Gambusia affinis (western mosquitofish): 122832761 Help Entry 122832761         CDS       T07758                                  Symbol col4a3 Name (RefSeq) collagen alpha-1(I) chain   KO K06237   collagen type IV alpha Organism gaf  Gambusia affinis (western mosquitofish) Pathway gaf04510   Focal adhesion gaf04512   ECM-receptor interaction gaf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gaf00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122832761 (col4a3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     122832761 (col4a3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     122832761 (col4a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:gaf04147]     122832761 (col4a3)    00536 Glycosaminoglycan binding proteins [BR:gaf00536]     122832761 (col4a3) Exosome [BR:gaf04147]  Exosomal proteins   Exosomal proteins of other cancer cells    122832761 (col4a3) Glycosaminoglycan binding proteins [BR:gaf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122832761 (col4a3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  122832761 NCBI-ProteinID:  XP_043975762 LinkDB All DBs Position LG06:1478735..1508678 Genome browser AA seq 1729 aa AA seqDB search MEPVFNRQGGGEVGAQWEVWSGASLHCCWGFTFPILTGSLRGEPTQAGAPSREVRCSLPT WMASPAAVRRRIPRLLVRLLGLGALLLLADGKLVCHCTGKSRCHCDGVKGQKGEAGYPGD PGLPGVMGFPGREGHLGSAGEKGNPGNAGGRGIKGSRGPPGTPGFPGPPGLPGLPGHEGP MGRPGLPGCNGTKGEAGYRGVPGPSGPPGPRGPPGPQGMKGDSVMIPFSQEIEGAAGPQG PPGRKGQSGDGGEPGAPGRPGDHGLPGRRGPAGIEGEKGQEGSSPTSPGPQGRKGDRGPP GIPGKQGIKLYVEAPKELKGEPGEAGQKGFPGLPGEPGSPGVKGEKGDRGEPGSLGKPGK KGLLGELGQRGDPGDFGSIGPPGIDGAAGEKGDRGPPGPPGQTIFNHKFVKGRRGFPGPL GPTGFPGIQGPIGFPGLKGESGEASNGPPGSPGPTGSGGPKGEPGLPGLVVTGPPGLTGV PGPFGLQGEPGEPGIPDMKMTGQGVPGSKGFRGPPGDKGAVGQKGQKGEVCTDCDFQPGP PGPPGPPGPPGQDRLPGAAGPPGPAGDKGFKGAAGPPGEQGSRGPVGPQGPPGPAGEPGL TPWLGQKGAAGDRGDKGQRGDAGQPGFPGPPGPKGETGQKGNPGRVGSKGHRGAAGPLGA RGATGPPGPPGYSHPGRSGPAGPKGANGYMGDVGAPGPKGEKGSMGNIQNIPGDPGPKGF RGRRGETGPGGENGPAGRRGPPGPKGQKGSDGYSYKGNRGNSGSKGDKGSRGEPGFPCYG MKGPAGPPGHPGPVGPKGHRGFGLPGEAGKPGPRGEDGCDGPPGHPGPSGRLGDPGPAGQ DGRPGPKGHRGVDGEPGSTGPPGPRVPGPPGPPGPRGPVGPIGPTGTRGPTGLKGDPGTL CSRVPGATGPPGPPGPDGGPGPAGEVGPKGRRGNPGEPGGPGPRGYMGVPGPMGCPGNDG PPGTCGEPGPKGQKGRDGSVGSQGPTGEPGDKGATGPRGFPTVISTTGDPGDPGFPGPRG PTGEKGQGGPPGNQGPKGLDGKPGGPGPPGHPGDPGRDGERGPRGGSGPPGDKGCTGRPG DPGEKGATGANGPPGSDGGSGKPGDKGRKGEPGFGRGGKGCRGTKGIPGPPGPSGPKGSG GPAGDVGPLGPCGPCGSVGPKGPPGSKGSPGRAGEKGLDGLPGNCGPPGPPGNPGCQGLP GAPGPLGPKGNQGRDGIPGPNGEKGDVGSCLPGPKGPTGGRGPPGCVGDRGPPGCCGPPG PSGPAGDPGCQGAKGPPGPPGCAGKPGGQCIDGTKGYKGFSGPQGPKGSKGPPGPPGPPG PGSKGHKGVKGEPGPSGPPGPIGDPGPYGPPGSCGPPGCPGEKGCRGRIGPQGPTGMEGD KGPPGNPGPGGPPGRIGNPGPKGKDLYFPVQPEPGDPGAEGVEGQVGGIGSPGFPGPRGA DGSKGSSGAPGWTGAPGSDGLRGEDGERGRIGRKGANGERGRVGAKGLPGEPGEPGGGAP PRRNGFLFTRHSQDSAAPACPAQSTLIFRGYSLLFINGYSRAHGQDLGTVGSCLQRFSTA