Gambusia affinis (western mosquitofish): 122833157
Help
Entry
122833157 CDS
T07758
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122833157 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122833157 (scarf1)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Phagocytosis
Scavenger receptors
122833157 (scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_2
Prominin
Motif
Other DBs
NCBI-GeneID:
122833157
NCBI-ProteinID:
XP_043976441
LinkDB
All DBs
Position
LG06:complement(19496082..19503967)
Genome browser
AA seq
897 aa
AA seq
DB search
MRFLRALSALLCCSLSSAQTLDPGGKNVCKDSRDSSSLVCCTGWRQQGKECTIPVCEGEQ
ACLENEVCIFPGVCRCPPGFYGAQCKTECPLAFWASDCRQVCPCYPHGRCHPVTGECTCY
PTRWGPLCQNTCKCTGNGHCHRVNGKCICNKGWWSQMCSKPCQCSSGGSVDSSCDPLTGR
CQCHRGYWGMKCQATCHCNQSPCNERTGVCECEAGSWGPSCDRNCNCDLSHSSCDPASGQ
CLCHPGYMGASCSRPCEAGYYGSSCTMRCGSCKDKRPCSSTDGACAACEPGLNGTRCDQP
CAAGFYGEGCNDKCPRCWNNEPCEPKTGKCWRCDPGRTGTRCEEPCSDGTYGDACRFLCG
PCSHGNCHHVTGRCVCQPGFQGESCNNTCPAPLFGLNCSSVCDCGEGVGCHSVTGACPYS
GRGAVLAGVLVPLFLLFFAVLCCCLCCGGGPTDSKNSAAVADGSMLVRMKYHVYSVLANI
GAALPCMSDWSSGLPRVTVSHHDPEVTFNHSFIEPPSSGWVTEGSSFDSDEEEGEALYCV
PPREDILAVAGGEFQEMSSKCNMFLDPSGFSSEDIASSFNIPRTSSNAKSKRPSVSFAEG
TRFSPKERRGSGQEPGAPPRNKAKTPWGVLMLSALQSQGGTARTGEEDGAEEEERGDGEE
GQAAEMQESSCEVVEQEVDSSPNLQVPGASGRRRTMSNTAAHKGTPLLNSEGEAGALHKV
TTVYVTVGKAGRPVTKAESSSEGPVQAMLRRLGSLQRQKEQDGGKSKSKAAEGIAKPPRR
KLGARAAVWEQGGPSGGEAKPVRRKNASSGASEAPPSEGSTPKRPLSSILKSVPEVTVNG
SGLRVEGRAVQGVDAAAGQTECSYLTVGPTGEATQAINNEGAANDEPCYENVLISQP
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttctcagagctctgagcgctttgctctgctgctcgctgtcctctgcacagaca
ctggatcctggtgggaaaaatgtctgcaaagattcaagggactcctccagtctggtctgt
tgcaccggatggcgtcagcagggaaaagagtgcaccatacctgtctgtgaaggtgaacag
gcgtgtcttgagaatgaagtctgtatatttcctggagtgtgtcgctgcccacctggcttc
tatggagctcagtgtaaaacagagtgtccactggcgttttgggcctcagactgccggcag
gtgtgtccgtgctaccctcatggccggtgtcatcctgtcaccggcgagtgtacgtgctac
cccacccgctggggtcccctttgccagaacacctgcaagtgcactggcaacggccactgc
caccgtgtcaatggaaaatgcatctgcaacaaaggctggtggtcccagatgtgctccaaa
ccgtgccagtgctccagcggtggctccgtggactccagctgtgacccactaacaggccgc
tgccagtgccacaggggctactggggcatgaagtgccaggccacgtgccactgtaaccag
tctccgtgtaacgagcggaccggggtgtgcgagtgcgaggcaggctcctgggggcccagc
tgtgacaggaactgtaactgtgacctctcacacagcagctgtgacccggcctctgggcag
tgcctctgtcacccaggttacatgggtgcttcatgcagccgtccttgtgaagctgggtac
tatggcagcagctgtacaatgagatgtggttcctgtaaagacaagcggccgtgctcgtcc
accgatggtgcctgcgctgcctgtgaacccggcctgaatggcacacgatgtgaccagccg
tgcgctgctggtttctatggagaaggctgcaacgataagtgtccgcggtgctggaacaat
gaaccctgtgagccaaaaaccgggaaatgttggagatgtgaccctggacggaccggaacc
aggtgtgaggagccctgctcagacgggacatatggggacgcctgccgcttcctgtgcggt
ccctgttcccatggtaactgtcatcatgtgacaggaagatgtgtctgtcagccaggtttt
caaggagaaagctgtaacaacacctgtcccgctccgctgtttggcctcaactgttcgtcc
gtctgtgactgtggtgaaggagtcggctgccactccgtcactggtgcttgcccctacagt
ggtagaggtgctgtgctcgcaggcgtgctggttcccttgttcctgctgttttttgctgta
ctgtgttgctgcctgtgttgcggaggaggtccaactgacagcaaaaacagtgcggctgtg
gctgatggcagcatgctggtcaggatgaaatatcacgtctacagcgtcctggcgaacatc
ggcgctgccctcccctgcatgtcggactggtcctccggcctgcctcgagtcactgtgtct
caccacgacccagaggtgactttcaaccacagcttcatcgagcctccctcttctggctgg
gtcaccgaggggtcgtccttcgacagtgacgaagaggagggcgaggctctctactgcgtt
cctccaagagaagacatcctggccgtggcgggtggggagttccaggagatgagctccaag
tgcaatatgttcctggacccgtccgggttcagcagcgaggacatcgcttcgtccttcaac
atccctcgcacctccagcaacgccaagtccaagaggccgtccgtgtcatttgcagaaggg
acgcgctttagtcctaaggagaggcgtgggtccggtcaggagcctggtgctcctccgcgt
aacaaagcgaagaccccctggggggttctgatgctgtccgccctccaaagtcagggaggg
acagctagaactggggaggaagacggagctgaggaagaggagaggggagatggggaagag
ggtcaagcagcagagatgcaagagtcgagctgtgaggtggtggaacaggaagtagacagc
agcccgaatttacaagtccctggggcgtcagggcgaaggcggaccatgtccaacacagct
gctcataaaggaacgccgctgctcaactctgagggcgaggcaggggctcttcataaggtt
accacggtgtatgtgacagtcggtaaggccggcaggcctgtgacaaaagcagagtcgagc
tctgaaggaccggtccaggccatgctgcgcagactcggcagcctgcagagacaaaaggag
caggacggcgggaaatccaagtcaaaggcagccgaggggatcgccaaacccccgaggagg
aagctgggagctcgggccgccgtgtgggagcagggagggccgtcgggaggcgaggccaag
ccagtcaggaggaagaacgcctccagcggcgcttcagaggctcctccatcagaggggagc
acgccaaagcggcccctgtcgtcaatcctgaagagcgtcccagaggtgactgtcaacggg
tcaggtctgagagttgaaggaagagccgtgcagggtgtggatgcagctgcagggcaaaca
gagtgcagctatctgaccgtgggaccaacaggagaggcgactcaggccatcaacaacgag
ggagcagcaaacgacgaaccctgctatgaaaacgtcttaatctctcaaccataa
DBGET
integrated database retrieval system
