Gambusia affinis (western mosquitofish): 122833413
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Entry
122833413 CDS
T07758
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00450
Selenocompound metabolism
gaf00970
Aminoacyl-tRNA biosynthesis
gaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
122833413 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122833413 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gaf01007
]
122833413 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122833413 (mars1)
Enzymes [BR:
gaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
122833413 (mars1)
Amino acid related enzymes [BR:
gaf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122833413 (mars1)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122833413 (mars1)
Prokaryotic type
Other AARSs
122833413 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C
GST_C_3
GST_N_2
GST_C_2
GST_N_3
tRNA-synt_1e
HTH_23
Motif
Other DBs
NCBI-GeneID:
122833413
NCBI-ProteinID:
XP_043976848
LinkDB
All DBs
Position
LG07:complement(21192256..21207764)
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AA seq
921 aa
AA seq
DB search
MELFVSEGNPHCLKVLAALEVTGVQCGVQFINHEGKVVPFLPRPAVPTLFLPSGQHLFSS
NTICRYLFELNGPESSDQCNQWLEWEATILQPALLRALHLAVLQGKGSEVPKVLQGPLNV
LDQSLAKGSTAYLTGEVVSVADVVLWGALYPVLSVSSLVLSDHKSVKAWFDRVAAVRGCQ
SAAQKVLQGKGLEAMKSYMQKQPAPQSRDTQPCNSSPAETDEGERNVSEEEMEAAALTWS
KDLNACSHPAEKQHPVMPQEGNRNVLITSALPYVNNVPHLGNIIGCVLSADVFSRYGQLR
GWNVLFVCGTDEYGTATENKAREEGLTPQQICDKYHAVHSSIYKWFQIDFDFFGRTTTEK
QTEIAQDIFWRLHKNGFLVEDTVEQLRCENCQRFLADRFVEGMCPHCSYPEARGDQCDKC
GRLINAVELREPQCKVCRQTPEIRSSKHLFLDLPKLETELENWLERSTSSGDWTANAKQI
TRSWLRDGLKPRCITRDLQWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTNEWEKWWK
NPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVSHLIATEYLNYEDTKFSKSRGIG
VFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRGGMFV
TKFFGGCVPAMELLQEDKKLLAVVGWELQQYIQLMDKVKIRDALKHILNISRHGNQYIQV
NEPWKKIKGGESERQRAGTVTGVSVNIACLLSVMLMPYMPAVSQTIRDQLNAPQTCINTM
LQGPGTFVCALRAGHRIGTVSPLFQKLEADQIEALKKRFGGQQPEDEPSNKKITASTQPA
AVPAPPVVAEVKVVNGSDPEKAKQLAEAVAEQGDKVRALKSQKAEKAIITAEVSKLLDLK
KQLAVAEGKSPEPAPQKGKKK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtttgttagtgaaggcaacccgcattgtctgaaggtgttagctgcactggaa
gtaactggagttcagtgcggcgttcagttcatcaaccacgaagggaaggtggtgcctttc
ctcccccgtccagctgtgcctactctttttctacccagtgggcagcaccttttcagctcc
aacactatttgcagatacctgtttgagttaaatggaccagaatccagtgatcagtgcaat
cagtggcttgagtgggaagccacaattctccagcctgcactgctacgggctcttcacttg
gcagtgcttcagggaaaagggtcagaggttcccaaagttctccagggtcccctaaatgtc
ttggaccaaagtttggccaagggcagcacggcatatttaactggggaagttgtttcagtt
gctgatgttgttttatggggtgccctgtaccctgttttatccgtctcttctctagtattg
agtgatcataaatcagtaaaggcttggtttgaccgtgttgctgcggtgcgcggctgtcag
tctgcagctcagaaagtgctgcagggaaaaggcctggaggccatgaagagctacatgcag
aagcagcctgcacctcagagcagagacacacagccatgcaacagcagccctgctgagact
gatgaaggtgagcgtaacgtttcagaagaggagatggaagcagcggctctcacctggagc
aaggatttaaacgcctgctcccatccagctgaaaagcaacatccagttatgccacaagag
ggcaaccggaatgtcctcatcaccagcgccttgccatatgtcaacaatgtcccccacctg
ggtaacatcattggctgtgtcctcagtgcggatgttttctccagatacggccagctgcga
gggtggaatgtgttgtttgtctgtggcacggatgagtacggcacggctaccgagaacaag
gctagagaggaaggcctgacaccgcagcagatctgtgacaagtaccatgctgttcattcc
agtatctacaaatggttccagattgactttgacttcttcgggagaaccaccactgagaag
cagacggagattgctcaggatatattctggcgactccacaagaatggatttcttgttgaa
gacacggtggaacagcttcgttgtgaaaactgtcagcgcttcctggctgaccgctttgta
gagggaatgtgtccccactgcagctatccagaggctcgcggtgaccagtgtgacaagtgt
gggcgcctcatcaacgccgtggagctcagggaacctcagtgcaaagtctgcaggcagact
ccagaaatccgctcctctaaacatctcttcttggacctgccaaagctagaaactgagttg
gagaattggctagagagatcaaccagctctggagactggacagcaaacgccaaacagatc
actcgctcctggctaagagatggactcaagcctcgctgcatcaccagggacctgcagtgg
ggaacaccagtacctcacccagactttaaagagaaggtgttctacgtttggttcgatgct
cctattggttatctgtctattactgccaactacaccaacgaatgggaaaagtggtggaaa
aatccacatcaggtggagctgtacaacttcatggcgaaggacaatgtgccgttccacagt
gtggtgtttccctgctccctactgggagcccaggacaactacactctggtcagccatcta
attgctacagaatatctgaattatgaggacacaaagttctcaaagagccgtggtatcggt
gtgttcggtgacatggcgaaggacacgggcatcccttcggacgtatggcggttctacctc
ctgtatgtgcgtccagaaggacaagattcagctttttcttgggctgacatggccctaaag
aacaactctgagctgctcaacaatttggggaacttcatcaacagaggtgggatgtttgtg
accaagttttttggaggatgcgtgcctgcaatggagctactgcaggaagacaagaagctt
ctggctgtggtgggctgggagctgcagcagtacatccagcttatggacaaagtcaagatc
cgcgatgccttgaaacacatcctgaacatttctcgccatggtaaccaatacattcaagtc
aatgagccctggaagaaaataaagggaggagagtcagaaaggcagcgcgccggcaccgtg
acgggcgtttctgtgaatatcgcctgcttgctgtcggtgatgctcatgccttacatgcca
gcggtcagccagaccatcagggatcagctcaacgctcctcagacttgcatcaataccatg
ttgcaaggccccggcaccttcgtgtgcgccctgagagcgggccaccgcatcggcactgtc
agtccgttattccagaaactggaggcggatcagatcgaggctttgaagaagaggtttggt
ggacagcagccagaagacgaaccatctaataagaagattactgctagcactcagcccgct
gcggttcctgctcctcccgttgttgccgaggtgaaggtggtcaacggatcggatcccgag
aaagccaagcagctggcggaagctgtagcagaacagggtgacaaggttcgagcacttaaa
tcccagaaagcagaaaaggctataatcacagcagaggtttccaaacttttagaccttaag
aaacaactggctgttgctgaagggaagagcccagagcctgcacctcagaagggcaagaag
aagtga
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