Gambusia affinis (western mosquitofish): 122833275
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Entry
122833275 CDS
T07758
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122833275 (smc4)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
122833275 (smc4)
Condensin II
122833275 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
WEMBL
AAA_29
DUF7713
DUF1482
Motif
Other DBs
NCBI-GeneID:
122833275
NCBI-ProteinID:
XP_043976666
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All DBs
Position
LG06:complement(23328020..23349789)
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AA seq
1299 aa
AA seq
DB search
MPSKTAKTSTASKREPKRKGLQPRDDSEDELDVPPQETNSNGQEEAPPTTDPSQGEATEA
VDSRSLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKRFSCII
GPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQKIIDKEG
DDYEVVPNSKFYVSRTANRDSSSYYHIDGKKATFKEVGTLLRSHGIDLDHNRFLILQGEV
EQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPIQTLSRRIELLNEQRGEKLNRVKLVE
KEKNALEGEKNKALEFLTLENDIFKQKSQLHQYYVHDLRKRVTDKEQEKQKILEETKELT
EKNAKISEEMEKMNQELQNVEKKKNKINKYIETQKGKFTQLDLQDVEVREKIKHSKSKNK
ALQKQLEKDQKKLEEVRGIPASSEQAISEATAQKEDLEKQKAKEEEKLKVVMESLKEETS
GLQQDKEKKENELMELSKAVNETRSQMDIAQSELDIYLSRHKTALTQLNAAKQTLQTTSD
TLQERRPAIKELQAQIPLKEKELRKDQEELEQLLKVDNDTRHVVRELQQKVDEAKSSLSS
NRSRGKVLDALMQLKKSGKIPGIYGRLGDLGAIDEKYDVAISSCCGALDNIVVDTIDTAQ
KCVTFLKEQNIGVATFIGLDKMKVWEKNMTSIRTPENSPRLFDMVRVNDERVRPAFYFAL
RDTLVAQDMEQATRMAFQKDKRWRVVTLKGQIIEMAGTMTGGGRVMKGRMGSSIGQELSQ
DELDRMESKLNEKVSKLHGCQERRLQLEENVQRLQPQLREMKNTLEKYTNSMSSLADQET
HLKLQIKELEANVLAAAPDKAKQKQMEKSLEAFKKDFESASSKAGKVENEVKRLHNLIVD
INSHKLKAQQDKLDKINKELDDCSSVITKAKVAIKTADRNLKKCEESIARVQAELEENGK
LMAELTERLKKLEDEAGEIMKGCHEAEATLPEVQEEYQNVSKAIKALQQQEHALQEESLN
VRLTIEQIDAAITKHNGKIKYWQDESTKLSLHTIDGQPAEELCVFPPAELEAISDPNVLV
NKISVLESQCSQMKPNLGAIAEYKKKEELYLQRVAQLDEITADRDRFKHAYEDLRKQRLN
EFMTGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSG
GEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRN
NMFEIADRLIGIYKTHNTTKSVGINPKTIVFREHDAITA
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaacagcaaaaacctccactgcctccaaaagggagccaaaaaggaaaggg
ctgcagcctcgggatgactctgaggacgagttggatgtaccccctcaagaaaccaactcc
aatggccaagaggaggcaccgccgacaactgatccgtctcagggggaagctactgaggcg
gttgatagtcgaagtttggaggagattctcggcagcatccctccacctccgcccccagca
atgaccaatgaaccgggcgctcctcgcctgatgatcacacatttagttaatcgcaacttt
aagtcttatgcaggggagcagattctggggccttttcacaagcgcttttcctgcatcatt
ggtcccaatggaagtggaaagtccaatgtgatagattcaatgctctttgtgtttggatac
agagctcaaaagatcagatcgaaaaagctctcagtgctgattcacagctctgataaacac
aaggatgtgcaaagctgtactgtggaggtgcattttcaaaagattattgataaggaagga
gatgactacgaagtcgtccctaacagcaagttctatgtttccagaactgccaacagagac
agttcctcttactaccatatcgatggcaaaaaggccactttcaaagaagttggcacttta
ctccgcagccacggtattgatctagaccacaacagatttctgatcttgcagggtgaggtg
gagcagattgccatgatgaagcctaaaggtcagacggagcatgatgaggggatgctggag
tacctggaggacatcatcggttcttgccgtctcaaagaaccgatccaaactctttctcgc
cgcatcgagctgctcaacgagcaaaggggagaaaagctgaatcgagttaagctggttgaa
aaggagaaaaacgctttggagggggaaaagaataaagccctggagttcctcaccttggag
