Gambusia affinis (western mosquitofish): 122833388
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Entry
122833388 CDS
T07758
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04010
MAPK signaling pathway
gaf04020
Calcium signaling pathway
gaf04218
Cellular senescence
gaf04260
Cardiac muscle contraction
gaf04261
Adrenergic signaling in cardiomyocytes
gaf04270
Vascular smooth muscle contraction
gaf04530
Tight junction
gaf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122833388 (cacna1da)
04020 Calcium signaling pathway
122833388 (cacna1da)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
122833388 (cacna1da)
09144 Cellular community - eukaryotes
04530 Tight junction
122833388 (cacna1da)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
122833388 (cacna1da)
09153 Circulatory system
04260 Cardiac muscle contraction
122833388 (cacna1da)
04261 Adrenergic signaling in cardiomyocytes
122833388 (cacna1da)
04270 Vascular smooth muscle contraction
122833388 (cacna1da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122833388 (cacna1da)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122833388 (cacna1da)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
FAM176
YVC1_C
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
122833388
NCBI-ProteinID:
XP_043976779
LinkDB
All DBs
Position
LG07:10062284..10136550
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AA seq
2134 aa
AA seq
DB search
MSANGPAPEPAPEAPPISTPAPASAPTPAPAPAPPPPAPPAPTSSTIPVGALAQKKRQQY
AKSKKQGSNANSRPPRALFCLKLNNPLRRACISVVEWKPFDIFILIAIFANCMALAVYVP
FPEDDSNSINHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIG
LFSVVLEFLTKEDKGEGETDSTHPSTHGHGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQ
VVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYIGGTDLIAEDDPAPCA
ISGHGRQCPINGTQCREGWHGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAMG
FELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGY
LDWITQAEDIDPDNEDEAEEGSKRNRVTLADLTEKKKGRFGWFSQSSDTHASVPASETES
VNTENQNGEDEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFYWLVIILV
FLNTLTISSEHYNQPMWLTQVQDVANKVLLALFTCEMLVKMYSLGLQAYCVSLFNRFDCF
VVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMKSIASL
LLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYD
GIQAYGGPSSSGMVVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNTDEGDKKEDKK
DDDKDEKEEEEEDNDDNGGDEEDPEVPSGPRPVIADLVKKEKIIPIPEGSAFFIFSNTNP
VRVFCHQLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIILGYFDYAFTAIFTVEI
VLKVLGYADYVFTSMFTFEIVLKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQS
SAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGV
QLFKGKFYRCTDEAKSSPEECKGTYILYKDGDVNQPTIHRRVWHNSDFNFDNVLMAMMAL
FTVSTFEGWPALLYKAIDSNRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVT
FQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVL
IMLNTLCLAVQHYGQSALFNYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFADAWNTFDA
LIVVGSVVDIAITEVNPTETPQVDEMGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRT
LLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQTFPQAVLL
LFRCATGEAWQDIMLACMPGKLCDPESDYNPGEEMTCGSGFAIIYFITFYMLCAFLIINL
FVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGF
GKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIK
KIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVTAHPSQNNTA
IALQAGLRTLHDIGPEIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMNGGHRR
ANGHQTNTTQRPLQVQPPPHYAHMEQPVGRLSRANAMAHPNHHHHHHHNHHRHHNSYGKS
PKSTNINLNNANMSSLPNGGHHIYYERAPPNGYPGLRTSYYDYNKPRTPQGQRRRYYETY
