Gambusia affinis (western mosquitofish): 122832862
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Entry
122832862 CDS
T07758
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04517
IgSF CAM signaling
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122832862
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122832862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122832862
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122832862
Intermediate filaments
Intermediate filament-binding proteins
122832862
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Helical_needle
PH_20
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
122832862
NCBI-ProteinID:
XP_043975974
LinkDB
All DBs
Position
LG06:complement(3058267..3137073)
Genome browser
AA seq
2664 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPISSGFWETECTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHSLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKINTADNRETRSAKDALLL
WCQMKTAGYSEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFNKLTRSNATHNLQQAFNVA
EHHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIETK
TIINRYDALASDLLEWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPQDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
MELSSEMEKEGYYDIRRILACKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEDTQALLLSKDFGKHLLEVDDLLQKHSLQEADISVQAERVETLNAAALKFTTIEGYQ
PCDPQVICNRVNHVSSCLEELKQLAAKRRAELEESRQLWAFFQELEESEAWIREKSSILA
SQGFGKDLSSVLRLLQKHKTLAGELLAHRSLLQNTIKRGKQILTEKSFGTAGIQERIMEV
KDEWKKLEDQAAQHLGHLQEALNFFQFSTETDDVAAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHKGVTEAIDKHRLHVVALRKHMVVLSLQYTEQEEVQVRLGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLEKMEIPEKLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSAEVRGCQDHLNSRWNTIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEFL
AAAHPSRTMEILVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEDAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEVAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSERIRERIDTLAKRGNQNRV
LAQQWLEKLNDQWELQRFLQDCHELGDWVYEKMLMARDSSRDETQKLHKKWQKHQAFMAE
LAQNKEWLDKIEKEGQQLIKEKPELSPVVRKKLEEIRECWLDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLAYVDQGQDLTTVNKQLKKLQTMETQMEEWYNEVGQLQVQ
TASIPQQTQIQGTVVERQAAVETRMARLIEPLKERRRLLLASKEVHQVGRDLEDEILWVQ
ERLPLAMSQEHGSSLQAVQQLMKKNQTLQRELEGHRNRIEDVLERAGIIATIRSPEADCV
RAGHDQLAQLWALLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLLLEQTIEDYAETIGLLSQQCRQLLEMGHPDCERISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDFEHVSVLQEKFTEF
ASETGNVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCKEILAQIEDKHRRLPEVRARQGSTSNTSTLQRLLQSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQCWKELLTSCEECRLQITTETDKLRFFSMVR
DQIMWMESIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARSQSTLECIEMGKMLLAAR
NPAAEEIKEKLEKVIAKQRELSEKWDKHWEFLQQLLEVHQFAQEAMVAEAWLTAQEPLIS
SKELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLRAEQSKLPPTPLLGRK
