Gambusia affinis (western mosquitofish): 122833145
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Entry
122833145 CDS
T07758
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122833145 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122833145 (exosc5)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122833145 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122833145
NCBI-ProteinID:
XP_043976427
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All DBs
Position
LG06:complement(4670531..4673637)
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AA seq
236 aa
AA seq
DB search
MTSFSCDKHRLHREGGMMEVSPSSSVSLREFGCEQTLLSRPDGSASFVQGDTSVMAGVYG
PAEVKISKEIYDRATLEVLVHPKVGLPGVRERSQEQCVRETCEASLLLSLHPRSSLTLVL
QVLHDDGALLSCCLNAACMALMDAGLSMSCLFCGVTCAISADGEIITDPTAAQEKESRAL
MTFAIDSKERRVMMSSTKGSFSVHELQQCVAVSQKASEKIFQFYRESVRRRYSKNL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatttagctgcgacaaacatcgtctccaccgggaaggcggcatgatggaagtc
tctccttcttcaagtgtttctctcagagagttcgggtgtgaacaaaccttactgtcccgt
cctgatggatcggcttccttcgttcagggagacaccagtgtgatggcgggagtctacgga
cctgctgaggtcaaaatcagcaaggaaatctacgaccgggcaaccctggaggttctggtt
catcccaaagtgggactgccgggtgtgagggagcgatcacaggaacaatgtgtgcgggaa
acgtgtgaggcgtctctacttttatctctccatcctcgctcgtcgctcacgctcgtcctg
caggtgctgcacgacgacggcgctctcctgtcctgctgtctgaacgcagcctgcatggct
ctgatggatgccggcttgtctatgagttgcctgttttgtggcgtgacctgtgccatcagc
gcagacggtgaaatcatcacagacccgactgcagctcaggagaaggaaagtcgagctttg
atgactttcgccatcgacagcaaagagcgcagagtgatgatgtcatcaaccaaaggctcg
ttctcagttcatgagctgcagcagtgcgtagccgtcagtcagaaagcgtcagagaagatc
ttccagttctacagagaatccgtcagacgccgatactccaagaacctttga
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integrated database retrieval system