aacgacatcttcaaacagaagagccagctccaccagtactatgttcatgatctacgaaaa
cgtgtgactgataaagaacaggaaaagcaaaagattttggaggaaaccaaggagctcact
gaaaaaaatgcaaagatatcggaagagatggaaaaaatgaaccaagagctccaaaatgtg
gaaaagaaaaaaaataagatcaacaagtatattgagacccagaagggaaagttcacgcag
ctggacctgcaggatgttgaagtgcgtgagaagatcaaacactcaaagagcaagaacaag
gccctgcagaagcagctggaaaaagaccagaaaaagctggaggaagtgcgaggcataccg
gccagcagcgaacaagccatctctgaagcgacggcccaaaaagaagacctggagaagcag
aaagcgaaagaagaagaaaaactgaaagtagtgatggaaagtctgaaggaagagacgagc
ggcttgcaacaggacaaagagaaaaaagagaacgagctcatggagctcagcaaggccgta
aacgagacgcgctctcagatggacatcgctcagtccgagctcgacatctacctgagccgc
cacaaaacggctctgacgcagctgaacgcggccaagcagacgctccagacgacctcggac
actctgcaggagcgccggcccgccatcaaagagctgcaggcccaaatccccctgaaggaa
aaggagctcagaaaggaccaggaagagttggaacagctgctgaaggtggataatgacacc
aggcacgtggtgagagaactgcagcaaaaggtggacgaagccaagagctccctgtcctcc
aatcgcagtcgaggaaaagtcttggacgctctgatgcagctcaagaagagcggcaaaatc
cctggaatctacggaagattgggagatcttggagccatagatgaaaagtacgatgtggcc
atttcgtcctgctgcggcgctctggacaacatcgtggtggacaccatcgacacggctcag
aaatgcgtcactttcctcaaagagcaaaatatcggcgtcgccactttcatcggcctcgac
aagatgaaggtctgggagaagaacatgacttccattcgaacgccagagaacagcccccgc
ctcttcgacatggtgcgagtaaacgatgagagggtcagaccagcgttctacttcgccctg
agggacaccctggtcgctcaggacatggagcaggccaccaggatggccttccagaaggac
aaacgctggagggtggtcaccctgaaggggcagataattgaaatggcaggaacaatgact
ggaggtggaagagttatgaaaggcaggatggggtcttctattggccaagagctgtcccag
gacgagctcgaccgtatggagagcaagctgaatgagaaagtgtcaaagctgcacggctgc
caggagagacggctgcagttggaggagaacgtccagcgcctgcagccccagctcagagag
atgaagaacactctggaaaaatacacaaacagcatgagcagtctggctgaccaggagact
cacttgaaacttcagattaaggagcttgaagccaacgtgctggcagctgccccagacaaa
gccaagcagaaacagatggagaagagcctggaggcattcaagaaagactttgagtcagca
tccagtaaggccgggaaggtggaaaacgaggtgaaaagactccacaacttgattgttgac
atcaacagccacaaactgaaggctcagcaggataagctggacaagatcaataaagagctg
gacgactgctcgtccgtcatcaccaaggccaaagtggccataaagacggctgatcgaaac
ctgaaaaagtgtgaggagagcattgctcgtgtgcaagcagagctggaagagaacgggaag
ttgatggcggagctcacagagcggctgaagaaactagaagatgaggcgggggagatcatg
aaaggctgtcacgaggcagaggccactctgcctgaggtgcaggaggagtatcagaacgtt
tccaaggcgatcaaggccctgcagcagcaggagcacgcactgcaagaagagtcgctcaac
gttcggctgaccatcgagcagatagacgccgccatcacaaagcacaacggcaagatcaag
tactggcaggatgagagcaccaagctgtcccttcacaccattgacggccagccagcagag
gaactctgtgtctttccccctgctgagctggaagccatttcggatccaaacgtcctggtg
aacaagatcagcgtgctggagagccagtgtagtcaaatgaagcccaatctgggagccatt
gcagagtacaagaagaaggaggagctgtacctgcagcgcgtcgcccagttggacgagatc
acagcggacagagacaggttcaagcacgcctacgaggacctccgtaagcagcggctcaac
gagttcatgaccgggttcaacatgatcaccaacaagctgaaggagaactaccagatgctg
acactaggtggggatgcagagctggagctggtggacagtttggatccgttctctgaggga
atcatgttcagtgttcgtccaccaaagaaaagttggaaaaagatctttaacctgtcagga
ggggagaagaccctcagctctctggctctggtgtttgctctgcatcactacaagcccacc
ccgctgtacttcatggacgagatcgatgccgcgctggacttcaagaacgtctccatcgtc
gcctgttatatttatgaacagacaaagaacgctcagttcatcatcatctccttgaggaac
aacatgttcgagatcgccgatcgtctcatcggcatctataaaacgcacaacacaaccaaa
agtgtcggaatcaatcccaaaacaatcgtgttcagagaacacgatgccatcacggcataa
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