Gambusia affinis (western mosquitofish): 122833129
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Entry
122833129 CDS
T07758
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122833129
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
122833129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
122833129
NCBI-ProteinID:
XP_043976386
LinkDB
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Position
LG06:24787406..24815559
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AA seq
2104 aa
AA seq
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MSSCFVPNGASLEDCHSNIFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHHTPGRRELWLFWWGDDPSFAELIHNELSSEEDGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEEKIINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLGEEHLSLAQQSSSPLQVILSPYGLNGTLTSQAFKMSDHPTQKLIEEWRQFY
PICPNLKEVPEDKMEDADWEDDSLAAVEVLVAGVRMVYPSCLVLLPLSELPAVVPQGSAN
TPGMQSGAHQGQAAHRDPAMSSVTLTPPTSPEEAHTDYQPAQRWLKMSSGSDCYSSNNTL
HGGKIPRRLSSQMVKTVWQEYNINRAGNKRKFTTLTNGTCEEEPDRSGFWDFVEPTHRPS
CNCSRPKNQKQRSSSTSGHPPSSGQPPQTAAKHKLAEKLEKGEKQQRRPQTPFHHRNSVS
EEQSMEPQSQRLCPRPQEEGSYPSLHHADTAPPKAPSLHAHDPPADLVGSPPPPPLSPRP
CDHIDGELTPGGAKNSSTPIHQAFYPPSVEPCLMPQKSSTEEPQPDSAAYPSNYNETFEP
TVFIGSAINPREDSTHNPWKYFNLPRKKTSNFLTPQLPVDKIRDDSSGGSETVVSVTELM
CNCSHPLKVSQELVRTYAQRRNSHLGSSAGDGEHGDESDPYAFVDGDDEFSITEKRDKVG
PEKDGNKKQKLDDGGTVTSSDDGQGQSSCKPSASTSFIHDEDLVVSFSDLEKMFNSDEDE
QEPGSKRAGAGNNDKTNLKEPKPERLDPLSSSDLMMMYPTPPSLDQNGYSPGNSGTKDGL
ETGAGLALLDSSQLSSHFKIEVEEGFCSPKPSEIKDFSFVYKPETCQSVIGCSMYAPLKT
LPSQCLLPVKLPEDCVYTPSWTMGKMELMPPVSTVSLLTKDSNVPSVEPDYNQPFTPQTN
TPFLPGSAPPSNSGPGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSLKYENSDLYSP
ASTPSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCVCNMNIRG
ADVGVYLKDNGEDQYPCTCGFSAVANRRFGQSAGLFLEDELDVVGRGSDAGRDTERRFEE
LRGSLKEKPPDELILLLQDQCTNPLAPMAGVEWPKPSAAAPSSFLRVEERDCYNDCYMAL
EHGRQFMDNMSGGKVDETLVKSTSLHQWPKCKSADMSKLYSQDVLRVLLSLQPALQDTIQ
KKGVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYW
EKLLLDPFGSQRDVGYVVICPENQTLLRGAKTFFKDLSVMYEACQLGQHKPICKSHPEGI
LTVGSPEGRSVKEQPLSDWFLKMAARESNNEAFHKLKLFAQVCRYDLAPNLSELPLDSSL
LSQRNPTKPAPQTSTSSSPSSGLQSANTTSTNSSQPAQVNSTPPSSSSSLSSSSSSSGSQ
TNGAMASGKPGSYMPFGTGGLQGSTTQNGPQTNSQGAGDNASSQPQVSAETQESTMERDK
VGKPTDGESHAVSYPPAIVVYIVDPFSYENADKEVHSSTYTVGLLRCFMEMLPFLPAHIR
NAVSVQIVPCQYLLQPVHSGDRHIYSQHLKSLAFSVYTQCRRPLPNSTNFKALTGFGPGL
ALDMALKNPERPECLRLYTPSFILAPVKDKQTELGETFGEASQKYNVLFVGYCLSHDQRW
LLASCTDQHGELLESCIISIDVPNRARRKKSSARRVGLQKLWEWCVGLVQVTSLPWRVVI
GRLGRMGHGELRDWSILLSRTNLQSLSKRLKETCGMCGISAADTPSILSACLVAMEPQGS
FVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAMVQVNTNTSEPIDIS
FNHINPDGSEGMGFFELFGSDMDPELINILPNSPTTSPVHSPGHHYHHGEAGKGQGADRM
ESHEEALSILQQPMALGYFISTAKAGPLPDWFWSACPEAQNQCPLFLKASLHLVSSVQSD
ELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCNPATQDRRSCLPVHFVVLTQIYNFI
MNML
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgctttgtacctaacggggccagtttggaggactgccactccaacatcttc
tgcctagctgacttgacggggataaagtggcggcgtttcgtgtggcaggggcccacttcg
tcgcccatccttttcccggtgaccgaggaggaccccatcctgtgcagcttcagccgatgc
ctggcagcggatgtgctgagtgtgtggaggaggcaccacaccccgggtcgcagggagctc
