Gambusia affinis (western mosquitofish): 122832627
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Entry
122832627 CDS
T07758
Symbol
dscamb
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122832627 (dscamb)
Cell adhesion molecules [BR:
gaf04515
]
Immunoglobulin superfamily
DSCAM family
122832627 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Sp38
C2-set_3
fn3_2
Interfer-bind
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
122832627
NCBI-ProteinID:
XP_043975505
LinkDB
All DBs
Position
LG06:complement(14808456..14931930)
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AA seq
2075 aa
AA seq
DB search
MWILAFIFLQSILNVFGEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGASPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAMRGSVAVFKCIIPTSVEAYVSVVSWEKDTVSLSSGQRYLITSTGA
LYIVDVLPEDGLNNYRCTTRHRYTGESRQSNSARLIVSDPTNAEPAILDGFDHKEVKINH
RVELPCKASGFPTPKYRWLKDNSPLEPDSRFRQTISGLLIENAQPSDSGTYVCEVWNSYG
NAEVMGRMYVKQPLKAMVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNV
RFTGLNRENIIIEGMTKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKILSSFSEKVVNP
NEPLFLVCNVKGTPPPRCSWSLDDDPVIKDAHHHLGHYETHEGHVVSQLNVTHTQVADGG
LYRCTCSNSAGVVYHQARINVRGRASIRPMKNITAIAGRDAFVHCRVIGYPYYSIKWYKN
SVLLPFNHRQRAFENNGTLKLSNVQQVDAGEYNCKVMVQPNKMESQSVHVQVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIPASLGVTVDNIDFTSSLRINNLTP
DHNGNYTCIARNEAAVVEHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPQFQPILLNSGSRIQLLSNGSLLIKHVLEDDSGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATQGEEKRMSCIAHGEKPIMVRWEKEERIINPETSRYVVTV
KEVADEVISTLVIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIR
MVAKNIIGNSNPSNELTITTDEAAPDGPPQDVTLESTSPQSIKVSWKTPQKHLQNGVIRG
YQVGYREYSPGGSHQFTIISVDSTGDTTESIVLDNLKKFTQYSVVVQAANRAGTGPSSQQ
VVAKTLEDVPSRPPENVLAVAKSPEVISLSWMSLPREALNGNLQGYRVIYWANLPDGELG
EIRNVTTDQPSLELNGLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPGPPAGVKAA
ANSSSAVFVSWLPPFKLNGIIRKYIVFCSNLHPMVMSEFEASPDKYFYMIPNLVRNRQYS
VWVVAVTAAGHGNNSEKITVEPLAKAPARILTFNGTVTTPWMKDIVLPCKAVGDPPPTIK
WLKGNTNGTPTPVIVDGRRSVQGNGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQ
VPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYR
LENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKEHEIFTSINSSRARLNLA
GWNNGGCPITSFILEYRAVDSATWTTAQRTSLTKSYILYDLQEATWYELQMKVTNSAGSA
EKRVTFATLNADGSTIPPLLKTGDPISDNMSGSGGLKMVVTITSVLVVAVLVFIMLMVLK
RRRREQRLKRLRDAKSLAEMLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMET
IDDRSTVLLTDNDFGETNKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSESHHHPTA
RRTAKAGPAAARSRYASQWTLNRPHPTSSSHTLTTDWRLPTPRAAGSVDKESDSYSVSPS
QDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGT
NDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPGGELVHLPPYLRMDFL
LNRGVPLPARGGGVSSSSGSSSSGGGGAGAAGPSGGGAGAAGESRGGGGAMGQACLEPQR
SRTLKRPPPMEPTPMEVPSPREVQQWQPGTASTLPHRDVRERGEARGEVRGEAPPSGDLA
QAQAAKLSTSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatcttcctccagagcatcttgaatgttttcggcgaagattta
cattccagcctatactttgtcaatgcatctctgcaagaggtagtatttgccagcacaacg
gggacttcggttccctgtcctgctgggggagcgtcgcccgcttcgctgcggtggtatttg
gctaccggcgaggagatctatgatgtcccgggcatccgccatgtccatcctaatggaact
