Gambusia affinis (western mosquitofish): 122833190
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Entry
122833190 CDS
T07758
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04270
Vascular smooth muscle contraction
gaf04625
C-type lectin receptor signaling pathway
gaf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122833190 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122833190 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
122833190 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122833190 (arhgef12a)
Membrane trafficking [BR:
gaf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122833190 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
122833190
NCBI-ProteinID:
XP_043976513
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All DBs
Position
LG06:complement(20555993..20611673)
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AA seq
1433 aa
AA seq
DB search
MSDPQFSSTDRFTKKAIRTSSILSKDHPPDKKPKSDKASLPSNEFDPTEALVVEKSGNNS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHTEVVKLIKSGSYVALTVLGRPPGLAQIPLPEAEPDILAVSISSPNSPAT
ERPYSPQDRLSPFQSSWEENGSACNQRSDVLQKKLSKEQQDLQAMKEEYSRNPSPKLLKD
IQEAKKHIPQLQGQLLKSTETTQEAVSCGDADDSSMYETDHAHTPKADNSTDLSWSSTPI
FRPATPESHCPKELSYPSPKSTPRNSFNSCHSPETEDTTDLDSFSPSALSSPSSSRVISQ
IIGAEDDYFGRDQEQTNGQCDSFNSIDQLKSRPAHLAAFLHYVISLFEPAPVLCYLYTEL
YKQTNSKETRRVFMDLHNFFMDRGANLKVPVPESVSSDLDRRRTELIPEEINKQHVQTLQ
DSLLADVEKHLEDFRQKRNMGLTVAEAELARLDQERVRDRVTLERERSYAENIISKIDDI
LLTTQTTEEDKCTTIQLVIYTYMKHLGVRVKEPRNLESKRGLNRLFPKMKQKSIKTDKEV
DDRLKKKFLNLVPQRRPSRIETAGKNLENRPRPQKQLSQPTLGAVELMDNSRLRGSQSSE
GPELTHSLSVSSPSNTTHSVDASRDADIVSGGTPTSAPSRLSDGLQADPLDGLAFPDSTE
LYPMEKLQEDDRESDRAHDGTPKTVRRLEALGIGDVQSEDDQGTDSELDPHNWQQLVGRE
VLAGLRPQEIKRQEVINELFYTERAHVGMLKVLDDVFYQRLSKDAILPPADIKNIFANLE
EVLQLHVSILEQMAAIRRRNDSLVIDLRGDDLLSWFSGAEEEKIKLAVGTFCSNQPFALE
IIKTKQKKDSRFTSFIQEAESNRQCRRLQLKDIIPVEMLRLTKYPLLIDNIVKYTDDPVE
KHKVKQAADCCRKILSHVNQALKESEDKQKLEDYQRRLDLSSLKQTDNPVILELKNLDLT
KKTLIHEGVLSWKMNKDKTIELYTLLLEDIIVLLQKQDERLILKCHSKILAGTPDTKHTF
SPIIKLSTVLVRSVATDNKSFFVLSMSDNVAQIYELMAPTVSDQKTWQTLISQRADTMKV
KPHSIIPLPQTDGERDGVEIITAGVNRLSREQDRTSTGSTQSTDKESGPPSKSTPQGSPP
AGNPFEEVKADVEEEEGFLDPELLCEVSEVDREGDSFDVFPSRADEALKTLAALKQVLVN
QLMSQEAAQQTKRSTGVRLLRTTSLRTPTDNRAKVMVHNGSEKSSSKAEDLAQDLGSGDT
GFFDSPEDYGCLVLESYGGQGESSTDDDILASTQGKQLRTSQGCAADSGINLRFSSTSQF
GSLSTFSRQVLSHLRHLQTSLGYLKDVETKYNNLIRQRTDGSSTDTDGNKEKR
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccacagttcagttccactgacaggtttaccaagaaagcaataagaaccagc
agcattctcagtaaggaccatcccccagacaagaaacccaaaagtgacaaagcttcactt
ccctccaatgagtttgaccctacagaagctctggtggtggagaagagtggcaacaacagt
gtgcttgcagagggaaagcctgaatcctgtggtctggtccagcgatgtgtgatcattcag
aaagatgaaaatggctttgggcttactgtcagtggtgacaatcctgtgtttgtgcagctg
gtcaaagaagatggggctgcaatgcgggcaggtgttcagacgggagacaggatcatcaag
gttaacgggaccctcgtcacacattctaaccacacagaagtagtgaaacttatcaaatcg
ggttcctacgtggcgctcacggttttggggcgccctccaggactagcccagatcccgttg
cctgaagcagagcctgacatcttggctgttagcatatcctctccaaactctccagcaaca
gagcgcccttacagtcctcaggaccgcctctcccccttccaatcatcatgggaagaaaat
ggcagtgcctgcaaccagaggtctgatgtcttgcaaaagaagctctcaaaagaacagcag
gatctacaggcaatgaaagaggagtacagcaggaacccctcccccaaactactgaaggac
atccaggaagctaaaaaacacattcctcagctgcagggtcagctcttaaagtccactgaa
acaacacaggaggctgtttcatgtggcgacgcagacgacagtagcatgtacgaaacggat
cacgcacacacccctaaagcagacaatagcacagatctatcctggagcagcactcctata
tttaggccagcgactccagaaagccattgtcctaaagaactctcctaccccagcccaaag
agcacaccccgaaacagcttcaactcctgccactccccagagacggaggacaccactgac