PFLVCETGEECRYAERNDFSYWLSNIRSPPNQTDPEAALESKISKCSVCESEANVIAIHS QTSAVPPCPADWQSLWTGFSFVMETGVGAEGSGQPLVSPGSCLENFQGMPFMECSVGSGT CKYDNSLYSYWLAALDPDNMFRRPSSWILPGNNPDNISRCRVCMKIMQM NT seq 5190 nt NT seq  +upstreamnt  +downstreamnt atggagccagtctttaaccggcagggtggaggtgaggtgggggcgcagtgggaggtgtgg agtggggcttccctccactgctgctggggtttcactttcccaatcctcacaggatctctg agaggagaaccgacccaagccggtgctccgagccgggaggtgcgctgctctctgcccacc tggatggcgtctccggcggctgtgaggcggaggatcccccgcctgctggtccgcctgctg ggcctcggcgcgctgctgctgctggccgacggcaaactggtctgtcactgcaccgggaag tcccgctgtcactgcgacggggtcaaaggtcaaaagggagaagcaggatacccaggagac cctggacttcctggagtgatgggatttcctggaagagaaggtcacctggggtcagcagga gaaaagggtaacccgggaaacgcaggcggtcgaggaattaagggctctcggggacctcct ggaactccaggttttccaggacctccaggtctcccagggcttcctggacacgaagggcca atgggtcgacccggactcccaggatgcaacgggacaaaaggggaggccggataccgaggg gttcctggaccttcaggcccgccgggaccacgagggcccccggggccacagggcatgaag ggagactcggtcatgatccccttcagccaggaaatcgaaggagcagcgggaccacaaggg ccacccggcagaaagggccaaagtggagatggaggagaaccgggcgcaccgggtcggccc ggagaccatggacttcctggaagacgaggacctgcaggaattgaaggagaaaagggtcag gaaggttccagtccgacgagtcctggtccgcagggcaggaagggcgatcgcggcccccca gggatccccgggaagcagggcatcaagctctacgttgaagcacccaaagagctgaagggc gagccgggcgaagcggggcagaaaggtttccctggtcttcctggggagccagggagcccg ggggtgaaaggagagaagggtgacagaggagaacccggctcactgggaaaaccagggaag aagggattactgggagaactgggacagcggggcgaccccggagacttcggctccatcggc ccgcccggcatcgacggcgccgcgggagaaaaaggcgaccgaggacctccaggtccccca ggacagaccatctttaatcacaaatttgtgaagggccggcgaggtttccccgggcccctt ggacccaccgggttccccgggattcaaggtccgatcgggttcccaggactgaagggcgag tcaggtgaggcctccaacggaccgccaggttctcctggtccaactggctcaggaggtccc aaaggggaaccaggactgccgggcctggtggttaccggaccgccaggattgaccggagtg ccaggaccttttggacttcagggagagccaggagagcctggaataccagacatgaagatg acaggacagggtgttcccggttctaaaggctttcggggccctccaggggacaaaggggcg gttgggcaaaagggtcagaaaggggaggtgtgtacagactgcgattttcagcctggccct cctggacctccgggaccaccagggccgccaggtcaggacaggttgccaggtgcagctgga cctccaggaccagcaggtgataaaggcttcaaaggagccgcaggcccacctggagaacag ggctccaggggccccgtgggcccccagggccccccggggcccgcaggcgagccggggtta accccttggctggggcagaagggggcggccggggaccggggcgataaggggcagcgggga gacgcggggcagcccggcttcccaggaccgccgggccccaaaggcgaaacgggacagaaa ggaaacccggggcgcgtggggtcaaaaggtcaccggggcgcggcgggacccctcggggcc agaggagcgacggggccaccgggcccaccgggttacagccatccgggtcgttcaggaccg gcggggcccaaaggagctaacggctacatgggagatgttggagcaccgggccccaaagga gagaaaggctctatggggaacatccagaacattccaggagatccgggaccaaaaggcttc agaggacggcggggggaaaccggacctggcggtgagaacggacctgcgggtcgccgagga ccgcctggtccaaaaggtcaaaagggcagtgacggttactcttacaagggtaaccggggc aactcggggtcaaaaggagacaaggggtccagaggagagccagggttcccctgttatggc atgaagggaccagcggggccgcccggccacccggggcccgtcggcccaaagggccacaga gggtttgggctgccgggtgaggcgggtaaaccaggccctcggggggaggatggctgtgac ggacctccgggccatccgggaccgtcgggacggctgggagatccgggacctgcgggacaa