VRSQRGDGHHPTIRREEEIDEDRFSGEYFSGEEFYEEDSMLSGDRYQTSDTEYETPKGYH
HPDSYYDDDEQPLYRDSRRSPKRRLLPATPQGHRRPSFNFECLRRQSSQDELPHQRTALP
LHLMQHQVMAVAGLDSSRAHCLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDRPHRES
ISGSHVSVRKSSWYTDDPEYSQRTYSPIHLQVPPEYHHQYHQKRGSATSLVEAVLISEGL
GRYAKDPKFVAATKHEIADACEMTIDEMESAASHLLSEGIAPGINGVNVFPLLAPRDYEL
PDTGASYSDEEPETEPRAPYEEDLADEMICITTL
NT seq
6405 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacgggcctgccccagaaccagccccagaagcccctcccatctcaacccct
gccccagcatcggcccctactccggccccagccccggcgccacccccgcccgccccacct
gccccaacatcctctaccataccggtaggtgcgttggctcagaagaagcgacagcagtat
gccaaaagcaagaagcaaggcagcaacgccaacagcaggccaccgagggctcttttctgc
ctcaaactcaacaaccccttacgcagggcctgcatcagtgtggtggagtggaagccattt
gacatctttatattaattgccatttttgccaactgtatggccttagctgtctacgtccct
tttcctgaagacgattccaactccataaaccacgatttggaaacagttgaatatgccttc
ctcatcattttcactattgagacctttctgaagattatcgcttatggtttggtgatgcac
cagaatgcatatgtgagaaatggctggaacatgctggattttgtcattgtggttattgga
ctcttcagtgttgttttggaatttttgaccaaagaagataagggagaaggtgaaaccgac
agtacccatccgtcgacgcatggccacgggggtaaacccggtggatttgacgttaaagcc
cttcgagccttccgtgtgctgcgacccctgcggctggtctcaggagtacccagtttacag
gtggtgttgaactccatcattaaagccatggttcctctgctgcacatcgccctccttgtc
ttgtttgtcatcatcatctatgccattattggcctggagcttttcatcggtaaaatgcat
gcaacctgctatataggcggcacagatttgatagcagaggatgatccagctccctgcgcg
atctcagggcacgggcgccaatgccccatcaacggcacacagtgcagagaaggctggcac
ggccccaacgggggcatcaccaacttcgacaactttctgtttgccatgctgacggtgttt
cagtgcatcaccatggagggctggacggacgtgctctactggatgaacgatgctatgggc
tttgagcttccatgggtttactttgtcagtcttgtgatcttcggctcctttttcgttctt
aacctggttttgggtgtgttgagcggagagttctccaaggagagagagaaagctaaagct
cgaggagacttccagaagctgcgtgagaagcagcagctggaggaggacctgaagggctac
ctggactggatcactcaggctgaagatattgaccctgacaacgaggacgaggctgaggag
gggagcaagcgaaaccgggtgactctggctgacctcaccgagaagaagaaaggaaggttt
gggtggttcagccagtcgtccgacactcatgcgagcgttccagccagcgaaacagagtct
gtgaacaccgagaatcagaacggagaggatgaaaagacaccctgctgtggacctttgtgt
cagaaaatctcaaagtcaaagttcagtcggcgctggcgtcgctggaacaggttctgccgc
aggaagtgccgtttggctgtgaagtcagtacctttttactggctggtcatcatcctggtg
ttcctcaacacactcaccatctcatcggagcattacaaccagcctatgtggttaacacaa
gttcaggatgtggcgaacaaggtgctgctggccctcttcacatgtgaaatgttggtgaag
atgtacagtctgggactccaagcctactgtgtgtccttgttcaaccgctttgactgcttt
gtggtgtgcggaggaatcaccgaaaccattctggtcgagctggaaatcatgtctcctctt
gggatttctgtgtttcgctgtgtccgtctcctgaggatctttaaagtcacgcggcactgg
cagtctctgagtaacctggtggcatcgctgctcaactcgatgaaatctattgcttccctg
ctgctgctcctcttcctcttcatcatcatcttctccctgctgggcatgcaggtgtttggt
gggaagttcaactttgacgaaacccagacgaagagaagcacctttgacaactttccccaa
gcccttctcaccgtgtttcagatcctgactggagaagactggaacgctgtcatgtatgat
gggatccaggcgtacggaggcccctcctcctccgggatggtcgtgtgtttttacttcatc
attctcttcatatgcggaaactatatcctcctgaatgtcttcttggccatcgctgtggac
aacctggcagatgcagaatcactcaacacagatgaaggagacaaaaaagaggacaaaaag
gatgatgacaaagatgaaaaggaagaagaggaagaggacaatgatgacaatggaggagat
gaggaagacccagaggttccatcaggtcctcggccggtcatcgctgacctggtaaagaag
gaaaagatcattccgatcccagagggaagtgccttcttcatcttcagtaacacaaacccg
gtgcgagtgttttgtcaccaactcatcaaccaccacatattcaccaacctcatcctggtg
ttcatcatgctcagctcggtgtcgctcgctgccgaagacccgatccggaacttctccgcc
cgcaacattatacttggttactttgactatgctttcaccgctatctttactgttgagatc
gtgttgaaggtcctaggctatgcagattatgtcttcactagtatgtttacatttgagatc
gtattgaagatgacaacatatggagcttttctccataagggagcattctgcaggaattac
tttaacctcctggatctcttggtggtcggggtttctcttgtctcctttggcattcagtct
tcggccatctccgtggtgaagattctccgagttcttcgagtgcttcgacccctgagggcc
atcaatagagccaagggccttaaacatgttgtccagtgtgtctttgtggcaatcagaact
attggcaacatcatgattgttaccactctacttcaatttatgttcgcttgcataggtgtc
