Gambusia affinis (western mosquitofish): 122832686
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Entry
122832686 CDS
T07758
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122832686 (vps53)
Membrane trafficking [BR:
gaf04131
]
Protein recycling
Others
EARP complex
122832686 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
122832686 (vps53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Laminin_II
VPS51_Exo84_N
GrpE
Syndetin_C
FBF1
NBD94
Sec8_N
Motif
Other DBs
NCBI-GeneID:
122832686
NCBI-ProteinID:
XP_043975623
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Position
LG06:19091718..19130312
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AA seq
832 aa
AA seq
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MMEEEEFEFTEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDDIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPAQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITKVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDKPGQQKRPDSPLDQTNPFLEDDPGEDVGSEKDEDLAKPRKPKAPDNPFHGI
ISKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGGLTITSLLKEKEGYE
AAKFNVDELCLICSILGTAEYCLATTQQLEEKLKEKVDKVLVERINLTGEMDTFSTVISN
SIQLLVQDLDAACDPALSAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTR
KYFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRK
APASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKR
SEQSSMLELFRQRLPTPPSGSDSGPSLSFSAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaagaatttgaatttaccgaagatttagaggcaattttgcatctaact
ccggaggtgcaactagccattgaacaggttttccccagccaggaccctctggacagagca
gacttcaatgctgtggagtacatcaacacactcttccccaccgagcagtctttggcgaat
atcgatgatgttgtaaataaaattcgactgaagataaggcgtcttgacgatgatatcagg
acggtagtgagaggtcagaccaacgtgggacaggacggcagacaggctttggaagaggcc
cagatagccatccagcaactctttggcaaaatcaaagacattaaggacaaggcagagaag
tcggaacaaatggttaaggagataacgagggacatcaagcagttggatcatgccaagcgc
caccttactacttccataaccaccctcaaccacctgcacatgttggcggggggtgtcgac
tctttagaagccatgaccagaaagcggcagtatggagaggtggccaacttgctgcaggga
gtggttaatgtgcttgaacacttccaaaaatacatgggcataccccagatcaggcagctt
tcagagagagtgaaggcagcacagagtgagctggggactcagattctggcagattttgaa
gaagcctttcctgctcaaggctccaagagacccggtggacccagtaatgtcctcagagat
gcctgcctggtggcaaatgtactcgacccgcgcatcaaacaggagattatcaaaaaattt
atcaggcagcacctctcggagtatctggttctcttccaggaaaatcaagatgtcgcctgg
ctggataagattgatcgccgctatgcttggatcaagcgacagcttgtagactacgaggaa
aaatatggtcgcatgtttcctgaagagtggtgcatgacggagcgaatcgctgtggagttc
tgccacatcaccaaggtggaactagccaaggtgatgcgaacccgggcaaaggaaattgaa
gtgaaactgcttctgttcgctatccagaggacgacaaactttgagggtttgctggccaag
cgcttcacaggatgcaccttaacggataaacctgggcagcagaagagaccagatagccca
ctagatcaaactaacccatttttagaggacgatccgggagaagatgtgggatcagaaaag
gatgaagatcttgctaagccgaggaagcccaaagctcccgacaatccattccatggcatt
atctccaagtgttttgagcctcatctctacgtctacattgagtcccaagacaagaacctt
ggggaattgattgaccgttttgtggctgatttccgagcacaaggcccacccaaggcaggg
accgaggagggtggcgcagtgctgcccagctgtgccgacctcttcgtttactacaagaag
tgcatggtccagtgttcccaactgagcacaggcgaacccatgatcgccctcacaacaatc
ttccagaagttcctcagagagtacgcctggaaaatcctttctggcaacttgccaaaatcc
agcagtaacagcgggggtctcaccatcaccagcctgctgaaggaaaaagaaggctatgag
gcagcgaagttcaatgtcgatgagctctgcctgatctgcagcatccttggtactgcagaa
tactgtctggctaccacacaacagctggaggagaagctgaaggaaaaagtagataaggtc
ctggtggagagaataaatctgaccggggagatggacactttcagcactgtgatctcaaac
agtatccagctgctggttcaggatctcgatgctgcctgcgatcccgctctgagtgctatg
agcaagatgccgtggcagagtgtggagcatgtgggtgaccagagtccttacgtcacatca
atcatcatgcacattaagcaaaacgtgcccatcatcagagacaaccttgcctcaactcga
aaatacttcacacagttttgcatcaaatttacaaactctttcattcctaaatttattaac
cacttgttcagatgtaagcctatcagcatggtgggagccgagcagctcctcctggataca
cactccctgaagacagttttgttggatcttccatccataggctcccaggtcctcagaaag
gcacctgccagttataccaagattgtagtgaaaggcatgacgcgtgcagagatgatactt
aaggtggtgatggccccacacgaaccaccagtggtgtttgttgataactacatcaaactt
ttggctgatgggaacccagagaccttccaaaagattttggatatgaagggtctgaagcgc
agcgaacaaagcagcatgctggagctcttcaggcagaggttacccactccaccctcggga
tctgacagcggcccatccctgtccttcagtgcccccaccccagagcaagagtcgtctcgt
atccgcaagctggagaagctcatcaaaaagagactgtga
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