Gambusia affinis (western mosquitofish): 122833450
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Entry
122833450 CDS
T07758
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03013
Nucleocytoplasmic transport
gaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122833450
03015 mRNA surveillance pathway
122833450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122833450
Enzymes [BR:
gaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122833450
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122833450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
122833450
NCBI-ProteinID:
XP_043976926
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All DBs
Position
LG07:15289664..15297605
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AA seq
488 aa
AA seq
DB search
MASESWAQAVDEQEAAAESINNLQIKEKPEENGTVSNATNSSSGAAKSEAGGNAKPADDD
DKEDKAAQSLLNKLIRNNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYAMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKYPQCLCVSPT
YELALQTGKVIEQMGKYYPEVKLVYAIRGNKLERGSKLQEQIVIGTPGTMLDWCNKFRFI
DPKKIRVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEESVWNFAQRIVPE
PNIIKLKREEETLDTIKQYFVLCNSREEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQDHFNKKIERLDTDDL
DEIEKIAN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagagtcgtgggcgcaggccgtggatgagcaggaagccgcggcagaatcgatt
aataatcttcagataaaagagaaaccagaagaaaatggtactgtttcaaatgccacaaac
tccagcagcggggctgcaaaatcagaagctggaggtaacgccaaacctgcagatgatgac
gacaaggaggacaaagcagcacaatcgctgttgaacaagctgatacggaataatctcgta
aatacgacaaatcaagtggaagttctccagaaggatccaaactctccactatactctgtg
aaatcctttgaagaactacgcctcaaaccacagcttcttcagggtgtatatgccatgggg
ttcaatcgaccatctaaaatccaggagaccgccttacccatgatgctggcagagcctcca
cagaacctgattgctcagtctcagtcagggacaggaaaaacggccgcctttgtcctggcg
atgctcagccacgtcgaccccaacaacaaatatccacagtgtttgtgtgtgtcaccaaca
tacgaactggcacttcagaccggcaaagttatcgaacagatgggcaaatattatcctgaa
gtcaaactagtctacgccattagaggaaacaagttggaacgaggcagtaaactgcaggaa
cagatagttattgggacacctggtacaatgctggactggtgcaataaattccggtttata
gatcccaagaagatcagggtgtttgtgttggacgaagccgacgtcatgatcgccacgcag
ggacaccaggaccagagtatccgaatccagaggatgctgcccaagaactgccagatgttg
ctgttctcagctacgtttgaagagagcgtttggaacttcgcgcagcgcatcgtgcccgaa
cccaacatcatcaagctgaagagagaggaggagactctggacaccatcaagcagtacttt
gtgctctgcaacagcagagaggagaagttccaagctctctgtaacatctacggagccatt
acaattgctcaggccatgatcttctgccatacgagaaaaactgcaggttggcttgcaggg
gagctgtccagagaaggccaccaggtggcgctgcttagtggagaaatgcaagtagagcag
agagcggccgtcatagaccgcttccgagatggaaaggagaaagtcctggtgaccacaaat
gtctgtgctcgaggcattgatgtggagcaggtttctgtggtgatcaatttcgacttgcca
gtcgacaaagatggcaacccagacaacgagacatacctgcacaggattgggcgtaccggc
cgatttgggaagaggggactggccatcaacatggtggacagcaagatgagcatgaacatc
ctcaacaggatccaggaccattttaataagaaaattgaaagactagatacagatgatctg
gatgaaattgagaaaattgccaactaa
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