tggctcttctggtggggggatgaccccagtttcgctgagcttatccacaatgagctctcg
agcgaggaggatggcgagtgggagagcggcctgtcctacgagtgccggacgctcctcttc
aaagccattcacaacctgctggagcgctgcctcatgaaccgcggcttcgttcgcatcggc
aagtggttcgtcaagccataccaaaaggaggagaagatcatcaataagagcgagcatctg
tcctgcgccttcactttcttcgtccatggcgacagcaacgtctgcacgagcgtggagatt
gcccaacatcagcctcttcagagactcggcgaggagcatctcagcctcgcccagcagagc
tccagccccctgcaagtcatcctcagcccgtacggcctgaacgggacgctcaccagtcaa
gctttcaagatgtcagatcacccaacgcagaagctcatagaggagtggaggcagttttat
cccatctgccccaatctgaaggaggtcccagaagacaagatggaggatgcagactgggag
gatgactccctggctgcggtggaggtccttgtcgccggagtcaggatggtgtatccctcc
tgcctggtgctgctccccctgtcggagctccccgccgtggtgccccagggttcggccaac
actccgggaatgcagagcggcgctcaccagggtcaggcggctcacagagacccggccatg
tcctcggtcactctgactcctcccacgtcgccagaagaagcccacacagactatcagcct
gcccagagatggctgaagatgtcttcagggtctgattgctacagctctaacaacactctt
cacggcggaaaaatcccccgcaggctttccagccagatggtgaaaaccgtgtggcaggag
tacaacataaaccgagcagggaacaagaggaagtttacaaccttgacgaatggaacctgc
gaggaggaaccggacagaagcggattctgggattttgtggaaccaactcacaggccgtcg
tgcaattgctcgaggcctaaaaaccagaagcagcgatccagcagcacctcaggacacccg
ccgtcttcgggccagccgcctcagaccgccgccaagcacaagctggctgagaagctggag
aagggcgagaagcagcaacggaggccgcagacgcccttccaccaccgcaactcggtgagc
gaggagcagtccatggagccgcagtcccagagactttgcccgaggccgcaggaggagggc
tcgtatcccagcttgcaccacgcggacacggcgccgcccaaagccccttccctgcacgcg
cacgaccctcccgcggacctcgtcggctcgccgccgccccctcctctcagcccgcgtccc
tgcgaccacatcgatggtgagctgacgccaggcggcgccaagaattcttctacacccatt
caccaggcgttctacccgccttccgtggagccctgcctgatgcctcagaagagctcgacg
gaggagccgcagccggacagcgcggcctacccctcaaactacaacgagacctttgagccc
acggtgtttattggttcggcgataaatcccagagaagactccactcacaacccctggaag
tacttcaacctgcccaggaagaaaacctccaacttcttgacgccacagttacctgtggat
aaaatacgagatgattcgtcaggaggttcggaaacggtggtgtccgtcacagagctgatg
tgcaactgctcacatcccctcaaagtgtcgcaggagctggtcaggacctacgctcagcgg
aggaacagccatctcggctcctccgcgggcgacggcgagcatggcgacgagtccgacccg
tacgccttcgtagacggagacgacgagttcagcattacagagaagagggacaaggtcgga
cctgagaaggacggcaacaagaagcagaagttggacgatggaggaacggtgacttcttca
gatgacggtcagggccagtcgagctgcaaaccttcagcctcgaccagcttcattcacgac
gaggacttggttgtgtccttcagcgacctagaaaaaatgtttaactctgacgaagatgag
caagagcctggatctaaaagagccggagccggtaacaacgacaagaccaaccttaaagaa
cccaaaccagagcgcctggatcccttgtcgtcgtcagacctgatgatgatgtatcccacc
ccgccctctctggatcaaaacggctactcccctgggaactccgggaccaaggacggcctg
gagacgggggcgggcctcgccctgctggacagcagccagctcagcagccacttcaagatc
gaggtggaggagggattctgcagccccaagccgtctgagataaaggatttctccttcgtc
tacaagccagagacgtgtcagtccgtcatcggttgttccatgtacgcccccctgaagacg
ctacccagccagtgtctgctgcctgtcaaactgccagaggactgtgtgtacacgccgagc
tggaccatgggaaaaatggagctgatgcctccagtgtcgactgtcagcctcctcaccaaa
gacagtaacgtccccagcgtggagccggactacaaccagcccttcacccctcagaccaac
acgcccttcctgcccggcagcgccccgcccagcaacagcggccccggcatcctgccgtct
ccggccacgccgcgcttctccgtgcccaccccgcgcacgccgcgcaccccccgcacgcca
cgcgggccctccagcgtccagggctcgctcaagtacgagaactctgacctctactcgccg
gcgtccacgccctccacctgccggccgctcagctccgtggaaccggccaccgtgccctcc
atcccggaggcccacagcctctacgtcacgctcatcctctccgagtcggtcatgaacctc
ttcaaggactgcaacttcgacagctgctgcgtgtgcgtctgcaacatgaacatccgcggc
gccgacgtgggcgtctatctcaaggacaacggcgaggaccagtacccgtgcacctgcggc
