Gambusia affinis (western mosquitofish): 122832940
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Entry
122832940 CDS
T07758
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122832940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122832940
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
122832940
Endosome - Golgi transport
Arf GTPase associated proteins
122832940
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
122832940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_2
SAM_1
PH_11
RA
PH_6
PH_3
SOS1_NGEF_PH
PH_8
PH_13
SAM_CEP-1_C
SAM_TNK
Motif
Other DBs
NCBI-GeneID:
122832940
NCBI-ProteinID:
XP_043976106
LinkDB
All DBs
Position
LG06:complement(17277180..17342561)
Genome browser
AA seq
1606 aa
AA seq
DB search
MSLTESSANVSDWLSTLRLEQYGEAFQEAGLTTLQDLQNLTPDQLDRMGINLPGHQKRIL
ANINKMTASYEAYSNVIKPEGSEQTSHPEVKRKEKPVPIPMQRKVEEGKMDGEIRPTPRE
RDKPVPKERQLSDIQDHSNREGETKPDPLQRYSAPVGGKEEERSGAPDEKKAKPVPKERT
KFRPNYSVNCHSTPIVSPLPDTSLPPVPPRSTPNCPPQPFISSLSSSSPAQHSSSLSLDR
IIVVPPEVKCQSSSQKSTPTSTLVSTEAFVQTPSIQSTTPRPNSLPLQPSTTSFGGDKVR
KASSISSPSEDKNIPPLPPKAGSKGPPPIPQRVPLQSPKTHSPPLTKKGNEELIQTDPTP
QVPLRNRTPQAQEISKPSDQTEVQPALPTRKISKPPLLVPIDDSSNDYVDTDLLNPSVQQ
RKVADRDMSLQVPIHQPKRVCSLYSDDELLDEDDPDSPPWQTERIGNLPGSFCLPNSGRL
STSIKEDSSQLSSVIKMGWLDKNPPQGALYYQRRWVKLEFDYLRYFDNEKEVYSKGFIST
AFITNVSSVGEVKFEVATNNRTFIFRAENEDERNEWVTELRNCTGGPKRPITLIAGSPLT
PDYYGYLELRGLRSKLFTVVASDKVLLYKNADDYRIGVGITFIDMNVGNVKDSDRRSFDL
TTPYRIFSFIAESEQSREQWVQAMRNAIGEALSNSEVVEQIWREPSNSFCADCGAPQPDW
AAINLCVVICKQCAGEHRGLGPSISKVRSLKMDKKIWTEELIQVFLKLGNERVNSFWAAN
IPPSEALLPSSCNEDRRRFISNKYRQGKYRKYHALYGNQKELNNALCINVQCSDLLETLS
LIFCGADVNCSTGMANCPSPESLASAHSQPLQAELIKHNLNTELPQLQVEADMDLKHYPP
PPCVSYEGYLFKTASMGRAVAERKVKEEFSRRWCMLNDGIFNYYEHDKSTNPNGTLKASE
IVCLAVDAPEKHGYDFTFELYSESERIYLFGTDDPDSHKEWVKCIAKTFIPTTAEPLLRL
NFERIGRLKCKDGLNLQKSKVGWFALAGSTLHVYLENSKGEEIHLRKLNELSIQQDNEVL
VLVEKGRTLYIEGERKLDFAGWCGAIQAAAGSGGDTLSQQQLTDTDIPVIVLSCIDYITQ
CGMTSEGIYRKSGVNSRVAALCDRFRRDARSLRLKEGEHQVDDVSNTLKRFFRELEEGLF
TSEYAYSWLTITALQDENKKISDYKALLDRLPRVNKATLQALINHLYCVQRFSELNQMNL
HNLAIVFGPTLFQTDGKDYAAGRAIEDLIEHYTVIFEVDEQQLNRQLEEIKAIIQMREKC
NTKFPSRPRFEGDGHFICTVYLEELKDTSEQHVKIPGSMTAAELAYEVLDRRNIPVKDKD
YWSCWEVCEEIERPLHYQERVLPILHSAGNESHLLIKKQPAMDAMITYLATKVDVSKHGM
MKFREERSILGLGLSTGNFHDRFFILNVTSLRMYKDVRSNRAERDWVVKNLKIYLGIKKK
LRPPTCWGLTVVYESKKQEKSERQQWYLCCETQSEMREWYATFLSIQNDGNLWPQDGVQQ
NRVSRVLPDTRHGNVSLIPLRGSENEMRNSVAAFSQDALALLRDVR
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgactgaatccagtgctaacgtgagtgactggctgagcacgctacgtttggag
