcctcggc
aacgtgacgcttcagcccatttccagcctacaggccctttccaacgggagccagtcggga
ccgttgggtatcggacagattcaggttgtgggccagccgacggtcatgaccattaaccag
tccgggcagcagatcctggccaaagccatgggcgggtaccaggaggtgtccgctgctggc
tctcaggccggtctgggcctgatccagggtaacaaaaccgcggtcggcgctccagcttta
aacggaccggctgtttctgtcagcagcacgagcagcatcagcgccgccaccatgagcgcc
cccgctgggctcgtgggcttcggcggaggagtggcggcgccgacacaaacacaaggccag
atcatgcagaacgtgatcatccagcgcacgccgacacccattcagcccaaacccccacag
gggggcgccatccagcccaaaatcttcaaaccgcagcagcagcagccgccgccgccgccg
caggcagcgtcccaggctcagcagaatgacgcacacaaagcacttgggctgcagcagctt
ccggtttctgctgcccagaatgtggccttcctggcgggaaagcccggttctaacgtcgtc
ctgagcacccaagccgccactcagggctcgcagttccagcaggccctgttcaagcagcaa
gcggcgccgcagtctgggaagcccctcagcttgcatctgttgaaccagcagggcagcatc
gtcatcccgtcccagacagtcctgcagagccagaaccaccagttcctgctgccccagctg
caggcaggaggccagatcctgacccaacacccaggcggccacatcatcacgagccagggc
cccggcggacagctcatcgccaaccagatcctaaccgccaaccagaacatcaatctgggt
caggtgttaacgtcgcaggggcaccccggcgccacccacatcctgtccggacccattcag
ctgcagcccggtcagatgggcacgccgacgcttttccagatgccggtcgcctctttggct
cagagtcaaagccagacgcagacgtcggccgcctcgggccacgcccagacggtgatccag
ggcctccagaactccttgaccatggtgggtcaggtggaggggctgagcccggccatcagt
ctgcagacgaccctgcaggcccagccgggcgccgtgcccagcgccgcaggaggccagacc
gcggaggctgctgttaccatgctgggaggctccgtagaaccggcgccgcagcttttgccg
cagtcgtcgctccttgccgtgcagcctgtgtcgtctgccgccgcttcctcctctccgtcc
atgtctgtctcaacgtcgtcctccgtgacggccgtggggctggtcccccagcaggctcag
agcagcccagggaggctgctgttcaccaaccaggggtccagcatgatcctgagccaggag
tcgctgcagatgttcctccagcaggagcagcgccaccaaacagagaatgagtcaacccaa
tcagtgggcgtcccagcgtctgtaatcgtcagcagcaacagcgtcactactgcggccccc
gctgtccatgacagccagttaactgactcctggctgggtcagagccacagcccttcccct
ggcccctcccacatgacagcagtggtaaaggttccctccggtggagctcagcaggctctg
aagatccagggcatgtcctcctcgccggcgttgacctcccacgccacgacgcctccggtg
gcggaaagcccgcagccttcccagtctcccctgactctgacccagcagatccagtctcct
caccatcaacagccgccgcagtcgcgcccttcctctcagccgcagactccctcgcgctcc
tgcacgccgtcgtcccacacccagctcttcatcgtccacaaccagatcgcagaatctccc
aaacccgctgccacctccgccgcgcaggctcagctgcaacagacgccgccccagcaggtg
cacgttcaggtccagcaccaacctctgcctcgaccggcctcacagcccacgccctaccag
caggaaatgcctcccatgtcgcagtcgcccaagcctctacctgctgctgctgctgctgct
gctgctccacctgcgctgcaccagtttgcagcacctcctgttagcgcctgcgctccagcc
gtagtgaaagcccaagttcccctccagggcctcacagctgggcagcagcatcacctgcag
ttagtaggagcacaaatccagactctgtcctccatcactcagccctcgcctcagcataaa
cagctgctggagaagctgcagcaggtcaagcagaacatcatgctacaagcaaagcctcaa
cctcaagccacgagtcagttcaattcgcagcaagacgtgcctgttgacaaggtggtgatg
