Gambusia affinis (western mosquitofish): 122833436
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Entry
122833436 CDS
T07758
Symbol
si:dkey-28n18.9
Name
(RefSeq) sorting nexin-6 isoform X1
KO
K17920
sorting nexin-5/6/32
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122833436 (si:dkey-28n18.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122833436 (si:dkey-28n18.9)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122833436 (si:dkey-28n18.9)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Macropinocytosis
Sorting nexins
122833436 (si:dkey-28n18.9)
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122833436 (si:dkey-28n18.9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
DUF2229
CENP-T_C
HNOBA
Motif
Other DBs
NCBI-GeneID:
122833436
NCBI-ProteinID:
XP_043976903
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All DBs
Position
LG07:complement(12899520..12906082)
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AA seq
436 aa
AA seq
DB search
MSLWDRVHFDPEDILCLLSSRRLKHKQTKDHFSFCAFCSARKEDLNRISFYKSREKLSLK
EQIKGLKMMEEVNEETSVLSVHGHTIKVTEVSQDGDTLTFIIVSQKLSGTGEYHVDRTYD
DFEWLQQHLFSQEGVPGIQGVIFPPLPARPQVNASVKAIKQLGFLGLGEWQPYCKALETF
LRQVAVHSILSKNKAVEVFLTSTEPPGRQKVRRNIFNRLSQAVEEMRKEGHKDVDEFFQT
ERDHNLVLTGHTRMAGEKFLDVVLTEQKIAVACGHFAAALHLCVENGEDPEKRAFSRVCV
KLSEVFDSIKKNMMSVAVNDMNTLGLGLDLDLRTQEAEKEMLFRRTCKLVELENARKNAE
KAKPVKKNAMEEVKKAAEEEFEQICKVAKQEIVHLSQDRVGMVQKSLIQWCEQQLQTAKE
GADVFNQHLQAFKAMA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctgggacagagtgcactttgacccagaggatatcctgtgccttctcagcagc
agacgactgaagcacaagcagacaaaggatcattttagtttttgtgctttttgtagtgca
aggaaagaagatttaaatagaatttctttttacaaaagcagagaaaaattgagccttaaa
gaacaaattaaaggtctgaagatgatggaagaggtgaacgaggaaacttctgtcctgagc
gtccatggacataccatcaaagttacagaagtctcgcaggacggggacacacttaccttt
ataattgtttctcaaaagctgtctgggacaggagagtaccatgtggaccggacctatgat
gactttgaatggcttcagcagcatctgttctctcaggagggtgttcctgggatacaagga
gtcatattcccccctcttccagcgaggcctcaggtgaatgcatctgtgaaggccataaaa
cagcttggatttcttgggttaggagagtggcagccgtactgcaaagctctggaaactttc
ctcaggcaggttgctgttcacagcatactcagcaaaaacaaagctgtggaggtcttcttg
acaagtactgaacctccaggcagacaaaaagtcaggagaaacattttcaaccgtctgagt
caagctgtggaagaaatgaggaaagaaggacataaggacgtagatgagttttttcagacg
gaacgtgatcataaccttgttctaactggacataccaggatggcgggggaaaaattcctc
gatgtggtgctaactgagcaaaaaatagctgtggcctgtgggcactttgctgctgctctg
cacctctgtgttgaaaacggagaggatccagaaaaaagggctttttctagagtttgtgtg
aaattatcagaagtattcgactctataaagaaaaatatgatgagcgttgctgtgaatgac
atgaacactctcggtctgggtctggacctggacttgcgaacccaagaggcagaaaaggag
atgctcttcagaagaacctgcaaactggtggagctggaaaatgcccgcaagaacgcagag
aaggccaaacctgtgaagaagaatgctatggaggaggtgaagaaagcagcagaggaagag
tttgagcagatctgtaaagttgcaaagcaagagattgtccatctgagtcaggaccgggtg
ggaatggtgcagaaaagtctgattcagtggtgtgagcagcagcttcagacagccaaagaa
ggtgctgacgttttcaaccagcacctgcaagccttcaaagcaatggcctaa
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