gatggccgcccggggcccaaaggtcaccgaggcgttgatggggaacccggttccacgggt ccgcctgggccccgtgtccccggacctccaggacctccaggaccgcgaggtccggtcggt ccaattggacccacaggaacaagggggccgacgggtctgaagggagatccggggaccctc tgctccagagtccccggggccacagggccaccggggccaccgggacccgatggaggtcca gggccagccggggaagtgggacccaaaggccggagagggaatcctggagagcctggaggc ccggggccgagaggctacatgggtgttccagggccgatggggtgtcctggaaacgacgga ccgcctgggacctgcggggaaccgggacctaaaggtcagaagggtcgagatggttcagta ggttctcagggaccaacaggagagccaggggacaaaggagcaactggacccagagggttc ccaacagtcatcagcacaacgggggatcctggagaccctggatttccaggacccagaggt cccactggggaaaaaggacaaggaggccccccagggaaccaagggccaaagggcctggat ggaaaacctggaggcccggggccaccaggacatcctggagatccaggtagagacggagag agaggtcctcgtggtggctctgggcccccaggggacaagggatgcaccggtagaccaggt gatccaggtgaaaaaggtgcaacgggagccaacgggcccccgggttcagatggagggtcg gggaaacccggagataagggacgtaaaggagaaccaggttttggacggggaggtaaaggc tgtagaggaacgaaggggattcctggacctccaggaccttctggtccaaaaggatcagga ggaccagctggagacgttggccctctggggccctgcggtccctgtggatctgtgggaccc aaagggccgcctggatccaaaggttctcctggtagagccggtgagaaaggtttggatggc cttcctgggaactgtggccctccagggcctcctggaaatccaggatgccaggggcttcct ggagcgcctggtccactgggacccaaaggaaaccagggccgggacgggatccccgggcct aatggagagaaaggagatgtgggctcatgtctacctggacctaaggggccgacaggagga agaggtccccctggatgcgtgggggacaggggcccgccgggatgctgtgggccgcctgga ccctctgggcctgcaggagacccgggttgccaaggcgctaagggacccccagggcctcct ggatgtgctgggaagccagggggacagtgcattgatgggacgaagggatataaaggattt tctggacctcaaggaccgaaaggctccaagggtccgcccggtccgcctggtccgccaggt cctggttccaaaggccataagggcgttaaaggagaaccgggtccctctggaccaccagga ccaatcggtgaccccggtccttatggacctcctggttcttgcgggccgcctggatgtcct ggagagaaaggctgcagaggacggattggaccacaaggtccaactggtatggaaggggac aaaggaccgccaggtaacccggggccaggaggaccaccaggacgaatcgggaacccggga ccaaaagggaaggacttgtattttcctgtgcagccggaaccaggagacccaggtgcagaa ggagttgaaggccaagtgggaggaatcggatccccgggtttccctggaccgaggggagct gatggttcaaaaggctcatcaggagcaccaggttggacaggagcacctgggtctgacgga ctgagaggagaggatggagagagaggacgaatcggccggaaaggtgcgaacggagagcgt ggcagagtgggagccaagggtcttccaggtgagccaggtgagccaggcggcggcgcgcca cccaggaggaacggcttcctgttcaccagacacagccaggacagcgccgccccggcctgc ccggcccagtccacgctcatattcagaggatactcgctgctcttcatcaacggctacagc cgcgctcacggacaggacctgggaacggtgggcagctgcctgcagcgtttcagcaccgct cccttcctggtctgtgaaactggagaggaatgtcgatacgctgagagaaacgacttttcc tactggctgtccaacatcaggagcccgccaaaccagaccgacccagaggcggcgctggag tccaagatcagcaagtgttcggtgtgcgagtctgaagccaacgtgatcgccatccacagc cagaccagcgccgtcccgccctgccctgcggactggcagtcgctctggaccggattctcc tttgtgatggaaacgggcgtgggcgccgagggctcgggtcagcctctggtttctccagga tcctgcctggaaaacttccaaggaatgccgttcatggagtgcagcgtcggctcaggaacc tgcaagtacgacaactccctgtacagctactggctggctgctctggaccccgacaacatg ttcaggaggcccagcagctggatccttccagggaacaacccggacaacatcagccgctgc agggtctgcatgaagatcatgcagatgtga

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