VFLDPQDAAPGPATLPRLPVSPVMRQTIYEQNEATTPPSPSPATPTPSPSAAARRLASAV
VNSSGYRHGGVVAVQPAASSIASVATAAMLVSANQMRESASTAKEQATKAMSYLQPEAKT
LPYLRQPKIKHLDDAVTPLIVASRLERGRERGREREERAEVAVMAEVVLQEPGRERLHSE
PTRGPRGSRTDPLGRAEPQVQAYQRQLSSEQLIQARRDELPQEVRREQAGRRDRRTLERQ
TSSEQEGHEGRRRERERHRVERQESSDNDVGREQSDRRSTGGEKRTTMAEIVEQLQEREA
AQARGEVPRLPNGLPEKSSRPDRPRARDRPKPRRRPRPKEPGETTRRSRSAPAQSSQAAP
QPPTHTAHHEGFLFRKLDIESMKKSTNSRSWVNLYCVLNKGELGFYKDAKNTTTPYNNEP
LLSLSHCHCDVTNGYKKKKNVFTLKTKDGSEFLFHAKDEEDLKAWVNNITASISEHEEIA
KWGQPQPTTSSTDEGTRRDGSKVDNRSDRGGERSDRGDRIERADKEKEREKEKEKEKERE
RGERSEKSDRAGKSDGKRSEKKKK
NT seq
7995 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctctccagacctggacaatgcagaagcccagcgccagctcaacaacaac
aaccgaccaatcagctccgggttctgggagaccgagtgcaccagcgccaaactgttcgag
tgttcccgcatcaaggctctggcagatgagagagatgcagtgcagaagaaaaccttcaca
aagtgggtcaactcccacctggccagagtgtcctgtcgcatctctgacctctacaacgac
cttagggacggctacatgctcaccagactgctggaggttctcagtggggagctactgccg
agacctaccaggggtcgtatgcggatccacagcctggaaaacgtggacaaagctctgcag
ttcctgaaagagcagagagttcatctggaaaacgtcggttcccacgacatcgtggatgga
aaccatcgcctcaccctcggcctcatctggaccatcatccttcgctttcagatccaggtg
atcaaaataaacacagcggacaacagagagacccgctccgccaaggacgcgctgctgctg
tggtgccagatgaagactgcagggtactcagaggtaaacattcagaacttcaccacctgc
tggagagacggcctggccttcaacgccctcattcacagacacagaccggacctgatagag
ttcaacaagctgacgcgctccaatgcgacgcacaacctgcagcaagccttcaacgtcgcc
gagcaccacctaggtctcaccaaactcctggaccccgaagatgtgaacacagagaatcca
gatgaaaagtccatcattacgtacgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggaggggaagagggttggcaaggtgttggacaactgcatcgagacaaaa
acaatcatcaaccgctacgacgcgctggcgtcggacctgctggagtggatcgagaaaacc
atcgccgtcatcagcaaccagaaattcgccaactctctgactggagtccagcagcagctg
caggccttcacaacctactgcacgatagagaagcccatcaagtttcaggaaaaaggaaac
cttgaggtccttctgttcaccatccaaagcaaactcagagccaataaccagaaaccctac
gtgcctcaagacgggaagctcatctcagacatcaacaaggcctgggagcgcctggagaag
gcggagcatgagaggggcgtggctctgcgtaaggagctgattcgtcaggagaagctggag
ttgctagctcaacgcttcgatcacaagacgaccatgaggcaagcctggctcaacgagaac
cagagactcgtgtcgcaggataacttcggctacgatctgccggccgtggaggcggcgatg
aagaagcacgaggccatcgaggcggacatcgcctcgtacgaggagcgcatcggcgtggtg
atggagctctcctcggagatggagaaggagggatactacgacatccggcgcatcctggcc
tgcaaggagaacatcctgggccagtggagcctgctgaaggagctggtggccggcaggcgg
acccggctggagaagaacctggctctgcagaaaacctttcaggacatggtctacatgatc
gactggatggaggacacacaggctctgctgctgtcgaaggacttcgggaagcatctcctg
gaagtggacgacctgctgcagaagcacagcctgcaggaagctgacatctccgttcaggcg
gagagagtcgagacgctcaacgctgcggcgctcaaattcaccaccatagagggctaccag
ccgtgcgacccgcaggtgatctgcaaccgtgtgaaccacgtctcttcctgcctggaggag
ctgaaacagctagccgctaaacgccgcgcggagctggaggagtcgaggcagctgtgggcg
tttttccaggagctggaggagtcagaggcctggatccgagagaaaagctccatcctggcg
tctcagggcttcgggaaggacctgagcagcgtgctgcggttgctacagaaacacaagact
ctggccggggagctgctggcgcaccgctcgctgctgcagaacaccataaagcgggggaaa
cagattctgaccgaaaagagcttcggcacggcggggatccaggagcgcatcatggaggtg
aaagacgagtggaagaagctggaggaccaggcggcgcagcatctcggccacctgcaggag
gcgctcaacttcttccagttctccacggagacggacgacgtggcggcgtggctgcaggac