ttcagcgccgtggccaaccgccgcttcggccagtcggcggggctcttcctggaggacgag
ctggacgtggtggggcgcggctcggacgccggccgcgacacggagcgccgcttcgaggag
ctgaggggcagtctgaaggagaagccgccagatgagctgattctgctgctgcaggaccag
tgcaccaacccgctggcgcccatggcgggcgtggagtggcccaagccgagcgccgccgcc
cccagctccttcctcagagtggaagagagggactgctacaacgactgctacatggcgctg
gagcacggccggcagttcatggacaacatgtcaggaggcaaagtggacgaaacgctggtg
aaaagcaccagccttcatcagtggccaaagtgcaaatctgcagacatgagcaagctgtac
tctcaggacgtcctgcgggtgctgctgtccctgcagccggcgcttcaggacaccatccag
aagaagggcgtgcgctcgtggggcgttcagggaccgctcacctggcagcagttccacaaa
atggcagggagaggctcgtacggtacagacgagtctccagagcctctgcccatcccgacc
tttctggtcggttacgagtacgattttgtggtgctgtctcctttcgggttgccctactgg
gagaagctgctgctggatcctttcggctcccagagggacgtgggatatgtggtcatctgc
ccggaaaaccagacgctgctccgtggagccaagacctttttcaaagatctgagcgtcatg
tacgaggcatgccagctgggacaacacaaacccatctgtaagagccacccagaggggatt
ctgaccgtcggctccccagaaggaaggagcgtgaaggagcagcccctcagtgactggttc
ctcaagatggctgccagggaatcaaataacgaagcctttcacaagctcaaactctttgcg
caagtgtgtcgctatgatttagctccaaacttgtctgagctgccattggacagctccctc
ttgtcccagcgtaatcccaccaagcccgccccgcagacctccacctcttccagcccctcc
tcaggactccagagcgccaacactaccagcaccaactcttcccagcctgcacaggtcaac
agcacccctccctcctcctcctcctccttgtcgtcctcgtcttcatcatcgggctctcag
actaacggagcgatggcctcgggcaagccgggttcctacatgccgtttgggacgggcggc
ctgcagggcagcactactcagaacggaccgcagacgaactcgcaaggcgctggtgacaac
gcatccagccagcctcaggtctccgcggagacgcaggagagcacaatggagagggacaaa
gtgggcaagccgacagacggagagtcccacgccgtctcgtacccgcctgccatcgtggtc
tacatcgtcgaccccttcagctacgagaacgcggacaaagaggtccactccagcacttac
accgtgggcctgctgcgctgcttcatggagatgctccccttcctgccggctcacatcaga
aacgccgtctccgtgcagattgttccctgccagtacctgctgcagccggtgcacagcggc
gaccgccacatctacagccagcacctcaagtcgttggccttctccgtgtacacccagtgt
cgccggccgctgccgaactccaccaacttcaaggccttgacgggcttcgggcccggcctc
gctcttgacatggccctcaagaacccggagcggccggagtgtctccgtctgtacacgccg
tccttcattttggccccggtgaaagacaagcagactgagctcggggagacgtttggcgag
gcgtcgcagaagtacaacgtgctttttgtcggctactgcctgtcccacgaccagcgctgg
ctgctggcgtcctgcaccgaccagcacggcgagctgctggagtcctgcatcatcagtatt
gatgttcccaacagggctcgcaggaaaaagagctctgccagacgagtgggcctgcagaag
ctgtgggagtggtgtgtcggcctggtgcaggtgacatcactaccgtggagggtggtgatt
ggacggctcggcaggatgggccacggcgagctaagagactggagcattctgctgagtcgg
acaaacctgcagtctctcagcaagcgtctgaaggagacgtgtgggatgtgcggcatctcc
gctgccgacacgcccagcatcctgagcgcctgtctggtcgccatggagccacaggggtcc
tttgtgatcatgccagactccgtgtcgaccgggtcggtgttcggtcgcagcaccaccctc
aacatgcagacgtcccagctgagcacgccgcaggacacgtcctgcacgcacatcctggtg
ttccccacgtcggccatggtgcaggtcaacactaacacctcggagcccatcgacatcagc
ttcaaccacatcaaccccgacggatccgaggggatgggattctttgagctgtttggcagc
gacatggatccagagctcatcaacatcctgcccaactccccgacgacctcgcccgtccac
tctccgggacaccactaccaccacggagaagcgggcaagggccagggtgcggatcggatg
gagtcccacgaggaggctctcagcatcctgcagcagcccatggctctgggttacttcatc
tccacggcgaaggccgggccgctgcccgactggttctggtccgcctgtcccgaagcccag
aatcagtgtccgctcttcctcaaggcatctctgcacctggtgtcttcggtccaatcagac
gagctcctgcacagtaaacactcccaccctctggactctaaccacacctccgacgtgctc
agatttgtcttggagcagtacaacgccctctcctggctgacgtgtaaccccgccacccag
gaccgacgctcctgtctgcctgttcacttcgtggtgctcacacagatctacaacttcatc
atgaacatgctctga
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