caatatggtgaggccttccaggaggctgggctgacaactttacaagacctccagaacctc
acgccagatcaactggatcggatgggcatcaacctgccaggtcatcagaaacgaatcctg
gcaaacattaacaaaatgactgctagttatgaggcatactctaatgttataaagccagaa
gggtctgagcagaccagtcatcctgaagttaaaaggaaagagaagcctgtgcctattccc
atgcaaagaaaagtagaagaagggaaaatggatggtgagataagacctacacccagggag
agagacaaaccagtccccaaggagagacaattgtctgatatacaagaccacagtaataga
gaaggagaaacaaagcctgatcctctacaaagatactctgctcctgtaggaggaaaggag
gaagagaggagtggagcaccggatgaaaaaaaggctaagcctgtgccaaaggagaggact
aagtttcgtcctaattattcagttaactgtcactctacacccattgtgtctccactgcct
gatacatctttaccacctgttcccccacgcagcacacctaactgccccccacagcccttc
atctcatctctgagttcctcatctcctgctcaacactctagctcattgagtttggatagg
atcattgtggtacctccagaagtaaagtgccaatcttcatcccagaaatctacccccacc
agcacccttgtttccacagaagcattcgtccaaactcccagcatccagtcgaccacacct
aggcctaattcattacccctacagccttctaccacatctttcggtggggataaagtcagg
aaagcttcttccatctcctctcccagtgaggacaaaaatattccacctcttcctccaaaa
gcaggatctaaaggcccaccaccaatcccacagcgggttcctctgcagtctcccaaaact
cacagcccacctctgaccaagaaaggaaatgaggagctgattcagaccgaccccactcca
caggttccattacgcaacaggacaccacaagcgcaggaaatcagcaaaccgtccgaccag
actgaagtacagcccgccctgcctacaaggaagatctccaaacctcctctcttggttcca
atcgatgatagttctaatgactacgtggatacagacctgcttaaccccagtgttcagcaa
aggaaggtggcagacagggacatgtccctgcaagtacccattcaccaaccaaagcgggtc
tgttctttgtatagcgatgacgagctgttagatgaagatgacccagattctcctccttgg
cagactgaacgcatcggcaacctgcctggcagcttttgcctgcctaactctggcagactg
tccacatctattaaggaagacagttcccaactttcttctgtcatcaagatgggctggctg
gacaagaatccaccacagggggctctttattaccagagacgatgggtgaagctagaattt
gactacctaagatactttgacaatgaaaaggaggtgtattccaagggctttatctcaaca
gcctttatcactaatgtgtctagcgtgggggaggtgaagtttgaggttgccacaaacaat
cggacatttatcttcagagctgaaaatgaagatgaaaggaatgaatgggtgactgaactg
aggaactgcaccgggggacccaagcgccccataactttgatcgcaggctcacctttgacc
ccagattattatggctatttggagctcagagggctacgatccaaactttttactgttgtt
gcttcagataaagtccttttgtataagaatgcggatgattatcgcatcggagtgggaatc
acatttattgacatgaacgttggaaatgtgaaagactcagatcgtcgtagctttgatctc
accacaccttaccgcatattcagttttatagccgagtcagagcagtcgagggagcagtgg
gtgcaggccatgaggaacgccataggagaagcgctgtccaacagtgaggtggttgagcag
atctggagggagcctagcaacagcttctgcgccgactgcggcgctccgcagccagactgg
gcggccatcaacctttgtgtggtgatctgcaagcaatgtgcaggagaacacagaggactc
ggtccgagtatctccaaagtacgaagtctgaagatggataagaaaatctggacagaggag
cttatccaggttttcctaaaactcgggaacgaacgggtgaacagtttctgggccgctaac
atcccgccaagtgaagccctattgccctctagctgcaatgaagacagacgccgcttcatc
tctaacaaatatcgccagggcaaatacagaaagtaccatgcgctgtatgggaaccagaaa
