Gambusia affinis (western mosquitofish): 122832683
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Entry
122832683 CDS
T07758
Name
(RefSeq) coatomer subunit beta'-like
KO
K17302
coatomer subunit beta'
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122832683
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122832683
Membrane trafficking [BR:
gaf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122832683
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122832683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
122832683
NCBI-ProteinID:
XP_043975613
LinkDB
All DBs
Position
LG06:complement(9080972..9091491)
Genome browser
AA seq
1190 aa
AA seq
DB search
MPLRLDIQRRLTARSERVKSADLHPTEPWMVLSLYTGTVVVWNHETQAIVKSFELCDLPV
RVAKFVARKHWIITGADDMQIRVFNYNTLERVFMFEAHCDYIRCVAVHPTQPFVLTCSDD
MLIKLWDWDRKWTCCQVFEGHAHYVMQVVFNPKDNNQFASASLDRTIKVWQLGSKSPNFT
LEGHEKGVNCIDYYNGGDKPYLVSGADDNMIKIWDYQNKTCVQTLESHVQNVTCVCFHPE
LPVILTGSEDGTVRVWHSNTYRLENTLNYGMERVWYICGQSGSNNIALGYDEGSIIIKLG
REEPAMSMDSSGKIMWAHHSEVQQANLKTLGELEVQDGEKLPLGAKDMGSCEIYPQTIQH
SPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSQYATREGNSVVKIFKNFKE
KKTFNPDFGADGIFGGFLLGVRSTSGLAFYDWESSSLIRRVEILPKHIFWSDSGELVCIA
TEESFFVLRYLTERVSAAQESKETLTEDGIEDAFEVLGEVQEVVKTGLWVGDCFIYTSSL
NRLKYYVGGEIITIAHLDRTMYLLGYIPKDDRLYLGDKELNIISYSLLLSVLEYETAVMR
KDFTTADRVLPTIPMEQRTRVAHFLEKQGFRQQALAVSTDLEHKFELALQLGELRMAYEL
ALEAESEHKWKQLAELASTKGQFSLAQECLHQAQDYGGLLLLATTSGSAEMVGKLAEGAE
KDGKTNVAFLTYFMQGRTDKCLELLIKTDRLPEAAFLARTYMPSQVSRVVKLWKENMSKV
NQKAADALADPDQYSNLFPGLQQALLAEQYLKETHVGVRPAAEYPLVMSNENRDVLEESK
GFTTRGEITEPGEAEGSMNESPAASSEATVMEEPFPMKHEPPADPVPVTEKIFSFPEEAP
LSVFATKDHAEPNQAQSECRVKEENIMKSETLLIAEGRLIQKPCTEIPAIDSEAVQSSPV
EGVGLSDEVTDQGVASAAEAQPAITVSEEEETQTADDVLINADLKANSVTASESATLEET
SSPEQQETDTIPLVAIATEETSIAKLPVAVEEPVSLEPTERSLLDVLSATGQAFSDLILD
SSLDSDKDVSAALKPVAVWEDEQEQEEKTAEPPAETEDESEVARLPEAEPEGSHDTAEAK
VAEQEAGSEGSRDLAEELEETINHEDLDDLDLDSFELEEIETLDTNLLDE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgccactgaggttggacatccagcggaggctgacagctcggtcagagagagtgaagagc
gcggacctgcaccccactgagccgtggatggtgctcagcctctacactggcactgttgtc
gtctggaaccatgaaacacaggcaattgttaaatcatttgagctgtgtgatctgcctgtt
agagtggccaagtttgtagccaggaaacactggatcattactggagcagatgacatgcag
atccgtgtgttcaactacaacacactagaaagggtcttcatgtttgaagcccactgtgac
tacatccgctgcgtcgctgtgcaccccacccagccctttgtccttacctgcagcgatgac
atgctgatcaaactgtgggactgggacagaaagtggacgtgctgtcaagtgtttgaggga
catgcacactatgtcatgcaggttgtcttcaaccctaaagacaacaaccagtttgccagt
gcctctctagacagaaccattaaggtgtggcagttgggctccaagtctcccaatttcact
cttgaaggtcacgagaaaggagtgaactgcattgattactataatggaggagacaagccc
taccttgtatcaggagcagacgataatatgataaagatctgggattatcagaacaaaacg
tgtgttcagaccttggagagtcatgtgcagaatgtgacctgtgtctgcttccaccctgaa
ctgccagtcattctcacaggatctgaggacggcactgtcagagtttggcactccaacacc
tatcgacttgaaaacacacttaattacgggatggaacgagtgtggtatatatgtgggcag