gcctaccgcctggtctccagcgaggactttggccacgacgagtactccactcagtcgctg
ctgaagaagcacaagggcgtgacggaggccatcgataaacacaggttacatgtagttgct
ctgcgcaaacacatggtggtgctgtctctgcagtacacagagcaggaggaggttcaggtg
cgtttgggtgaggtggagcagctgtacacggaggtcgcagaggtcgccgtactcagacag
cagtggctccacgacgcgctcgccgtgtaccgcatgttcagcgaggtgaacgcctgcgag
ctctggatcgacgagaaggagcagtggctggagaagatggagatcccggagaagctggag
gacgtggaagtggtggcgcacaggtttgaaagcctggaccaggagatgaacagcctgatg
gggaggatcctggacgtcaatcagatcgttcagcagctgctggacggaggtcatccgtct
tcagcggaggtcagaggttgtcaggatcacctcaactccaggtggaacaccatcgttgag
ctggtggagcagaagaaggatcagctcgactcgatgcttcgcctgcagaattacctcctg
gagtgcgccgagatcaagtcccagatccaggacaagaggaaagccatcgacgccacgcag
tacatgggcagcgacctggggggcgtcctcgctctgcagcgacgcctctccaccatggag
ggggcgctgtctgtcctggagcccaaactgctgcatctacaggaggaagcagagtttctg
gccgccgctcatcccagccgaaccatggagatcctggtgccgttcgatggcatcagcgtc
gagtgggaggagcttaaaaggacgctacagggatgtgaggactcgctgatggtggccagc
aggctgcagagcttcatacaggacctggactccttcctcacctggctggtccagacccaa
acagccgctgcctcggatcagctgcccaacgatctggaggaggcagagaagctcatcaac
aagcacgccgctctcaaagaggagatcggacggtacgaggaagactacgagcgtctgcag
gccatgaacgagctgctggagtcagaggacgcccccctgccgcaggccgccctgcagcag
tggctgcagaagctcgacgtcggctggaacaagctcctggagatgtgggagagccggagg
gaggttctggtccaagctcacatctttcacctgttcctgcgagacgtcaaacaagcggag
tccttcctgaacaaccaggaatcggctctggcccacgtggagctccccaccacggtggaa
acggttgaggtcgccatcaagaaacataaggacttcactaccaccatggagctcaacctg
cacaggatcaaagctgtgatcgaggcgggagaaagcctgatcagccagaacaacatctac
tccgagcgaatccgggagcgcatcgacactctcgccaagaggggaaaccagaacagggta
ctggcccagcaatggctggaaaaactgaacgaccagtgggaacttcagagatttctccaa
gactgtcatgagctgggggactgggtgtacgaaaagatgctgatggcgagggacagcagc
cgagacgagacccagaagctgcacaagaagtggcagaagcaccaggctttcatggccgag
ctggcccagaacaaggaatggctggataaaatcgaaaaggaagggcagcagctgataaag
gaaaagccggagctgagcccggtggtccggaagaagctggaggagatccgggagtgctgg
ctggacctggagagcaccactcaggccaaagctcgccagctgtttgaggccaacaaggcg
gacctgctggttcagagctacgaaagcctggaccaacggctggggcagctggaggggcag
ctggcctacgtggaccagggtcaggacctcaccaccgtcaacaagcagctcaagaaacta
cagaccatggagacccagatggaggagtggtataatgaggtggggcagctccaggtccag
acggcctccatcccgcagcagacgcagatccagggcacggtggtggagcggcaggccgcc
gtggagaccaggatggcccgactcatcgagccgttgaaggaaaggcggcgccttcttctg
gcgtctaaggaggtccatcaagttgggcgagacctggaggacgagattttgtgggtccag
gagcgcctccctctggccatgagccaggagcacggctcatcgctgcaagccgtccagcag
ctcatgaagaagaaccagacgctccagagggagctggagggccacaggaataggatagaa
gacgtcctggagagggcagggatcatcgccaccatcaggagcccagaggccgactgcgtc
agggcgggccacgaccagctggcccagctgtgggccctgctgtgggccgagacggagcgc
aggcagctggttctggacgccatgtaccaagcccagcagtactacttcgacacggccgag
gtcgaggcctggctgagcgagcaggagctgcacatgatgaacgaggagaagggaaaggac
gagccgagcacgctgcagctgctgaagaaacatttgctgctggaacaaaccatcgaggat
tatgctgagaccatcggcctgctgtcgcagcaatgtcgccagctgctggagatgggacac
ccagactgcgaacggatcagcaagcgccagtcgcagatcgaccgtctgtacgtgtctctg
aaggacctggtggaggagaggaagagccgcctggagcagcagtactggctgtaccagctc
aacagggaggtggacgagctggagcagtggatcgcccagagggaagtggtggccagctcg