gagctcaacaatgccctctgcataaatgtgcagtgcagtgatttgctggagacgctgagc
ctgattttctgcggtgcagatgtgaattgttcaaccggtatggcaaattgtccgtcccca
gagtcccttgccagtgcacattcccaacctctgcaggctgagttaatcaaacacaacctc
aacacagaactgccccagttacaggtggaggctgatatggatctgaaacattacccaccg
ccgccttgcgtgtcttacgagggctacttgttcaaaactgcatccatggggcgggctgtg
gcggagcgcaaagtgaaagaggagttcagtcgtcgttggtgcatgctaaatgatggcatc
ttcaactactatgaacacgacaagagcaccaatcctaacgggacacttaaagcatcggaa
attgtttgtttggctgtcgatgcgcctgagaagcacgggtatgactttacctttgaactc
tactcagaatctgagcgtatttatctgtttggcactgatgatccagacagccacaaggag
tgggtcaagtgtattgccaagacctttatcccaaccacagcagagcctttgctgaggctg
aattttgagcggatcggacggctgaagtgtaaagatggcttgaacttacagaaatccaag
gtcggctggttcgctctggctggctctactcttcatgtttacctggagaacagtaaggga
gaggagatccacctgcgtaaactcaatgaactttcaatccaacaagacaatgaagtgttg
gttcttgtggagaaaggcaggactttgtacatcgagggagaaaggaagttggactttgcc
ggctggtgtggggctatccaagcagcagcagggagcggaggagacacactgagtcagcag
cagctcacagacacagatatacctgtcattgtactcagctgcatcgactacatcacgcag
tgcggaatgacatcggaggggatttatcggaaaagcggcgtgaactcccgtgtggcggcc
ttgtgcgacagattccgccgagacgctcgtagccttcgattgaaggagggagagcatcag
gtggatgacgtctccaacactctcaagcgcttcttcagggagttagaggaggggctgttt
acatcagagtatgcctacagctggctcaccatcactgccttacaggatgaaaataagaaa
atctcagactacaaggctctattggacagactgcctcgcgtcaacaaggccacactacaa
gccctcatcaaccacctctactgcgtgcagcgtttctctgagctaaatcagatgaacctc
cacaacctggccattgtgttcggtcccactctgttccaaaccgatgggaaggactacgcc
gccggccgagccatagaggacctcatagagcactacactgtcatatttgaggtggatgag
cagcagctgaacaggcaactggaggagatcaaagccatcatccaaatgagagaaaaatgc
aacaccaagtttccttcacgtccgagattcgaaggtgacggccacttcatctgtactgta
tatctggaagagctgaaggacacatcagagcagcatgtcaagattcctggttcaatgact
gcagcagagctggcgtatgaggttttggacaggcgcaacattccagtcaaagataaggat
tactggagctgctgggaggtctgcgaggaaatcgaacgtccactgcattatcaggagcga
gtcttgcccattcttcactctgctggcaatgagtcccatctcctcatcaagaagcagcct
gctatggacgccatgatcacctaccttgccactaaagtcgacgtatccaagcacgggatg
atgaaattcagggaagagcgaagcatcctgggtttggggctatccactggaaatttccac
gatcgatttttcattctcaatgtcacctctctcagaatgtacaaggatgttagaagtaac
cgtgcagaacgggattgggtcgtaaaaaacttgaagatttacttagggatcaagaagaag
ctccgtcctcctacatgttggggtttgactgttgtgtatgaaagtaagaaacaagagaag
tcagagagacaacagtggtatctctgctgtgaaacccagtcggagatgagggagtggtac
gctacatttcttagtattcagaacgatggcaacctgtggccccaggacggagtccagcag
aaccgggtgagccgtgtgctgccggacactcgtcacggtaatgtgtcactgatcccgttg
cgtggcagtgagaatgagatgcggaacagcgtagcagctttcagccaagacgcgcttgct
ctccttagagatgtgcgataa
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integrated database retrieval system