tctggctccaacaatatagctctgggctatgatgaaggcagcatcatcattaagctgggt
cgggaggagccggccatgtccatggactccagtgggaaaatcatgtgggcccatcactct
gaggtgcagcaggccaacctgaagacgctgggagagttggaggttcaggatggagagaag
ctcccgcttggtgccaaagacatgggcagctgtgagatttacccacaaaccattcaacac
agccccaatggcagatttgtagtggtgtgcggagatggggaatatatcatctacaccgcg
atggccttgaggaacaaaagctttggctctgctcaggagtttgtctgggcacacgactcc
tcacagtatgccacgagggagggcaatagcgtggtgaaaatatttaaaaactttaaagag
aagaagactttcaaccctgattttggggctgatggcatctttggtggcttcttactggga
gtgaggtcaaccagcggactggctttctatgactgggaaagctccagtttgatccgccgt
gttgagatcctgcctaagcatatattctggtctgactctggagagctggtgtgtattgct
acagaagagtccttctttgtgttgcgctacctgacagagcgagtgtcagcagcacaggag
tctaaagaaacgctgacagaggatgggatagaagatgcttttgaggtactgggtgaggtc
caggaggttgtaaagacgggtctctgggtcggagactgcttcatctataccagctccttg
aacagactcaaatactatgttggaggagagatcataactattgctcacctggacaggacc
atgtatctgctgggctacatcccaaaagacgaccgtctctatctaggagacaaggagctc
aacatcatcagttactctttgctgctgtctgtgctggaatatgagacagctgtcatgagg
aaagatttcaccacggctgacagggtccttcccacaataccaatggagcagaggaccagg
gtcgcccacttcctggagaaacagggcttcagacagcaggcgctggctgtgtctactgac
ctggaacacaagtttgagcttgctctgcagctgggggagctgaggatggcgtatgaactg
gcactcgaggcagagtctgagcataaatggaagcagttggctgaactcgcctctacaaag
gggcagttcagcctggctcaggaatgtctgcaccaagctcaggattacggtggattactt
ctgctggcaaccacctcaggcagcgcagagatggtagggaaactggccgagggagcggag
aaggatgggaagaccaacgtggccttcctcacctacttcatgcaaggaagaactgacaaa
tgtttggagctgcttattaaaactgatcgattgccagaggctgctttcctggcaagaaca
tacatgcccagccaagtctcaagggtggtgaagctgtggaaggagaacatgtccaaggtt
aaccagaaggcagcagatgcgctggctgacccagatcagtacagcaacttgttccctggc
ctccagcaagctctgctggctgagcagtacctgaaggagactcatgttggggtcagacct
gctgcagaataccccctcgtcatgtcaaacgagaaccgtgatgttctggaggagtcgaaa
ggttttaccaccagaggagagattactgagccaggggaggcagagggaagcatgaatgaa
agccctgctgcatcttcagaagcaacggtaatggaagaaccctttccaatgaaacatgag
cctcctgctgatcctgttccggtgacagagaaaatatttagttttccagaggaagctcct
ctgtctgtctttgccactaaagaccatgctgagccaaaccaagcacagtctgagtgtcga
gttaaagaggaaaacattatgaaatcagagactttacttattgcagagggacgcttgatc
cagaaaccctgcactgagattcctgccatagactcggaagccgtacagtccagtccagtg
gaaggtgtaggtttatctgatgaggtgactgatcagggcgtagcttcagcagctgaagct
cagccagctatcacggtgtctgaagaggaagaaacacaaacagcagatgatgtgctaatt
aacgcggatctaaaagccaattctgtaactgcatcagaatctgcaacattagaggaaaca
tccagccctgaacaacaggaaacagacaccattcccttggttgctatagcaacagaagaa
acttcaattgcgaagctacctgtagcagtagaggagcccgtctctttagaaccaacagaa
cgttccctgctggatgttctatcagccacaggccaggcattctcagatctgattctcgat
tcatcgctagactcagataaagatgtatcagcggcgttgaagcctgtcgctgtgtgggag
gatgagcaagaacaagaggagaaaactgcagaacctccagcagagacggaggatgagtcg
gaagtggccagacttcctgaggctgaaccagaaggttcacacgacacagcagaggcgaag
gtggcagagcaggaagcaggctctgaaggatcacgggacctagcagaagaactcgaggaa
acaatcaaccatgaggaccttgatgatctggatctggacagttttgaactggaggaaatt
gaaacattggacacgaatctgctggatgaatag
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integrated database retrieval system