cctgaactgggccaggactttgagcacgtctccgtcctccaggaaaagttcacagagttt
gcgtcggagacaggaaatgtggggcaggagcgcgtgacggccgtcaatcagatggtggac
gagctcattgactatggtcactctgaggccgccaccatcgccgagtggaaggacggggtc
aacgaggcctgggccgacctgctggagctcatggagacccgagcgcagatgctcgctgct
tctcaccagctgcacaagttcttctccgactgcaaagagatcttggcccagattgaggat
aagcaccggcggctcccagaggtccgggctcggcagggcagcacatccaacaccagcacg
ctgcagaggctcctgcagagcttcgaacaggacatccagctgctggtcactcaggtgcgt
cagctgcaggaaagcgcggcccagctgaggacggtgtacgcaggcgagaaggccgaagcc
atcgcttgccgtgagcacgaagtgatgcagtgctggaaggagctgctgacgtcctgcgaa
gagtgccggctgcagatcaccacggaaacggacaagctgaggttcttcagcatggtccgg
gatcagatcatgtggatggagtccatcatctgtcagatcggcaccggggagaaacccagg
gacgtgtcgtcggtggaggtgctgatgaactaccaccagagcctgaagagcgaagtggag
gcccgcagccagagcacgctggagtgcatcgaaatgggaaaaatgctgctggctgctaga
aaccctgcagctgaggagatcaaggagaagctggaaaaggtgatcgcgaagcagcgtgag
ctttcagagaagtgggacaaacactgggagttcctccagcaactgttggaggttcaccag
ttcgcccaggaggcgatggtggcggaggcctggctgacggctcaggaaccgctgatcagc
agcaaggagctgggcggcagcgtggacgaggtggagcagctcatacgccgacacgaagct
ttccggaaagccgccgccacctgggaggagagattcagctcactgcggcgtctcactacg
gtggaaaagctgagagcggagcagagcaagctgccgccgacgccgctgctgggccgtaaa
gtcttcttggaccctcaggacgcggcgccgggtccggccacgctgccccgcctcccggtc
tcccccgtcatgaggcagaccatctacgagcagaacgaagccaccacgccgccgtcgccc
tcgcccgccacgcccacgccgtccccgtcggcggccgcccgtcggctcgcctccgccgtc
gtcaacagctccggctaccggcacggcggcgtggtggccgtccagccggccgcttcatcc
atcgcctccgtcgccacggcggccatgttggtgtcggctaatcagatgcgggaaagcgcc
agcacggcgaaggagcaggcgacaaaagccatgagctacctgcagccggaggcgaagacg
ttgccgtatctacggcaaccgaagatcaaacacttggacgacgcggtgacgccgctgatc
gtggcgagccgcctggagcgagggagagagcgagggagggagagagaggagcgggcagag
gtggcggtgatggcggaggtggtgctccaggagccgggccgggagcggctgcacagcgag
cccaccagggggccccgcgggtccagaaccgacccgctgggccgagccgagccgcaggtc
caggcgtaccagcggcagctgtccagcgagcagctgatccaggcgcggcgcgacgagctg
ccgcaggaagtccggagggagcaggcggggcggcgcgacaggcggacgctggagaggcag
acgtccagcgaacaggaaggacatgaaggccggcggagagagagagagcgccaccgagtg
gagaggcaggagtccagcgacaatgacgtggggagggagcaatccgaccggcgctccact
ggaggagagaagagaaccaccatggcagaaattgtagagcagcttcaagaaagagaagca
gcacaggcgcgtggcgaggttccccgcctgcccaacggtctgccagaaaagtcttcccgt
ccggaccggcccagagcccgggaccgacccaaacccagacggcggccgcgccccaaagag
ccgggagaaacgacgcggcgttcccgatcggctccggcccagagcagccaggcggcgccg
cagccgccgacccacacggcgcaccacgagggcttcctgttccgcaagctggacatcgag
agcatgaagaagagcaccaacagcaggtcatgggtcaacctgtactgcgtgctgaacaaa
ggggagctgggcttctacaaggacgccaagaacacgacgacgccctacaacaacgagccg
ctgctcagcctgtcccactgccactgcgacgtcaccaatggatacaagaagaagaagaac
gtcttcacgctcaaaacgaaggatggcagtgaatttctgtttcatgcaaaagacgaggag
gacctcaaagcgtgggtgaacaacatcaccgccagcatttcagagcacgaggagatcgcc
aaatggggccagccccaaccaactacctcatccaccgacgaagggacgcgacgagacggc
agcaaggtggacaaccggtcagaccgcggcggcgagcgctccgaccgtggagaccggata
gagcgcgcggacaaagagaaggaacgggagaaggagaaagagaaggaaaaggagagggag
cgaggggaacgctcagagaagtcagatcgggcaggaaagtcggacggaaaacgctcagag
aagaagaagaaatga
DBGET
integrated database retrieval system