cagctatttaagggaaaattttaccgctgcacagatgaggccaagtccagtccagaagaa
tgcaaaggcacatacatcctgtataaggatggagatgttaaccagccgacgatccacagg
cgggtgtggcacaacagcgacttcaactttgacaatgtcctcatggccatgatggccctc
tttactgtttccacatttgaaggctggccggcgttgctgtacaaagccatcgactccaac
agggagaatctgggacccatttacaactaccgtgtggaaatctccatcttcttcatcatc
tacatcattatcattgctttctttatgatgaacatctttgtgggttttgtcatcgtcaca
tttcaagaacaaggagagaaggagtataaaaactgtgaacttgacaagaaccagcgtcag
tgcgtggagtatgctctaaaggcccgtcccctgaggagatatattcccaagaacccatac
cagtacaagttttggtatgtggtgaactccactggctttgagtacatcatgtttgtgctc
atcatgctcaacacgctctgcttggctgtgcagcactatggccaatcagcgctttttaat
tatgtaatggacattctcaatatggttttcactgctgttttcactgtggaaatggttctc
aagctcatcgcattcaaaccaaggcactattttgctgatgcttggaacacatttgatgcc
ttaattgttgttggtagcgtcgtcgatattgctatcactgaagttaacccaacggagact
cctcaggtggatgagatggggaacacggaggacagtgctcgcatctccatcactttcttt
cgcctgtttcgcgttatgcggttggtcaaactcctcagcagaggagagggtatccgcaca
ttgctgtggactttcattaagtccttccaggctttaccatacgttgctctattgatagcc
atgttgtttttcatctacgctgtcatcggcatgcaggttttcggaaagattgccatggtc
gatggaactcaaattaacagaaacaacaacttccagaccttcccccaggctgtgctcctt
ctttttaggtgtgccacaggtgaggcgtggcaggatataatgttggcctgtatgcccggg
aaactgtgtgacccagagtctgactacaaccccggggaggagatgacttgtggcagtgga
tttgcaatcatttatttcattaccttctacatgctctgtgctttcttgatcatcaatttg
tttgtggccgtcattatggacaactttgactacttgacacgtgattggtcaattcttggt
cctcaccacctggatgaatttaagaggatttggtcagagtatgatcctgaggcaaaagga
aggatcaaacatctcgatgtggtgacattgcttcgtcgtatccagccccctcttggattt
ggtaaactgtgtcctcacagagtagcatgcaagcggctggtggccatgaacatgcctctc
aacagtgatgggacggtcatgtttaatgctacactgtttgccctggtgcgcacggctctg
aaaataaaaaccgaaggtaacctggaacaggccaatgaagagctgcgagccgtcatcaag
aaaatctggaagagaactagcatgaagcttctggaccaagtggtgcctcctgctggtgat
gatgaggtaaccgtggggaagttctatgccaccttcctgatacaggactactttaggaaa
ttcaagaaacgtaaagaggaaggcctggtgactgcgcacccttcccagaacaacacagcc
attgccctgcaggctggccttcgcacgctgcatgatattgggcctgaaattcgccgagcg
atatcatgtgacctgcaggatgacgagctagttgactttattccagaggaagacgaggaa
atatataggcgtaacggcggcctcttcggtaaccacctaatgaacggcggtcatcggcga
gccaacggccatcaaaccaacaccacacagcgccccctgcaggtgcagcccccgcctcac
tatgctcacatggagcagccagtggggcgtctttctcgagctaatgcaatggctcacccc
aaccaccatcatcaccatcaccacaatcatcaccgccaccacaactcctacggcaaatct
cctaaatccaccaacatcaacttgaacaacgccaacatgtccagcctgcccaacggagga
caccatatctactacgagcgcgctcctccaaacggatacccaggtttacgcacctcctac
tacgactataacaagccacggacgccccagggtcaaagaaggcgctactatgagacgtat
gttaggtcccagagaggagacggccatcaccccaccatccgcagggaagaggagattgat
gaggatcgcttctctggggaatatttcagcggagaggagttttatgaggaggacagcatg
ttgtcaggggacagatatcagaccagtgacacggagtatgaaactccgaaaggctaccat
caccctgacagttactatgacgatgatgagcagcctctctaccgggactcacggaggtca
ccaaagagaagactgcttcctgccacacctcaaggtcacaggaggccttcctttaacttt
gagtgtttgcgcagacaaagtagccaggatgagcttccacatcagcgtaccgctctacca
ctgcaccttatgcagcatcaggtaatggctgtagcaggcctggactccagcagagcccac
tgcctctcccccacccgctccactcgctcctgggccacccctccagccaccccagccagt
aaagaccagtcgccgtactacacccccctcatccgcgtggaccgtccacacagggagagc
atctctggcagccacgtgtctgtgcgcaagagctcctggtacacagacgatccagagtat
tcccaaaggacgtattcgcccatccacctgcaggttcccccggagtaccaccaccagtac
caccagaagaggggcagcgccaccagccttgtagaagcggttttgatatcagagggtctc
gggagatacgccaaggatcccaagtttgttgctgccacaaagcacgagatagcagatgca
tgtgagatgacaatagacgagatggagagtgcagccagccacctgctgagcgaagggatc
gctcccggcatcaacggggtcaacgtgttcccccttctggcccccagggattacgagctg
ccggacaccggagccagttacagtgacgaggagccagagaccgaacccagagctccttac
gaggaggacctggcagatgagatgatctgcattacgactttatag
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integrated database retrieval system