ctggactctttctcgccttccgcactcagcagtccctcctcttctcgcgttatctcgcaa
atcattggagcggaagatgactattttggtcgagaccaagagcagacaaacggccagtgt
gacagctttaacagtattgaccagctcaagtctcgtcctgctcacctcgcagcctttctg
cactatgtcatctctctgtttgagcctgctcctgtgttgtgctacctctataccgagctc
tacaagcagaccaactccaaagagacccgacgggttttcatggacctccacaattttttt
atggaccggggagcaaatttaaaggttcctgttcctgaatctgtttcctctgatcttgat
cggcggcggacggagctgataccagaggaaataaataagcaacatgttcaaacactgcag
gactctctgctggctgacgttgagaaacaccttgaagattttaggcagaagcgcaatatg
ggcctaacggtggctgaagctgagctggccagactggaccaagagagagtccgagatcgt
gtcacgcttgagcgagagcgttcatacgctgaaaacatcatatctaaaatagatgatatt
cttttaactactcagaccacagaggaagacaaatgcactacaatacagttagttatctat
acatacatgaagcacctcggtgtgagggttaaggagcctcgaaatctggagtccaaacgg
ggtctgaaccgtcttttccctaagatgaagcagaaaagtattaaaacagataaagaagtt
gatgacagattaaaaaagaaatttttaaatcttgtacctcagcgtcgacccagccgcatc
gaaacagcaggcaaaaacctggaaaatcgccccaggcctcagaaacagctgtctcagcca
acgctaggagcggttgagctaatggataacagtcgtctgaggggcagccagtccagtgag
ggccccgaactcactcattccttatctgtgtcatctccaagtaacaccacccacagtgtg
gatgccagccgagacgctgatattgtttcaggtgggactccaacatcagccccctccagg
ctgagtgacggtcttcaggctgatcctctggatggattagcattccctgattcaactgag
ctttatcccatggagaagttacaagaagatgacagagaaagtgacagagctcatgacggg
acaccaaagacggttagaagacttgaggcattgggtattggagatgtccagagcgaggat
gatcaggggacagactctgagctcgatccccacaactggcagcagctggtgggacgagag
gtccttgcgggactcaggcctcaagagattaagagacaagaagttataaacgagttgttt
tatacagagcgtgcacatgtagggatgctgaaagttctggatgacgtcttctaccagagg
ctgtccaaagacgcaatccttcctcctgctgacatcaagaacatcttcgccaacctggaa
gaagtcctgcagctgcatgtttcaatacttgagcaaatggcagccatacggaggagaaat
gattcgttggtaatagatcttaggggggacgacttgctctcgtggttcagtggtgccgag
gaggagaagatcaagctggcagtgggaacattttgcagtaaccagccgtttgcactggag
attatcaagaccaagcagaagaaagactcgaggttcacctcattcattcaggaagcagag
agtaacaggcagtgtcgaagactgcagctaaaggacataattcctgttgagatgctgcgg
ctcaccaagtaccccctgttgatagacaacattgtcaaatacacagacgatccagtggag
aagcacaaagttaagcaggcagcagactgctgcagaaagatccttagtcacgtcaaccag
gctttaaaagagtctgaggacaaacagaaattagaggactaccagaggagattggacctc
tcctctctaaagcagacagataacccagtgatccttgagctaaagaacctggatttgacc
aagaagacactgattcacgagggtgttctatcatggaaaatgaacaaggacaagactatt
gagctgtacacgctcctcctggaggacataattgttctgctacagaaacaagacgagcgt
ctgatcctaaaatgtcacagcaaaatcctggcaggcaccccagatacaaaacacaccttc
agccccatcattaaactcagcactgttctggtgcgctctgtggctacagacaacaagtcc
ttcttcgtcctctccatgtctgacaacgttgcgcagatctacgagctcatggcgcccaca
gtctcagatcagaaaacgtggcagactctgatctcccaaagagccgatacgatgaaggtc
aaacctcacagcatcataccgttacctcagactgatggggagagagacggcgtggagatc
attacagcaggtgttaacagactgagcagagaacaagaccgcacatccactggcagcacg
cagtccacagataaagagagcggcccgccctctaaaagtaccccgcaaggttctccacct
gctggtaacccgtttgaggaagtaaaggcagacgtggaggaagaggaaggttttctggac
ccagagcttttgtgtgaagtatctgaagttgacagagaaggagactcgttcgatgtgttc
ccctcaagggcagacgaagcactaaaaacattggccgcattaaagcaagtcctggtgaac
cagctgatgtcccaggaggcagcacaacaaaccaaacgttccacgggagtccgtctgcta
agaaccacctctttgcggacgccgacagacaaccgcgcaaaggtgatggttcacaacggc
tccgagaagagcagctctaaggcagaggacctggctcaggacctggggtcaggggacact
ggattctttgattctcctgaagactatggatgtttagtcctggagagttacggaggacaa
ggggagagcagcacagacgacgacatcctggcatcaacccaagggaaacagctgaggacg
tcacaaggctgtgcggccgactccggcatcaatttgagattttcttcaacgtcacagttc
ggcagcctctccactttcagcagacaggtgttgtctcatcttagacatcttcagaccagc
ctcggctatttaaaggacgttgagaccaagtacaataatctaatacgccaaaggacagat
gggtcatcgacagacacagatggaaacaaagaaaaaagatag
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integrated database retrieval system
