Gambusia affinis (western mosquitofish): 122833443
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Entry
122833443 CDS
T07758
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
KO
K14961
COMPASS component SWD1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122833443 (rbbp5)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
122833443 (rbbp5)
COMPASS/SET1 complex (yeast)
122833443 (rbbp5)
MLL-HCF complex
122833443 (rbbp5)
MLL3/MLL4 complex
122833443 (rbbp5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_EML
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_LRRK2
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR54
Beta-prop_WDR11_1st
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
122833443
NCBI-ProteinID:
XP_043976919
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Position
LG07:complement(27597533..27605903)
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AA seq
563 aa
AA seq
DB search
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQYHPRDI
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
NTQELVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTTVDPIVAFCSSDEELEDNKALLYLPIAPEVEDPEENPFGPPP
DTSVPTGAPDDALPGGDKKQRQPSSEGGPAKKKARTTTIELQGVPSDEVHPLLGVKGDSK
SKKKTAGRPKGSKGKDKDFSFRPKPYKGERPPFPMGPEALSSSGLGGGGGGGEGGMKVRA
EGALAPGSLVSQAFKQHNIGGMD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgagctgctcgaatcgttcgggcagaactacccagaggaggcagatggcacc
ctggactgcatcagcatggcgctcacctgcaccttcaaccgctggggcaccctgctggcc
gtgggctgcaacgacggccgcatcgtcatctgggacttcctcactcgtggaatcgctaag
atcatcagcgcacacattcaccccgtctgctccctgtgttggagtcgagacggacacaag
ctggtgagcgcctcgacagacaacatcgtctctcagtgggacgtcctgactggagactgc
gaccagaggttccgcttcccgtcccccatcctcaagctgcagtaccatcccagagacata
gacaaggtgctggtttgtcccatgaaatcagctccggtgctgctgacgttatcagactcg
aagcacgtggtgctgcctgtggacgacgactcggatttgaacgtggtggcggcgttcgac
cggcggggggaatatatttacaccggcaatgccaaaggaaagattctggtgttaaacacc
aacactcaggagctggtggcgtccttcagagttacgaccggcaccagtaacaccaccgcc
atcaagtccatagaattcgctcgaaagggcagctgcttcctgataaacacagccgacagg
atcatcagggtttacgacggcagagagatcctgacctgcggccgggacggcgagccagaa
cccatgcagaagctacaggatctggtcaacaggactccgtggaagcgctgctgcttctcc
ggcgacggcgagtacatcgtggccggctcggcccggcagcacgccctctacatctgggag
aagagcatcgggaacctggtgaagattctgcacggcacccgaggggagctgctgctggac
gtggcgtggcatcctgttcgacccatcattgcctccatctccagtggagtggtgtccatc
tgggcccagaaccaagtggaaaactggagcgcttttgctccagacttcaaagagttggat
gagaacgttgagtatgaggagcgggagtctgaatttgacattgaggatgaagacaaaagc
gaaccggagcagacgggcgcagacgctgctgaggatgaggaggtggacgtgaccacggtg
gatcctatcgttgctttctgcagcagtgacgaggaactggaggacaacaaggccctgctg
tacctgcccatcgcccctgaggttgaggatccagaggagaacccatttgggccgccgccg
gacacctcggtgccgaccggcgccccggacgacgcgctgccaggcggcgacaagaagcag
aggcagccgtcgtctgaaggggggccggccaagaagaaggcccgcactaccaccattgaa
ctgcagggggtgcccagcgacgaagtgcaccccctgctgggtgtgaagggggacagcaag
tccaagaagaagacagcaggtcggcccaaaggctccaaaggtaaagacaaagacttctcc
ttcaggccgaagccctacaagggcgagcggcccccgttccccatggggcccgaggccctg
agcagctctggcctggggggaggaggaggaggaggagaaggagggatgaaggtcagggca
gagggggccctggcaccagggagtctggtctctcaggcgttcaagcagcacaacatcggt
gggatggactga
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integrated database retrieval system