acatcatcagcgggctctgactcacctgctcagcttcccacgatgctgcagccgacctcg
gtgctcgtcaaaaccgccgctgcaggatcaagtgacttacaggtattctcaggagcagca
gggcaagctgctgctgcagcaacggggaatcagacggtcactcttgccagccttacccag
cctgcacaggttcagccaaagccaggagtgatcagctcggtgggggggatgactctggga
aaagcagcaatgaagatccaggtgctggggcccgctctgacccagatgctggttccgcag
ccgcagcctcctctgcagactcagctcacatcacagacgccaccagtaaaaatgccttta
agcaccgagcccagtaaagaagccaggatgctggagcagctaagaaaacatcagggttca
gtgcttcaccccaactacagcgctcctttccactcgtttgacgacactctgcacagactg
ctgccttaccatctctaccagggaacagccaactcctctcaagactatcagagagtggat
gatgagtttgagagagtctcctgccagctgctcaagcgaacccaggccatgctggataaa
tatcggtacctgctcttcacagagtcaaaacagagactgggcccgtcggcagagatggtg
atgatcgaccggatgttcatccaggaggaaaaggtcgccctgaaccaggacaggattctg
gccaaggagagaccggaggagtttgcagcgaccgtgcggatgctggagagcggcgttcca
tcccagccaaaaccagcgcctccggatctgccgtcagcgagtccggcggcctccaccgct
gctcctgctttgataccgtctcccgctcctctcctcaaggtcgctccgactcctcctcct
gctcctcctgctccccctgctcctgcgtctcccacgcctcctcctgcccccaccatcccc
tccagttcccccttccctcccaccaagctggttataaagcacggcggcggcagcgcctcc
gtgtcctggtccagcagctgtcctccggcgccggcggccaagccggttgctccggcggcg
ccctcctcctcttcgtcgtcatcgtcggcgctaaattcccagtcggcggcggatgacgac
gacgctcttccacagcgaaccagcaagccgcccatcaagacgtacgaggcgcgcagccgg
atcggcctgaagctgaagatcaagcaggaccagaccgggttcagcaaggtggtccacaac
accgccctggatcccgtccacgccccccaacctcgctccacccaggagccgccgccggag
cccgcaaagtcccagcacctagccacgccccccaacaccgtcatcaggactcagtccccg
acggcgtcggtcactcccactcagagcaacctcagaaacgctcctccgtcgtcgtcaacg
acaacgcagatgaacggctcgttggaccaccacccggtcaaacacaacccggctgcgtca
caaaccacctgccgcctgccgcttagaaagacctacagggagaacatcagtccccgggtc
cggcccggcgtccccggcggactggacgaaagcttttcctaccccatcaccacgccgtcg
ccgccgcggcacgaggcatccaccccgccatcggaacggaccgtcatagcgagcgtacgg
gtggagaagcgagacagggaggcggacccgagtcttgaaggcggacgcttggggaacacg
atggacaaaatgaacgaggtgttcaaccggagcgtgaagacggcgacccaccaccatctt
tctctgctgctggaccgcgaggcggcgaaggagagggaggacgagcacacggaccaagac
gctgacaagtataaacggtttagcgggaaaaacaaacacaggactggcgggacgttcaga
atggaccagcacgcgcccggaccgccgtccccggagtcgtcgttcgcccgagactctctg
cttcccgccaaacgctgcaagtcggactcgcccgacatggacaacgccagcttctccagc
ggcagcccgccagacgactcactcaacgaacatctgcagtgcgccatcgacagcatcctc
aacctgcagcaggagcccgccgtgcgcggacaccacgtccgggccggcgccggcagcagg
tcgcaccaacaccaaagtcagcgcccgggagactcggcggtctccacacacagagttccg
cccccgacggcgccgtctgctccgtcgtcgtcctcgctgggccctcaggtcggagggcgg
ggccacaacggcagcctggtcccccagactcagagcagataa
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