cttcaaatcttcaacttcctgccatccagcttcagcaagctgatccatgacaacacatat
tactgcactgccgagaatccttctggcaagatcaggagccaggatgtccacatcaaagct
gtttcacgggaaccctacacagtcagagtggctgaccagaaggctatgcgaggcagtgtg
gccgtcttcaagtgcattatccccacttctgtggaggcctatgtctctgtcgtatcatgg
gagaaagacacagtttcactcagctcaggacaaagatatctcatcacatctacgggagcc
ttgtacattgtggacgtcctgcctgaggatggcctaaataactaccgctgcacaacacgc
caccggtacaccggtgagtcacggcagagcaacagcgcacgtctcattgtgtcagacccc
accaacgctgagccggccatcttggatggctttgaccacaaagaggtgaagattaatcat
cgagtggagcttccctgtaaggcctcaggcttccccacacccaaataccgctggctgaag
gacaacagccccttggagccagacagtcgctttcgccagactatctcagggttgctcata
gagaatgcacagcccagtgactcgggaacgtatgtatgtgaagtttggaacagctatggc
aacgcagaggtcatgggacgcatgtatgttaagcagcccttgaaggcaatggtcagtcct
cgaaaagtgaaaggcagtgtgggtagcaaggtgtctctgtcttgtagcgtgagcggttcc
gatgaatatgagctgtcttggtatcgcaacggagagatcatctaccctggaaacaatgtt
cgctttacagggcttaaccgggagaacattatcatcgagggaatgacaaaaagtgatggc
ggagcttatcagtgctttgccaggaagggcaagatgtcggcacaagacttcgtacaggtt
atccttgaagacgggaccccaaaaatcttatcctctttcagcgagaaggtggtgaacccc
aatgaacccctgttcctagtctgcaacgtgaagggaacgccgcctcccaggtgcagctgg
tcgctggatgatgaccccgtcatcaaagatgcccatcaccacctgggccattatgagacc
catgagggccacgtggttagccagctcaacgtgacccacactcaggtggcggatggcggg
ttgtatcggtgcacgtgcagcaactcggccggggtcgtgtaccaccaggctcgaataaac
gtaagaggccgagcaagcatccgcccaatgaaaaacatcacagcgattgcaggacgggac
gcctttgttcactgccgtgtgattggctacccttactactccataaagtggtacaaaaac
tcagttttgctcccgttcaatcaccgacagcgagcttttgagaataacggtaccttgaag
ttgagcaacgtgcagcaggtggatgctggggagtacaactgcaaggtgatggttcagccc
aacaagatggaatcccaaagtgtccatgttcaggttagagtccctccatacatccagccc
ttcgagttccagcgcttcactatcggtcagcgtgtgttcataccttgcgtggtcatgtcg
ggcgaccggccgctggatatcacctggcagaaagatggacggcccatccctgccagcttg
ggtgtgactgtcgacaacatcgatttcaccagctcactgcgaataaacaacctgacacct
gaccacaacggcaactacacctgcatcgcccgaaacgaggccgctgttgtggagcatcag
agtcagcttattgttcgagttccacctcagtttgtggttcagcctgaggatcaagatggg
atctacgggaaaactgtgacccttaactgctctgctgaagggtatccaccacccactatt
gtttgggaacactccaaaggtgccggcgtcccccagtttcagcccatccttctgaacagc
ggctctcgaatccagctgctgagcaacggctcgctgcttatcaaacatgttctggaggac
gacagtggcttctacctgtgtaaggtcagcaacgacgtcggagctgatgtcagcaagtcc
atgtacctcaccgtcaaaataccagccatgatcacctcctacccgaacaccactctggcc
acacaaggcgaggagaagaggatgagctgcatcgctcacggggagaaacccatcatggtg
cgctgggagaaagaggagcgaatcatcaaccccgagaccagccgatacgtggttactgtc
aaggaggtggctgacgaagtcatctcaacactggtgatcatgccaactgttcgtgaggac
tcagggttcttctcctgtcatgccatcaactccttcggcgaggacagaggcatcatacag
ctgacagtgcaagaaccacctgatcctccagaggtggagatccgggaggtgaaagatcga
accatagctctccgctggaccatggggtttgatggcaacagtcctatcacaggatatgat
attgagtgcaagaacaaatcagcttcttggttgtcagcccaggtaaccaaagatgtgtca
ccacagcttaaccaagccactattatagacctccatccttcctccacctacaacatccgc
atggttgccaagaacattattggcaacagcaaccccagcaacgaactcaccatcactact
gatgaagcagctcctgacggccctccacaagatgtcactctggagtccacgtccccacag
agcatcaaagtgtcttggaagactccccagaaacatctgcagaacggcgtgattcgcggc
taccaggtgggctacagggagtacagtcctggtgggagtcaccagtttactattatcagc
gtggattcgacaggagacaccacagagagcatcgtgttggacaacctgaagaagttcact
cagtacagtgtggtggtccaggctgcaaacagagctggaacaggaccgtcttcacagcag
