Gambusia affinis (western mosquitofish): 122833240
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Entry
122833240 CDS
T07758
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122833240 (npas1)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122833240 (npas1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
122833240
NCBI-ProteinID:
XP_043976608
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Position
LG06:complement(21815750..21907212)
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AA seq
805 aa
AA seq
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MASMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLLEGDNNCNKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIKPHLRAEAGCHVAPDSASSTASASSLAGTPEPAGPSSPHSAADDPPERGF
FIRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSVRRPMGLVALAHTLPPST
LNEVRMESNMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFVHVEDLENIRQSH
EDLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTEMPDTP
LDLLQLPESIRAERLRVSSSPSDGSPQARGQPPVKTVGKSDPDSKGREKFAAPAVQSEER
RKRLLRSDHEGAPPESRRRLEELRHTEEVVSASSDLASESEGDEEEEPEWEQGGDSDRLK
QEDSGGGGKQGRGGDAPTGGDRAGRVHNGRAVIQQLKSVVAPSTLPQSPTIKTEHDVLST
GGRWGSHTHASQPQPTHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSPALSPAM
SVSSPQPREDRVVSGIVSRGAAGGGTGNGPDFELLQRLAGGAAGRVLFHPLALGPQGPQS
LYAPSTIRYAPPELPPSHHHGGGHGDSLQLRSDHHKGPPPTFFPHLQRLAGLPPFSGFSP
SDSPFSSSLPFCMNGLRGAAGTEED
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcatgccgtttgtcagcgaggggaaatgtgtgagtgtggagtgggatttcctt
caaggacttctcgccaaacctcctacactaccctgtctccagaacctgcgtaaagagaaa
tctcgcaatgcagctcgttctcgacgggggaaggagaactttgagttctttgagttggct
aagatgctgcctttgccaggggccatcacgagtcagctcgacaaagcgtcagtcattcgg
ctgactatcagctatctacacatgcgcacctttgcaagtcaaggagacccaccgtggagc
cctctgctggagggagacaacaactgcaacaaagttagacgatcatcccattctctggcc
actgatatgtttgagcagcaccttggggctcacctcctgcagtctctggatggctttgtg
tttgtggtcagtcaggagggacgtttcctctacatctcagagacagtttccatctacctg
gggctctcacaggtggagctgaccggcagcagcgtgttcgactacatccacccggcggac
cacgtggagatggccgagcggttggggatcaaaccgcacctgcgggccgaagccggctgc
cacgtcgcccccgacagcgcctccagcaccgcctccgcctcttcactagccggtacccct
gagcctgcaggtccctccagtcctcattctgctgctgacgatcctccagaacgtggcttt
ttcatccgaatgaagtccacactcaccaaaagaggcctgcatgtcaaatcctccggatac
aaggtcatccatgtgaccggtcggatccgctgccgccccgcactcgtcccgggttccacg
cgctcagtccgtcgcccgatgggcttggtggctctcgcgcacacgctcccgccctccaca
ctcaacgaagtccgcatggagagcaacatgtttgtcttccgagtgaacatggacttgcag
gtcacatattgtgaaaacaggatctcagagtatatggatctgaccccagcggaagtggtg
ggacatacctgttatcatttcgtccatgtggaagatctggaaaatatccggcagagccac
gaggacctgctgaggaaaggccaggtggtgacgggctactaccgctggcttcagaggaga
ggaggttacctgtggatccagtccactgccactgtctccatcaatcacaaagccccccat
gagcgtaatgtcatctgggtgaactacgtcctgagtcgaactgagatgcccgacactccc
ttggatctgctgcagctaccggagagcataagagcggagagacttcgagtcagctcgtcc
cccagcgacggctccccacaggcccgaggtcaaccaccggtgaagacagtcggaaagagt
gaccctgacagcaaaggtagagaaaaatttgctgcccccgccgtccaatcagaggaaagg
aggaagcgcctgctaaggtccgaccacgagggagcgcctcctgagagccgccgtcgcctg
gaggaacttcgacacacggaggaagtggtgtcagcctcctcggacctcgcaagcgaaagc
gaaggcgatgaggaggaagagccggagtgggagcaggggggcgacagcgacagactgaag
caggaagacagcgggggagggggcaaacagggcagaggaggggacgccccgactggaggg
gacagagcgggccgggtgcacaacggccgggccgtcatccagcagctgaaaagcgtggtg
gcaccgtccaccctgccgcaaagtcccaccatcaagactgaacacgacgtcctgtccacc
ggagggcgctgggggtcccacacgcacgcctcacagccccaaccgacgcacgcgcacaca
ccgtccagcagcctgaacggcgacagccccaccaccccaatcccggattcctcgtccagc
agcgaggcgccgccaaagggcctgttcacccctccgtctcccgccctgtcccctgccatg
tccgtgtcctccccacagccccgcgaggacagggtcgtctccgggatagtgagccgcggc
gctgcgggcggcggcaccggaaacggccccgactttgagctgctccaaagactggcgggc
ggcgcggcgggacgggtcctcttccaccccctcgccctcggcccgcagggccctcagagc
ctctacgcccccagcaccatccgctacgctccaccggagctgcccccctcccaccaccac
ggtgggggccatggcgacagcctgcagctacgctcggaccaccacaagggacccccgccg
accttcttcccgcacttgcagcggctggccgggctgccacccttcagcggtttctcaccg
tctgacagccctttctcctccagcctgcctttctgtatgaacggactgaggggggccgcg
ggcacggaggaggactga
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