Gambusia affinis (western mosquitofish): 122832858
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Entry
122832858 CDS
T07758
Symbol
actn4
Name
(RefSeq) alpha-actinin-4 isoform X1
KO
K05699
actinin alpha 1/4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04510
Focal adhesion
gaf04517
IgSF CAM signaling
gaf04518
Integrin signaling
gaf04519
Cadherin signaling
gaf04520
Adherens junction
gaf04530
Tight junction
gaf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122832858 (actn4)
04518 Integrin signaling
122832858 (actn4)
04519 Cadherin signaling
122832858 (actn4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122832858 (actn4)
04520 Adherens junction
122832858 (actn4)
04530 Tight junction
122832858 (actn4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122832858 (actn4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122832858 (actn4)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122832858 (actn4)
04147 Exosome [BR:
gaf04147
]
122832858 (actn4)
Membrane trafficking [BR:
gaf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122832858 (actn4)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122832858 (actn4)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122832858 (actn4)
Exosomal proteins of colorectal cancer cells
122832858 (actn4)
Exosomal proteins of bladder cancer cells
122832858 (actn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
XisI
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
122832858
NCBI-ProteinID:
XP_043975961
LinkDB
All DBs
Position
LG06:complement(2429041..2489611)
Genome browser
AA seq
898 aa
AA seq
DB search
MVDYHAANNQSSGGVQTYMEQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIEN
IEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEE
IVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWK
DGLAFNALIHRHRPDLIDYDSLRKDDPITNLNNAFEVAEKHLDIPKMLDAEDIVNTARPD
EKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQMMEDYEKLASDLLEWIRRTI
PWLENRTQEKTVKDLQAKQEDFRDYRTVHKPPKVQEKCQLEISFNTLQTKLRLSNRPAFM
PSEGRMVSDINTAWHNLEGAEKGYEEWILSEIRRLERLEHLAEKFHQKAAIHESWTDGKE
AMLTQKDYETSSLSEVKALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDAASVNT
RCQKICEQWDILGSLTHRRKESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAMEDLQD
MFIVHNIEEIQGLISAHEQFKSTLPEANKEREAIQAIQAEVQRIAQSNGIKLSSANPYTT
ITPQSIDSKWEKAMAMVPQRDNALQHELNKQNSNDTLRATFAAQANAVGAYIQAKMEEIG
RISIEMNGTLEDQLTDLKEYQKTIMSYMPEINKLEGHHQHIQEALIFDNQYTSYTMEHLR
VGWEQLLTTIARTINEVENQILTRDAKGISQEQLFEYRASFNHFDKDHSGGLKAEEFKAC
LISLGYDVENDKQGDGEFNRIMGIVDPNSTGVVTFQAFIDFMSRETTDTDTADQVIASFK
ILAGDKNFITADELRRELPPDQAEYCIARMAPYAGPDGVPGALDYMSFSTALYGESDL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatcacgctgccaacaaccagtcttccggcggagtgcagacctacatggag
caggagaacgactgggaccgggacctgctgctggacccggcctgggagaagcagcagcgg
aagacgttcacggcgtggtgcaactcccacctgaggaaagccgggacccagatcgaaaac
atcgaggaagacttcagggatggactcaaactcatgctgctgctggaggtcatctcaggc
gagcggttaccgaagccggagcgaggcaagatgagggtccacaagatcaacaacgtgaac
aaagcgctggacttcatcgccagcaagggagtcaagctggtgtccatcggagccgaggaa
atcgttgacgggaacgccaagatgactctgggaatgatctggaccatcatcctccgcttc
gccatccaggacatctctgtggaagaaacctctgctaaggagggtctcctcctgtggtgc
cagaggaaaactgcgccttacaagaacgtcaacgtgcaaaacttccacatcagctggaag
gacggcctcgccttcaacgctctgatccacagacacagacccgacctcatcgactacgac
agcctcagaaaggacgaccccatcactaacctgaacaatgccttcgaggtggctgagaag
cacctggacatccccaaaatgttggacgctgaagacatcgtgaacaccgctcgtcccgat
gagaaagccataatgacctatgtgtccagtttctaccatgccttctctggagctcagaag
gctgaaactgctgctaatcgcatctgcaaagtgctggctgtcaaccaggagaatgaacaa
atgatggaggattacgagaagctcgccagcgacctgctagagtggattcgtcggacgatc
ccttggctggagaaccggacccaggagaaaaccgtgaaagacctgcaggccaaacaggag
gacttcagagattaccgcacagttcacaaaccacccaaggtccaggaaaagtgtcagctg
gagatcagcttcaacactctgcagaccaaactgagactgagcaacagacctgccttcatg
ccgtcagaaggacgcatggtgtccgacataaacacggcgtggcacaacctggagggagcg
gagaagggatacgaggagtggatcctgagtgagatcaggcgtctggagagactggagcat
ctggctgagaagttccaccagaaagccgccatccatgaatcctggactgacggtaaggaa
gccatgttgacccagaaagactacgagacctcctctctgtcggaggtgaaagcgttgcta
cggaaacacgaggccttcgagagcgacctggcggcccaccaggaccgagtggagcagatc
gccgccattgctcaggagctcaatgaactggactattacgacgccgccagcgtcaacact
cgctgccagaagatctgcgaacagtgggacatcctgggatcgctcacccacaggcgcaaa
gagtcactggagagaacggagaagcagctggagtcgatagatgagctctacctggagtac
gccaagagggcggcgccgttcaacaactggatggagggcgccatggaggacctgcaggac
atgttcatcgtccacaacatcgaggagatccagggtctgatctcggcccatgagcagttc
aagtccacgctgccggaggccaacaaggagcgcgaggccatccaggccatccaggccgag
gtgcagaggatcgcccagagcaacggcatcaagctgagcagcgccaacccctacaccacc
atcacgccccagagcatcgacagcaagtgggagaaggccatggccatggtgccgcagcgc
gacaacgccctgcagcacgagctgaacaaacagaactccaacgacacgctgagagccacg
ttcgccgcccaggccaacgcagtcggcgcctacatccaggccaagatggaggagatcggc
aggatatccatcgagatgaacggcaccctggaggaccagctgaccgacttgaaggagtac
cagaagaccatcatgtcctacatgccggagatcaacaagctggagggacaccaccagcac
atccaggaggcgctgatctttgacaaccagtacacgtcctacaccatggagcacctccgt
gtgggctgggagcagctgctcaccaccatcgccagaaccatcaacgaggtggagaaccag
attctgacccgcgacgccaaaggcatcagccaggagcagctgttcgagtaccgcgcctcc
ttcaaccactttgacaaggatcacagtgggggcctgaaggcggaggagttcaaggcctgt
ctgatcagtctgggctacgatgtggagaacgacaagcagggtgacggggagttcaaccgc
atcatgggcatcgtagatcccaacagcaccggcgttgtgaccttccaggccttcatcgac
ttcatgtccagggaaacgaccgacacggacacggccgaccaggtcatcgcctccttcaag
atcctggctggagacaagaacttcatcacggcggacgagctgcggagggagctgccgccg
gaccaggccgagtactgcatcgcccgcatggcgccgtacgcggggcccgacggcgtcccc
ggcgccctggactacatgtcgttctccacggccctgtatggagagagcgacctgtag
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