gtggtagccaagaccctggaggatgtgccgtctcgacctcctgaaaacgtcttggcagtg
gccaaatctccagaggtgatttcactgtcctggatgtctctgcccagagaagctctcaat
gggaacctgcagggctacagagtaatctactgggccaacctgcctgatggagaactgggg
gaaattaggaatgtgacaaccgatcagccgtctctggagctgaatggtttggagaagtac
accaactacagcatccaggtcttagccttcactaacgccggagacggagtccgcagtgaa
cagatttatgttcgcaccaaagaggatgttcctggtccaccagcaggagtgaaggctgcg
gccaacagcagctcggctgtgtttgtctcctggctgcctccatttaaacttaatgggatc
atcaggaaatatatcgtcttctgctctaacctgcatcccatggtgatgagtgagtttgag
gcttctcccgataaatatttttacatgatcccaaatttggttcgaaacagacagtacagc
gtctgggtggtggcagtgactgctgcggggcatggcaacaacagtgagaagatcacagta
gagcctctggccaaagctccagctaggattctgacgtttaatggcacagtcaccaccccc
tggatgaaggacattgttttaccttgcaaagctgtcggggaccctcctcccaccatcaag
tggctcaagggaaacacaaatgggacaccaacacctgttattgtggatggtcgccgtagc
gtccaggggaacgggagcttcattatccgcacagtgaaagcagaggactctgggaactac
agttgtgtggccagtaacaactgggggtcagatgagatcacactgaacctgcaggtccaa
gtaccccctgaccagccacgtctgacagttaccaagactaccaccacatcaatcacgttg
tcatggatacctggagacaacggcgggagctctatcagaggttacattctgcagtactca
gaggacaacagtgaacaatggggcagttttcccatcagccccagtgagcgatcatatcgt
ctggagaacctgaagtgtggcacatggtacaaattcaccctgacggcccagaacgccgtg
ggcccaggacgcatcagcgagatcattgaagcgaaaacccacggaaaagaaccacaattt
gccaaagaacatgaaatcttcaccagcatcaactccagccgggccaggctcaacctggct
ggctggaacaatggcggctgtccaatcacctccttcatactggaataccgcgcggtggat
tcagccacgtggacaacagcccagcgcacctcgctcaccaagagttacatcctgtacgac
ctgcaggaggcgacatggtatgagctgcagatgaaggtcaccaacagcgccggctcagcg
gagaaacgggtcacctttgctactctaaatgccgatggaagtaccatccctcctctgctg
aagacaggagatcccatttcagacaacatgtcaggcagcggaggactgaagatggtggtg
accatcacctccgttctagtcgtggctgtgctggtttttataatgctaatggtgctaaag
aggagacggagggagcaaaggctcaaaagactcagagatgccaaaagcctggcggaaatg
ctgatgagtaaaaacacacggacgccagacacggtgaacaagcagcagcagacactgaga
atgcacattgacatccccagagcgcagctcctcattgaagagcgggacacgatggaaaca
atcgacgacaggtccactgtgctgctgacagacaatgattttggggagaccaataagcag
aagtcttccacggtgacccacacagtccactaccagtctctgtcccaggccactgggccc
ctggtggacgtttccgatgccaggcctggaaccagtgagtcccaccaccaccccactgcc
agacgcactgccaaagctggacctgctgcagcacggagccgctacgccagccagtggact
ctgaaccggccgcatcccaccagctcctcacacaccctgaccactgactggagactcccc
acgccgcgcgccgctggatctgtggacaaagagagtgacagctacagcgtcagcccctca
caggacacagatcgcgcacggagcagcatggtctcaacagagagtgcatcttccacctac
gaagagctggccagagcctatgagcacgccaagatggaggagcagctccgtcatgcaaag
ttcaccatcacagagtgcttcatctctgacacgtcgtccgagcagatgacagcagggacc
aacgactacactgacagcctgacctccagcacaccatcggagtcgggcatctgccgcttc
accgcttccccgcccaaacctcaggatgttagcagggtcatgaacatggccgtgcccaag
gcgcacagaccaggaggagagttggtccacttacctccgtacctccgtatggacttcctg
ttgaaccgtggcgtgcctctgccagcccgaggagggggcgtcagcagcagtagtggcagc
agtagcagcgggggaggcggtgcaggagctgcaggaccgagcggaggtggtgctggtgct
gccggggaatcaagaggaggcggaggagccatgggccaggcctgccttgaaccccagagg
agtcgtaccctaaagaggcctcctccgatggagcccacacccatggaagtgccctctccc
agggaggtgcaacagtggcagccaggaactgcctctacccttccacacagggatgtccgg
gagaggggggaggcccggggcgaggtccgaggagaggcgcccccctcaggagatttagcc
caagcacaggctgccaagctcagcacctcacaggagtcactgctggattccagaggacac
ctgaaacagagcaacaacccttatgccaagtcttacactctggtataa
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